Commit graph

34769 commits

Author SHA1 Message Date
Massimiliano Culpo
e32009a7e3
openscenegraph: fix self-referential dependencies (#42541) 2024-02-07 16:53:44 +01:00
Massimiliano Culpo
b0f3489d68
py-*: fix self-referential dependencies (#42548) 2024-02-07 16:52:26 +01:00
simonLeary42
9099e4c233
libcatalyst cmake_minimum_required (#42532)
d469357740
2024-02-07 16:10:46 +01:00
Vanessasaurus
a1b895e547
flux-core: add v0.59.0 (#42536)
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2024-02-07 16:10:05 +01:00
Vanessasaurus
df1ff0affa
flux-pmix: add v0.5.0 (#42537)
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2024-02-07 16:09:34 +01:00
George Young
95e828f3d8
s4pred: add new package (#42520) 2024-02-07 16:05:14 +01:00
Rocco Meli
a28c6caac0
dbcsr: examples variant (#42543) 2024-02-07 15:54:19 +01:00
Rocco Meli
514260d8cb
cp2k+mpi requires dbcsr+mpi (#42545) 2024-02-07 15:35:20 +01:00
Massimiliano Culpo
642ec1918f
julia: fix self-referential dependencies (#42486) 2024-02-07 08:46:03 +01:00
Massimiliano Culpo
bdae9f776b
netcdf-c: fix self-referential dependencies (#42528) 2024-02-07 08:22:56 +01:00
Massimiliano Culpo
5c86a3cca2
lammps: fix self-referential dependencies (#42521) 2024-02-07 08:22:11 +01:00
Massimiliano Culpo
ea53008604
molgw: fix self-referential dependencies (#42523) 2024-02-06 19:01:44 +01:00
Massimiliano Culpo
01ea8f46e7
ldak: fix self-referential dependencies (#42522) 2024-02-06 17:45:40 +01:00
jalcaraz
ff1e700b56
TAU: Added new test for other variants. (#42503)
Now it tests all GPUs, syscall and python.
2024-02-06 08:37:22 -08:00
renjithravindrankannath
5efa723289
mesa: updating llvm dependency for version 23 (#42481) 2024-02-06 14:53:31 +01:00
Massimiliano Culpo
4985f87a52
dbcsr: fix self-referential dependencies (#42482) 2024-02-06 14:41:27 +01:00
Massimiliano Culpo
ae000f963c
hpx: remove self-referential dependencies (#42485)
This shouldn't be an issue, but avoid self references
on "^asio".
2024-02-06 13:37:40 +01:00
Olivier Cessenat
0960f691a1
keepassxc: new version 2.7.6 (#42478)
AUTOTYPE is set by default in the 2.7.6 release, it was not previously.
2024-02-05 18:24:42 +01:00
Mosè Giordano
713b19cac7
py-pythran: apply patch to fix compilation with GCC 13 (#42490)
* py-pythran: apply patch to fix compilation with GCC 13

* Update var/spack/repos/builtin/packages/py-pythran/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-05 09:08:41 -07:00
Thomas Madlener
05f1f07e51
edm4hep: add v0.10.4 (#42488) 2024-02-05 07:43:51 -07:00
Mosè Giordano
955a01dfa4
hh-suite: apply patch to fix compilation with GCC 13 (#42489)
This fixes errors like
```
     294    In file included from /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.cpp:8:
  >> 295    /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.h:37:37: error: 'uint16_t' has not been declared
     296       37 |   void writeU16(std::ostream& file, uint16_t);
     297          |                                     ^~~~~~~~
  >> 298    /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.h:38:28: error: 'uint16_t' has not been declared
     299       38 |   void readU16(char** ptr, uint16_t &result);
     300          |                            ^~~~~~~~
  >> 301    /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.h:40:37: error: 'uint32_t' has not been declared
     302       40 |   void writeU32(std::ostream& file, uint32_t);
     303          |                                     ^~~~~~~~
  >> 304    /build_stage/spack-stage-hh-suite-3.3.0-4kkv3zqhcadpubeo63l73xq3shr7gjmh/spack-src/src/a3m_compress.h:41:27: error: 'uint32_t' has not been declared
     305       41 |   void readU32(char**ptr, uint32_t &result);
     306          |                           ^~~~~~~~
```
2024-02-05 07:38:49 -07:00
Massimiliano Culpo
928ee7569c
ecp-data-vis-sdk: remove self-referential dependencies (#42484)
This shouldn't be an issue, but express this limitation
with a conflict.
2024-02-05 15:17:46 +01:00
George Young
8190903821
motioncor2: add v1.6.4 (#42380)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2024-02-05 14:32:38 +01:00
George Young
473347df41
kentutils: update to @459, update download location & deps (#42448)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-02-05 04:23:33 -07:00
Adam J. Stewart
1ef52d7c8e
py-pytest: add v8.0.0 (#42344) 2024-02-05 12:16:58 +01:00
Tom Payerle
561fe13bad
cgal: add v5.3.2 (#42378) 2024-02-05 12:08:27 +01:00
George Young
c15ed38cef
star: updating to 2.7.11a (#42011)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-02-05 12:06:01 +01:00
David Boehme
fa4568d9c9
kripke: add adiak dependency with Caliper enabled (#42414) 2024-02-05 11:17:24 +01:00
Nathalie Furmento
ef4f78a6cd
starpu: add release 1.4.4 (#42446) 2024-02-05 11:12:50 +01:00
Adam J. Stewart
da36d069db
py-lightly: fix conflict definition (#42449) 2024-02-05 11:11:23 +01:00
Cameron Rutherford
6ff3e17a7d
hiop: require RAJA when cuda is enabled (#42407) 2024-02-05 11:04:08 +01:00
snehring
bb200be57d
sentieon-genomics: add new version 202308.02 (#42465) 2024-02-05 11:01:00 +01:00
Olivier Cessenat
a238563fdb
mpfr: add v4.2.1 (#42479) 2024-02-05 02:59:22 -07:00
Adam J. Stewart
bfc6f1d2a9
py-lightning: add v2.1.4 (#42468) 2024-02-05 10:59:00 +01:00
Olivier Cessenat
99b8a08366
stripack: sets the licence SPDX (#42473) 2024-02-05 10:45:23 +01:00
Olivier Cessenat
dba5ae939d
visit-ffp and visit-unv: sets the licence SPDX (#42474) 2024-02-05 10:42:07 +01:00
Olivier Cessenat
7a4aa823d1
ngspice: new version 42 (#42475) 2024-02-05 10:41:06 +01:00
Olivier Cessenat
89e387cb67
latex2html: new version 2024 (#42476) 2024-02-05 10:38:24 +01:00
Olivier Cessenat
19c46de69f
nlopt: new version 2.7.1 (#42477) 2024-02-05 10:27:01 +01:00
Michael Kuhn
e35fbfab77
gtkplus: add v3.24.41 and fix CUPS problems (#42480)
Fixes #42297
2024-02-05 10:23:57 +01:00
Massimiliano Culpo
478203dc68
asio: remove self-referential dependencies (#42469)
These shouldn't be an issue, but they can be expressed
in terms of variants on the package.
2024-02-05 10:10:58 +01:00
Massimiliano Culpo
5713ffd143
converge: fix self-referential dependencies (#42471) 2024-02-05 10:03:20 +01:00
Elsa Gonsiorowski, PhD
1711b6dee1
scr: fix @develop dependency versions (#42379) 2024-02-05 09:15:19 +01:00
Massimiliano Culpo
7fbd4afaaa
cp2k: fix self-referential dependencies (#42472) 2024-02-05 09:12:47 +01:00
Massimiliano Culpo
f396dbcb4f
berkeleygw: fix self-referential dependencies (#42470)
Also, remove a couple of duplicate directives
2024-02-05 09:04:32 +01:00
David Guibert
57fe3430fd
py-pymummer: init (#42412)
* py-pymummer: init

* Update py-pymummer copyright date

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-04 06:27:46 -07:00
snehring
8428bef040
py-ete3: adding version 3.1.3 (#42462) 2024-02-04 06:12:19 -06:00
George Young
47c91c9163
ldsc: new package @2.0.1 (#42430)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2024-02-04 06:06:45 -06:00
David Guibert
6c57360eac
py-pyfastaq: init (#42413) 2024-02-04 05:50:44 -06:00
George Young
624292d685
sicer2: new Python package @1.0.3 (#42383)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2024-02-04 05:17:27 -06:00