sit/check_modules.sh

#!/bin/bash -l
#
# Copyright (c) 2012-2015 Christoph Niethammer <niethammer@hlrs.de>
#
# Script checking the module environment for problems during module loading/unloading
#
# Usage:
# check_modules.sh [MODULE]
#
# Options:
#   MODULE   May be any valid module path as used for 'module avail [MODULE]'
#

# Command line options:
moduleclass=$1  # check only subset of modules

# definitions for esear color output to display
Color_Off='\e[0m'       # Text Reset
IGreen='\e[0;92m'       # Intense Green
IRed='\e[0;91m'         # Intense Red

# intermediate files, logfiles
LOGDIR=${LOGDIR:=$PWD}
tmpdir=/tmp/check_modules-$USER
mkdir -p $tmpdir
logfile="$LOGDIR/check_modules.log"  # logfile with detailed information
module_load_logfile="$tmpdir/.module_load.log"  # output of 'module load commands
module_rm_logfile="$tmpdir/.module_rm.log"  # output of 'module rm' commands
module_clean_env_file="$tmpdir/.module_clean_env"  # original environment

# safe the original environment
set > $module_clean_env_file

# list of all failed modules
failed_modules=()



echo "--------------------" | tee $logfile
echo "Module environment check" | tee -a $logfile
echo "--------------------" | tee -a $logfile
echo "Date: $(date)" | tee -a $logfile
echo "Host: $(/bin/hostname)" | tee -a $logfile
echo "USER: $USER" | tee -a $logfile
echo "Logfile: $logfile" | tee -a $logfile
echo "--------------------" | tee -a $logfile
echo "Environment:" >> $logfile
cat $module_clean_env_file >> $logfile
echo "--------------------" >> $logfile

for m_original in $(module av -t $moduleclass 2>&1); do
    if [[ $m_original =~ ^[A-Za-z] ]]; then # skip any non module line in output
        m=$(echo $m_original | sed -e 's/(.*)//') # Remove aliases e.g. (default)
        echo -n "Checking $m_original ... "
        echo "Checking $m_original ... " >> $logfile

        cmd="module load $m"
        echo $cmd >> $logfile
        $cmd > $module_load_logfile 2>&1
        cat $module_load_logfile >> $logfile
        module li >>$logfile 2>&1

        # check if module was loaded and did not report errors during loading
        if  module li -t 2>&1 | grep $m >/dev/null &&  ! grep ERROR $module_load_logfile >/dev/null  ; then

            cmd="module rm $m"
            echo $cmd >> $logfile
            $cmd > $module_rm_logfile 2>&1
            cat $module_rm_logfile >> $logfile
            module li >>$logfile 2>&1

            # check if module was unloaded
            if module li -t 2>&1 | grep $m > /dev/null; then
                echo -e "${IRed}unloading failed${Color_Off}"
                echo "ERROR: unloading module '$m' failed" >> $logfile
                failed_modules=(${failed_modules[@]} $m_original)
            else
                echo -e "${IGreen}success${Color_Off}"
                echo "SUCCESS" >> $logfile
            fi

        else
            echo -e "${IRed}loading failed${Color_Off}"
            echo "ERROR: loading module '$m' failed" >> $logfile
            failed_modules=(${failed_modules[@]} $m)
        fi

        # clean up module environment
        cmd="module purge"
        echo $cmd >> $logfile
        $cmd >>$logfile 2>&1
        module li >>$logfile 2>&1
        echo "Resetting environment ..." >>$logfile

        # Reset the complete environment manually to overcome problems with
        # inconsistent internal caches of the module command after module purge.
        source $module_clean_env_file 2>/dev/null

        # clean up intermediate files
        rm -f $module_load_logfile
        rm -f $module_rm_logfile

        echo >>$logfile 2>&1
    fi
done

# clean up file storing the initial environment
rm -f $module_clean_env_file
rm -rf $tmpdir


echo "----------------------------------------"
echo "Summary of failed modules (${#failed_modules[@]}):"
echo "----------------------------------------"
for m in ${failed_modules[@]}; do
    echo "$m"
done
echo "----------------------------------------"