Deleted Open MPI sit class files except the latest in a release series.
This commit is contained in:
parent
f8a8aecb10
commit
d42f0c8b88
7 changed files with 0 additions and 506 deletions
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@ -1,49 +0,0 @@
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#!/bin/sh
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# sit class file
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#
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# Christoph Niethammer <niethammer@hlrs.de> (C) 2015
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#
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CATEGORY="mpi"
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PACKAGE="openmpi"
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VERSION="1.10.0"
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URL="http://www.open-mpi.org"
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INSTALLER="Christoph Niethammer <niethammer@hlrs.de>"
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# Archive A and package name P
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A=${PACKAGE}-${VERSION}.tar.bz2
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P=${PACKAGE}-${VERSION}
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HASH_MD5=10e097bfaca8ed625781af0314797b90
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HASH_SHA1=47e1b9acfd87fedea6cfdeea4c2c7f6db1ddf397
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enable_cuda=1
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# Other interesting configure options:
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# --enable-mpi-threads
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# --enable-progress-threads
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CONFIGURE_OPTS="
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--with-devel-headers \
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--enable-contrib-no-build=vt
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--enable-shared \
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--enable-static \
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--enable-mpi-fortran=usempif08 \
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"
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if [ $PLATFORM = "hornet" ] ; then
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CONFIGURE_OPTS="$CONFIGURE_OPTS --with-platform=lanl/cray_xe6/optimized-nopanasas"
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fi
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if [ $enable_cuda != 0 ] ; then
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module load cuda
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CONFIGURE_OPTS+=" --with-cuda=$CUDA_DIR"
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fi
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if [[ -d /opt/voltaire/fca ]]; then
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echo "Voltaire FCA found"
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sit_info "Enabling Voltaire FCA (/opt/voltaire/fca)"
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CONFIGURE_OPTS+=" --with-fca=/opt/voltaire/fca"
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fi
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src_pretest() {
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make check
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}
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@ -1,49 +0,0 @@
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#!/bin/sh
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# sit class file
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#
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# Christoph Niethammer <niethammer@hlrs.de> (C) 2015
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#
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CATEGORY="mpi"
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PACKAGE="openmpi"
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VERSION="1.10.1"
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URL="http://www.open-mpi.org"
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INSTALLER="Christoph Niethammer <niethammer@hlrs.de>"
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# Archive A and package name P
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A=${PACKAGE}-${VERSION}.tar.bz2
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P=${PACKAGE}-${VERSION}
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HASH_MD5=10e097bfaca8ed625781af0314797b90
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HASH_SHA1=47e1b9acfd87fedea6cfdeea4c2c7f6db1ddf397
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enable_cuda=1
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# Other interesting configure options:
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# --enable-mpi-threads
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# --enable-progress-threads
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CONFIGURE_OPTS="
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--with-devel-headers \
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--enable-contrib-no-build=vt
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--enable-shared \
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--enable-static \
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--enable-mpi-fortran=usempif08 \
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"
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if [ $PLATFORM = "hornet" ] ; then
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CONFIGURE_OPTS="$CONFIGURE_OPTS --with-platform=lanl/cray_xe6/optimized-nopanasas"
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fi
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if [ $enable_cuda != 0 ] ; then
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module load cuda
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CONFIGURE_OPTS+=" --with-cuda=$CUDA_DIR"
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fi
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if [[ -d /opt/voltaire/fca ]]; then
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echo "Voltaire FCA found"
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sit_info "Enabling Voltaire FCA (/opt/voltaire/fca)"
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CONFIGURE_OPTS+=" --with-fca=/opt/voltaire/fca"
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fi
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src_pretest() {
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make check
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}
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@ -1,49 +0,0 @@
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#!/bin/sh
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# sit class file
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#
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# Christoph Niethammer <niethammer@hlrs.de> (C) 2015
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#
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CATEGORY="mpi"
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PACKAGE="openmpi"
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VERSION="1.10.2"
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URL="http://www.open-mpi.org"
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INSTALLER="Christoph Niethammer <niethammer@hlrs.de>"
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# Archive A and package name P
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A=${PACKAGE}-${VERSION}.tar.bz2
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P=${PACKAGE}-${VERSION}
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HASH_MD5=b2f43d9635d2d52826e5ef9feb97fd4c
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HASH_SHA1=03934fc0a2dd0d0d2d0459d714a976eabca938fb
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enable_cuda=1
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# Other interesting configure options:
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# --enable-mpi-threads
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# --enable-progress-threads
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CONFIGURE_OPTS="
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--with-devel-headers \
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--enable-contrib-no-build=vt
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--enable-shared \
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--enable-static \
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--enable-mpi-fortran=usempif08 \
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"
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if [ $PLATFORM = "hornet" ] ; then
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CONFIGURE_OPTS="$CONFIGURE_OPTS --with-platform=lanl/cray_xe6/optimized-nopanasas"
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fi
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if [ $enable_cuda != 0 ] ; then
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module load cuda
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CONFIGURE_OPTS+=" --with-cuda=$CUDA_DIR"
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fi
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if [[ -d /opt/voltaire/fca ]]; then
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echo "Voltaire FCA found"
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sit_info "Enabling Voltaire FCA (/opt/voltaire/fca)"
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CONFIGURE_OPTS+=" --with-fca=/opt/voltaire/fca"
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fi
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src_pretest() {
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make check
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}
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@ -1,49 +0,0 @@
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#!/bin/sh
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# sit class file
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#
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# Christoph Niethammer <niethammer@hlrs.de> (C) 2016
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#
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CATEGORY="mpi"
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PACKAGE="openmpi"
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VERSION="1.10.3"
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URL="http://www.open-mpi.org"
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INSTALLER="Christoph Niethammer <niethammer@hlrs.de>"
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# Archive A and package name P
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A=${PACKAGE}-${VERSION}.tar.bz2
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P=${PACKAGE}-${VERSION}
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HASH_MD5=b2f43d9635d2d52826e5ef9feb97fd4c
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HASH_SHA1=03934fc0a2dd0d0d2d0459d714a976eabca938fb
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enable_cuda=1
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# Other interesting configure options:
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# --enable-mpi-threads
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# --enable-progress-threads
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CONFIGURE_OPTS="
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--with-devel-headers \
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--enable-contrib-no-build=vt
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--enable-shared \
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--enable-static \
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--enable-mpi-fortran=usempif08 \
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"
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if [ $PLATFORM = "hornet" ] ; then
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CONFIGURE_OPTS="$CONFIGURE_OPTS --with-platform=lanl/cray_xe6/optimized-nopanasas"
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fi
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if [ $enable_cuda != 0 ] ; then
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module load cuda
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CONFIGURE_OPTS+=" --with-cuda=$CUDA_DIR"
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fi
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if [[ -d /opt/voltaire/fca ]]; then
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echo "Voltaire FCA found"
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sit_info "Enabling Voltaire FCA (/opt/voltaire/fca)"
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CONFIGURE_OPTS+=" --with-fca=/opt/voltaire/fca"
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fi
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src_pretest() {
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make check
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}
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@ -1,53 +0,0 @@
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#!/bin/sh
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# sit class file
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#
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# Christoph Niethammer <niethammer@hlrs.de> (C) 2016
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#
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CATEGORY="mpi"
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PACKAGE="openmpi"
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VERSION="2.0.0"
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URL="http://www.open-mpi.org"
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INSTALLER="Christoph Niethammer <niethammer@hlrs.de>"
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# Archive A and package name P
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A=${PACKAGE}-${VERSION}.tar.bz2
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P=${PACKAGE}-${VERSION}
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HASH_MD5=cdacc800cb4ce690c1f1273cb6366674
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HASH_SHA1=a34f07a0e94af4ccd8080d74827befd61824c6c3
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enable_cuda=0
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# Other interesting configure options:
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# --enable-mpi-threads
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# --enable-progress-threads
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CONFIGURE_OPTS="
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--with-devel-headers \
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--enable-contrib-no-build=vt
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--enable-shared \
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--enable-static \
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--enable-mpi-fortran=usempif08 \
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"
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if [ $PLATFORM = "hornet" ] ; then
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CONFIGURE_OPTS="$CONFIGURE_OPTS --with-platform=lanl/cray_xe6/optimized-nopanasas"
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fi
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if [ $enable_cuda != 0 ] ; then
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module load cuda
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CONFIGURE_OPTS+=" --with-cuda=$CUDA_DIR"
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fi
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if [[ -d /opt/voltaire/fca ]]; then
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echo "Voltaire FCA found"
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sit_info "Enabling Voltaire FCA (/opt/voltaire/fca)"
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CONFIGURE_OPTS+=" --with-fca=/opt/voltaire/fca"
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fi
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src_prepare() {
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patch -p1 < $SCLASS_DIR/$sit_classfile-0001.patch
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}
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src_pretest() {
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make check
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}
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@ -1,218 +0,0 @@
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From 4079eec9749e47dddc6acc9c0847b3091601919f Mon Sep 17 00:00:00 2001
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From: Nathan Hjelm <hjelmn@lanl.gov>
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Date: Mon, 8 Aug 2016 11:33:45 -0600
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Subject: [PATCH] pml/ob1: be more selective when using rdma capable btls
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This commit updates the btl selection logic for the RDMA and RDMA
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pipeline protocols to use a btl iff: 1) the btl is also used for eager
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messages (high exclusivity), or 2) no other RDMA btl is available on
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an endpoint and the pml_ob1_use_all_rdma MCA variable is true. This
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fixes a performance regression with shared memory when an RDMA capable
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network is available.
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Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
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---
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ompi/mca/pml/ob1/pml_ob1.h | 3 +-
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ompi/mca/pml/ob1/pml_ob1_component.c | 6 +++
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ompi/mca/pml/ob1/pml_ob1_rdma.c | 79 ++++++++++++++++++++++++++++++++----
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ompi/mca/pml/ob1/pml_ob1_rdma.h | 6 +++
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ompi/mca/pml/ob1/pml_ob1_recvreq.c | 2 +-
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5 files changed, 85 insertions(+), 11 deletions(-)
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diff --git a/ompi/mca/pml/ob1/pml_ob1.h b/ompi/mca/pml/ob1/pml_ob1.h
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index 1f78c51..8f0f510 100644
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--- a/ompi/mca/pml/ob1/pml_ob1.h
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+++ b/ompi/mca/pml/ob1/pml_ob1.h
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@@ -12,7 +12,7 @@
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* All rights reserved.
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* Copyright (c) 2010 Oracle and/or its affiliates. All rights reserved
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* Copyright (c) 2011 Sandia National Laboratories. All rights reserved.
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- * Copyright (c) 2012-2015 Los Alamos National Security, LLC. All rights
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+ * Copyright (c) 2012-2016 Los Alamos National Security, LLC. All rights
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* reserved.
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* Copyright (c) 2015 Research Organization for Information Science
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* and Technology (RIST). All rights reserved.
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@@ -61,6 +61,7 @@ struct mca_pml_ob1_t {
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int max_rdma_per_request;
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int max_send_per_range;
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bool leave_pinned;
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+ bool use_all_rdma;
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int leave_pinned_pipeline;
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/* lock queue access */
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diff --git a/ompi/mca/pml/ob1/pml_ob1_component.c b/ompi/mca/pml/ob1/pml_ob1_component.c
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index 5445f4b..e922c18 100644
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--- a/ompi/mca/pml/ob1/pml_ob1_component.c
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+++ b/ompi/mca/pml/ob1/pml_ob1_component.c
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@@ -198,6 +198,12 @@ static int mca_pml_ob1_component_register(void)
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mca_pml_ob1_param_register_uint("unexpected_limit", 128, &mca_pml_ob1.unexpected_limit);
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+ mca_pml_ob1.use_all_rdma = false;
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+ (void) mca_base_component_var_register(&mca_pml_ob1_component.pmlm_version, "use_all_rdma",
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+ "Use all available RDMA btls for the RDMA and RDMA pipeline protocols "
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+ "(default: false)", MCA_BASE_VAR_TYPE_BOOL, NULL, 0, 0,
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+ OPAL_INFO_LVL_5, MCA_BASE_VAR_SCOPE_GROUP, &mca_pml_ob1.use_all_rdma);
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+
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mca_pml_ob1.allocator_name = "bucket";
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(void) mca_base_component_var_register(&mca_pml_ob1_component.pmlm_version, "allocator",
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"Name of allocator component for unexpected messages",
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diff --git a/ompi/mca/pml/ob1/pml_ob1_rdma.c b/ompi/mca/pml/ob1/pml_ob1_rdma.c
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index 888e126..7513b24 100644
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--- a/ompi/mca/pml/ob1/pml_ob1_rdma.c
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+++ b/ompi/mca/pml/ob1/pml_ob1_rdma.c
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@@ -10,7 +10,7 @@
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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- * Copyright (c) 2014-2015 Los Alamos National Security, LLC. All rights
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+ * Copyright (c) 2014-2016 Los Alamos National Security, LLC. All rights
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* reserved.
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* $COPYRIGHT$
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*
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@@ -42,6 +42,7 @@ size_t mca_pml_ob1_rdma_btls(
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mca_pml_ob1_com_btl_t* rdma_btls)
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{
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int num_btls = mca_bml_base_btl_array_get_size(&bml_endpoint->btl_rdma);
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+ int num_eager_btls = mca_bml_base_btl_array_get_size (&bml_endpoint->btl_eager);
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double weight_total = 0;
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int num_btls_used = 0;
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@@ -57,6 +58,22 @@ size_t mca_pml_ob1_rdma_btls(
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(bml_endpoint->btl_rdma_index + n) % num_btls);
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mca_btl_base_registration_handle_t *reg_handle = NULL;
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mca_btl_base_module_t *btl = bml_btl->btl;
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+ /* NTH: go ahead and use an rdma btl if is the only one */
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+ bool ignore = !mca_pml_ob1.use_all_rdma;
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+
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+ /* do not use rdma btls that are not in the eager list. this is necessary to avoid using
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+ * btls that exist on the endpoint only to support RMA. */
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+ for (int i = 0 ; i < num_eager_btls && ignore ; ++i) {
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+ mca_bml_base_btl_t *eager_btl = mca_bml_base_btl_array_get_index (&bml_endpoint->btl_eager, i);
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+ if (eager_btl->btl_endpoint == bml_btl->btl_endpoint) {
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+ ignore = false;
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+ break;
|
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+ }
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+ }
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+
|
||||
+ if (ignore) {
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+ continue;
|
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+ }
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if (btl->btl_register_mem) {
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/* do not use the RDMA protocol with this btl if 1) leave pinned is disabled,
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@@ -95,22 +112,66 @@ size_t mca_pml_ob1_rdma_btls(
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return num_btls_used;
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}
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+size_t mca_pml_ob1_rdma_pipeline_btls_count (mca_bml_base_endpoint_t* bml_endpoint)
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+{
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+ int num_btls = mca_bml_base_btl_array_get_size (&bml_endpoint->btl_rdma);
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+ int num_eager_btls = mca_bml_base_btl_array_get_size (&bml_endpoint->btl_eager);
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+ int rdma_count = 0;
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||||
+
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+ for(int i = 0; i < num_btls && i < mca_pml_ob1.max_rdma_per_request; ++i) {
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+ mca_bml_base_btl_t *bml_btl = mca_bml_base_btl_array_get_next(&bml_endpoint->btl_rdma);
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||||
+ /* NTH: go ahead and use an rdma btl if is the only one */
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+ bool ignore = !mca_pml_ob1.use_all_rdma;
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||||
+
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+ for (int i = 0 ; i < num_eager_btls && ignore ; ++i) {
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+ mca_bml_base_btl_t *eager_btl = mca_bml_base_btl_array_get_index (&bml_endpoint->btl_eager, i);
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+ if (eager_btl->btl_endpoint == bml_btl->btl_endpoint) {
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+ ignore = false;
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+ break;
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+ }
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+ }
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+
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+ if (!ignore) {
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+ ++rdma_count;
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+ }
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+ }
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+
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+ return rdma_count;
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+}
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+
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size_t mca_pml_ob1_rdma_pipeline_btls( mca_bml_base_endpoint_t* bml_endpoint,
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||||
size_t size,
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mca_pml_ob1_com_btl_t* rdma_btls )
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{
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- int i, num_btls = mca_bml_base_btl_array_get_size(&bml_endpoint->btl_rdma);
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+ int num_btls = mca_bml_base_btl_array_get_size (&bml_endpoint->btl_rdma);
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+ int num_eager_btls = mca_bml_base_btl_array_get_size (&bml_endpoint->btl_eager);
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double weight_total = 0;
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+ int rdma_count = 0;
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||||
+
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||||
+ for(int i = 0; i < num_btls && i < mca_pml_ob1.max_rdma_per_request; i++) {
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||||
+ mca_bml_base_btl_t *bml_btl = mca_bml_base_btl_array_get_next(&bml_endpoint->btl_rdma);
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+ /* NTH: go ahead and use an rdma btl if is the only one */
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+ bool ignore = !mca_pml_ob1.use_all_rdma;
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+
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+ for (int i = 0 ; i < num_eager_btls && ignore ; ++i) {
|
||||
+ mca_bml_base_btl_t *eager_btl = mca_bml_base_btl_array_get_index (&bml_endpoint->btl_eager, i);
|
||||
+ if (eager_btl->btl_endpoint == bml_btl->btl_endpoint) {
|
||||
+ ignore = false;
|
||||
+ break;
|
||||
+ }
|
||||
+ }
|
||||
+
|
||||
+ if (ignore) {
|
||||
+ continue;
|
||||
+ }
|
||||
|
||||
- for(i = 0; i < num_btls && i < mca_pml_ob1.max_rdma_per_request; i++) {
|
||||
- rdma_btls[i].bml_btl =
|
||||
- mca_bml_base_btl_array_get_next(&bml_endpoint->btl_rdma);
|
||||
- rdma_btls[i].btl_reg = NULL;
|
||||
+ rdma_btls[rdma_count].bml_btl = bml_btl;
|
||||
+ rdma_btls[rdma_count++].btl_reg = NULL;
|
||||
|
||||
- weight_total += rdma_btls[i].bml_btl->btl_weight;
|
||||
+ weight_total += bml_btl->btl_weight;
|
||||
}
|
||||
|
||||
- mca_pml_ob1_calc_weighted_length(rdma_btls, i, size, weight_total);
|
||||
+ mca_pml_ob1_calc_weighted_length (rdma_btls, rdma_count, size, weight_total);
|
||||
|
||||
- return i;
|
||||
+ return rdma_count;
|
||||
}
|
||||
diff --git a/ompi/mca/pml/ob1/pml_ob1_rdma.h b/ompi/mca/pml/ob1/pml_ob1_rdma.h
|
||||
index 80e4fb2..7729043 100644
|
||||
--- a/ompi/mca/pml/ob1/pml_ob1_rdma.h
|
||||
+++ b/ompi/mca/pml/ob1/pml_ob1_rdma.h
|
||||
@@ -1,3 +1,4 @@
|
||||
+/* -*- Mode: C; c-basic-offset:4 ; indent-tabs-mode:nil -*- */
|
||||
/*
|
||||
* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
|
||||
* University Research and Technology
|
||||
@@ -9,6 +10,8 @@
|
||||
* University of Stuttgart. All rights reserved.
|
||||
* Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
* All rights reserved.
|
||||
+ * Copyright (c) 2016 Los Alamos National Security, LLC. All rights
|
||||
+ * reserved.
|
||||
* $COPYRIGHT$
|
||||
*
|
||||
* Additional copyrights may follow
|
||||
@@ -37,5 +40,8 @@ size_t mca_pml_ob1_rdma_btls(struct mca_bml_base_endpoint_t* endpoint,
|
||||
* bandwidth */
|
||||
size_t mca_pml_ob1_rdma_pipeline_btls(struct mca_bml_base_endpoint_t* endpoint,
|
||||
size_t size, mca_pml_ob1_com_btl_t* rdma_btls);
|
||||
+
|
||||
+size_t mca_pml_ob1_rdma_pipeline_btls_count (mca_bml_base_endpoint_t* bml_endpoint);
|
||||
+
|
||||
#endif
|
||||
|
||||
diff --git a/ompi/mca/pml/ob1/pml_ob1_recvreq.c b/ompi/mca/pml/ob1/pml_ob1_recvreq.c
|
||||
index ef6d8a8..cfdb783 100644
|
||||
--- a/ompi/mca/pml/ob1/pml_ob1_recvreq.c
|
||||
+++ b/ompi/mca/pml/ob1/pml_ob1_recvreq.c
|
||||
@@ -263,7 +263,7 @@ static int mca_pml_ob1_recv_request_ack(
|
||||
/* by default copy everything */
|
||||
recvreq->req_send_offset = bytes_received;
|
||||
if(hdr->hdr_msg_length > bytes_received) {
|
||||
- size_t rdma_num = mca_bml_base_btl_array_get_size(&bml_endpoint->btl_rdma);
|
||||
+ size_t rdma_num = mca_pml_ob1_rdma_pipeline_btls_count (bml_endpoint);
|
||||
/*
|
||||
* lookup request buffer to determine if memory is already
|
||||
* registered.
|
||||
|
|
@ -1,39 +0,0 @@
|
|||
#!/bin/sh
|
||||
# sit class file
|
||||
#
|
||||
# Christoph Niethammer <niethammer@hlrs.de> (C) 2011-2014
|
||||
#
|
||||
|
||||
CATEGORY="mpi"
|
||||
PACKAGE="openmpi"
|
||||
VERSION="trunk"
|
||||
URL="http://www.open-mpi.org"
|
||||
INSTALLER="Christoph Niethammer <niethammer@hlrs.de>"
|
||||
|
||||
# Archive A and package name P
|
||||
SRCDIR=${SRC_POOL}/openmpi-trunk
|
||||
|
||||
|
||||
# Other interesting configure options:
|
||||
# --enable-mpi-threads
|
||||
# --enable-progress-threads
|
||||
# --with-fca=DIR
|
||||
# --enable-contrib-no-build=vt
|
||||
CONFIGURE_OPTS="
|
||||
--with-devel-headers \
|
||||
--enable-shared \
|
||||
--enable-static \
|
||||
--enable-mpi-java \
|
||||
"
|
||||
|
||||
src_unpack() {
|
||||
/bin/true
|
||||
}
|
||||
|
||||
src_prepare() {
|
||||
./autogen.pl
|
||||
}
|
||||
|
||||
src_pretest() {
|
||||
make check
|
||||
}
|
||||
Loading…
Reference in a new issue