Improved version of the check_modules.sh script fixing all current problems.
* Checks proper module loading * Checks proper module unloading * Fixed problem with module purge * Nice color output * Detailed logfile
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1 changed files with 91 additions and 21 deletions
112
check_modules.sh
112
check_modules.sh
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@ -2,45 +2,115 @@
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#
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# Christoph Niethammer <niethammer@hlrs.de>, (c) 2012
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#
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# TODO:
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# - check for proper module unloading
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# Script checking the module environment for problems during module loading/unloading
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#
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# Usage:
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# check_modules.sh [MODULE]
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#
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# Options:
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# MODULE May be any valid module path as used for 'module avail [MODULE]'
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#
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# Command line options:
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moduleclass=$1 # check only subset of modules
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# definitions for esear color output to display
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Color_Off='\e[0m' # Text Reset
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IGreen='\e[0;92m' # Intense Green
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IRed='\e[0;91m' # Intense Red
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# intermediate files, logfiles
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TMP=${TMP:=/tmp}
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logfile="check_modules.log" # logfile with detailed information
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module_load_logfile="$TMP/.module_load.log" # output of 'module load commands
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module_rm_logfile="$TMP/.module_rm.log" # output of 'module rm' commands
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module_clean_env_file="$TMP/.module_clean_env" # original environment
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# safe the original environment
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set > $module_clean_env_file
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# list of all failed modules
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failed_modules=()
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TMP=${TMP:=/tmp}
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logfile="check_modules.log"
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module_load_logfile="$TMP/.module_load.log"
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module_rm_logfile="$TMP/.module_rm.log"
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moduleclass=$1
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echo "Module environment check, $(date)" | tee $logfile
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echo "--------------------" | tee $logfile
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echo "Module environment check" | tee -a $logfile
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echo "--------------------" | tee -a $logfile
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echo "Date: $(date)" | tee -a $logfile
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echo "Host: $(/bin/hostname)" | tee -a $logfile
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echo "USER: $USER" | tee -a $logfile
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echo "Logfile: $logfile" | tee -a $logfile
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echo "--------------------" | tee -a $logfile
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echo "Environment:" >> $logfile
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cat $module_clean_env_file >> $logfile
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echo "--------------------" >> $logfile
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for m_original in $(module av -t $moduleclass 2>&1); do
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if [[ $m_original =~ ^[A-Za-z] ]]; then # skip any non module line in output
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m=$(echo $m_original | sed -e 's/(.*)//') # Remove aliases e.g. (default)
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echo -n "Checking $m_original ... "
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echo "Checking $m_original ... " >> $logfile
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cmd="module load $m"
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echo $cmd >> $logfile
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$cmd > $module_load_logfile 2>&1
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cat $module_load_logfile >> $logfile
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module li >>$logfile 2>&1
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# check if module was loaded and did not report errors during loading
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if module li -t 2>&1 | grep $m >/dev/null && ! grep ERROR $module_load_logfile >/dev/null ; then
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cmd="module rm $m"
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echo $cmd >> $logfile
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$cmd > $module_rm_logfile 2>&1
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cat $module_rm_logfile >> $logfile
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module li >>$logfile 2>&1
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# check if module was unloaded
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if module li -t 2>&1 | grep $m > /dev/null; then
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echo -e "${IRed}unloading failed${Color_Off}"
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echo "ERROR: unloading module '$m' failed" >> $logfile
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failed_modules=(${failed_modules[@]} $m_original)
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else
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echo -e "${IGreen}success${Color_Off}"
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echo "SUCCESS" >> $logfile
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fi
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for m in $(module av -t $moduleclass 2>&1); do
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if [[ $m =~ ^[A-Za-z] ]]; then
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m=$(echo $m | sed -e 's/(.*)//')
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echo -n "Checking $m ... " | tee -a $logfile
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module load $m > $module_load_logfile 2>&1
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# check if module was loaded
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if module li 2>&1 | grep $m > /dev/null; then
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echo "success" | tee -a $logfile
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else
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echo "failed" | tee -a $logfile
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echo -e "${IRed}loading failed${Color_Off}"
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echo "ERROR: loading module '$m' failed" >> $logfile
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failed_modules=(${failed_modules[@]} $m)
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cat $module_load_logfile >> $logfile
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fi
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module rm $m > $module_rm_logfile 2>&1
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module purge 2>/dev/null
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# clean up module environment
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cmd="module purge"
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echo $cmd >> $logfile
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$cmd >>$logfile 2>&1
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module li >>$logfile 2>&1
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echo "Resetting environment ..." >>$logfile
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# Reset the complete environment manually to overcome problems with
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# inconsistent internal caches of the module command after module purge.
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source $module_clean_env_file 2>/dev/null
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# clean up intermediate files
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rm -f $module_load_logfile
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rm -f $module_rm_logfile
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echo >>$logfile 2>&1
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fi
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done
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# clean up file storing the initial environment
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rm -f $module_clean_env_file
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echo "----------------------------------------"
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echo "Summary of failed modules:"
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echo "Summary of failed modules (${#failed_modules[@]}):"
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echo "----------------------------------------"
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for m in ${failed_modules[@]}; do
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echo "$m"
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done
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echo "----------------------------------------"
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