50df071ad9
* Remove fake URLs from Spack * Ignore long lines for URLs that start with ftp: * Preliminary changes to version regexes * New redesign of version regexes * Allow letters in version-only * Fix detection of versions that end in Final * Rearrange a few regexes and add examples * Add tests for common download repositories * Add test cases for common tarball naming schemes * Finalize version regexes * spack url test -> spack url summary * Clean up comments * Rearrange suffix checks * Use query strings for name detection * Remove no longer necessary url_for_version functions * Strip off extraneous information after package name * Add one more test * Dot in square brackets does not need to be escaped * Move renaming outside of parse_name_offset * Fix versions for a couple more packages * Fix flake8 and doc tests * Correctly parse Python, Lua, and Bio++ package names * Use effective URLs for mfem * Add checksummed version to mitos * Remove url_for_version from STAR-CCM+ package * Revert changes to version numbers with underscores and dashes * Fix name detection for tbb * Correctly parse Ruby gems * Reverted mfem back to shortened URLs. * Updated instructions for better security * Remove preferred=True from newest version * Add tests for new `spack url list` flags * Add tests for strip_name_suffixes * Add unit tests for version separators * Fix bugs related to parseable name but in parseable version * Remove dead code, update docstring * Ignore 'binary' at end of version string * Remove platform from version * Flip libedit version numbers * Re-support weird NCO alpha/beta versions * Rebase and remove one new fake URL * Add / to beginning of regex to avoid picking up similarly named packages * Ignore weird tar versions * Fix bug in url parse --spider when no versions found * Less strict version matching for spack versions * Don't rename Python packages * Be a little more selective, version must begin with a digit * Re-add fake URLs * Fix up several other packages * Ignore more file endings * Add parsing support for Miniconda * Update tab completion * XFAILS are now PASSES for 2 web tests
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.. _developer_guide:
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===============
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Developer Guide
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===============
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This guide is intended for people who want to work on Spack itself.
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If you just want to develop packages, see the :ref:`packaging-guide`.
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It is assumed that you've read the :ref:`basic-usage` and
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:ref:`packaging-guide` sections, and that you're familiar with the
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concepts discussed there. If you're not, we recommend reading those
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first.
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--------
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Overview
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--------
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Spack is designed with three separate roles in mind:
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#. **Users**, who need to install software *without* knowing all the
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details about how it is built.
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#. **Packagers** who know how a particular software package is
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built and encode this information in package files.
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#. **Developers** who work on Spack, add new features, and try to
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make the jobs of packagers and users easier.
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Users could be end users installing software in their home directory,
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or administrators installing software to a shared directory on a
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shared machine. Packagers could be administrators who want to
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automate software builds, or application developers who want to make
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their software more accessible to users.
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As you might expect, there are many types of users with different
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levels of sophistication, and Spack is designed to accommodate both
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simple and complex use cases for packages. A user who only knows that
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he needs a certain package should be able to type something simple,
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like ``spack install <package name>``, and get the package that he
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wants. If a user wants to ask for a specific version, use particular
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compilers, or build several versions with different configurations,
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then that should be possible with a minimal amount of additional
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specification.
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This gets us to the two key concepts in Spack's software design:
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#. **Specs**: expressions for describing builds of software, and
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#. **Packages**: Python modules that build software according to a
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spec.
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A package is a template for building particular software, and a spec
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as a descriptor for one or more instances of that template. Users
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express the configuration they want using a spec, and a package turns
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the spec into a complete build.
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The obvious difficulty with this design is that users under-specify
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what they want. To build a software package, the package object needs
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a *complete* specification. In Spack, if a spec describes only one
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instance of a package, then we say it is **concrete**. If a spec
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could describes many instances, (i.e. it is under-specified in one way
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or another), then we say it is **abstract**.
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Spack's job is to take an *abstract* spec from the user, find a
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*concrete* spec that satisfies the constraints, and hand the task of
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building the software off to the package object. The rest of this
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document describes all the pieces that come together to make that
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happen.
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-------------------
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Directory Structure
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-------------------
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So that you can familiarize yourself with the project, we'll start
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with a high level view of Spack's directory structure:
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.. code-block:: none
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spack/ <- installation root
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bin/
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spack <- main spack executable
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etc/
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spack/ <- Spack config files.
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Can be overridden by files in ~/.spack.
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var/
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spack/ <- build & stage directories
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repos/ <- contains package repositories
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builtin/ <- pkg repository that comes with Spack
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repo.yaml <- descriptor for the builtin repository
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packages/ <- directories under here contain packages
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cache/ <- saves resources downloaded during installs
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opt/
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spack/ <- packages are installed here
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lib/
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spack/
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docs/ <- source for this documentation
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env/ <- compiler wrappers for build environment
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external/ <- external libs included in Spack distro
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llnl/ <- some general-use libraries
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spack/ <- spack module; contains Python code
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cmd/ <- each file in here is a spack subcommand
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compilers/ <- compiler description files
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test/ <- unit test modules
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util/ <- common code
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Spack is designed so that it could live within a `standard UNIX
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directory hierarchy <http://linux.die.net/man/7/hier>`_, so ``lib``,
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``var``, and ``opt`` all contain a ``spack`` subdirectory in case
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Spack is installed alongside other software. Most of the interesting
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parts of Spack live in ``lib/spack``.
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Spack has *one* directory layout and there is no install process.
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Most Python programs don't look like this (they use distutils, ``setup.py``,
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etc.) but we wanted to make Spack *very* easy to use. The simple layout
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spares users from the need to install Spack into a Python environment.
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Many users don't have write access to a Python installation, and installing
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an entire new instance of Python to bootstrap Spack would be very complicated.
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Users should not have to install install a big, complicated package to
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use the thing that's supposed to spare them from the details of big,
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complicated packages. The end result is that Spack works out of the
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box: clone it and add ``bin`` to your PATH and you're ready to go.
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--------------
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Code Structure
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--------------
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This section gives an overview of the various Python modules in Spack,
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grouped by functionality.
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^^^^^^^^^^^^^^^^^^^^^^^
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Package-related modules
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^^^^^^^^^^^^^^^^^^^^^^^
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:mod:`spack.package`
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Contains the :class:`Package <spack.package.Package>` class, which
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is the superclass for all packages in Spack. Methods on ``Package``
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implement all phases of the :ref:`package lifecycle
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<package-lifecycle>` and manage the build process.
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:mod:`spack.packages`
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Contains all of the packages in Spack and methods for managing them.
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Functions like :func:`packages.get <spack.packages.get>` and
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:func:`class_name_for_package_name
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<packages.class_name_for_package_name>` handle mapping package module
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names to class names and dynamically instantiating packages by name
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from module files.
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:mod:`spack.relations`
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*Relations* are relationships between packages, like
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:func:`depends_on <spack.relations.depends_on>` and :func:`provides
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<spack.relations.provides>`. See :ref:`dependencies` and
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:ref:`virtual-dependencies`.
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:mod:`spack.multimethod`
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Implementation of the :func:`@when <spack.multimethod.when>`
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decorator, which allows :ref:`multimethods <multimethods>` in
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packages.
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^^^^^^^^^^^^^^^^^^^^
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Spec-related modules
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^^^^^^^^^^^^^^^^^^^^
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:mod:`spack.spec`
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Contains :class:`Spec <spack.spec.Spec>` and :class:`SpecParser
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<spack.spec.SpecParser>`. Also implements most of the logic for
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normalization and concretization of specs.
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:mod:`spack.parse`
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Contains some base classes for implementing simple recursive descent
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parsers: :class:`Parser <spack.parse.Parser>` and :class:`Lexer
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<spack.parse.Lexer>`. Used by :class:`SpecParser
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<spack.spec.SpecParser>`.
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:mod:`spack.concretize`
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Contains :class:`DefaultConcretizer
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<spack.concretize.DefaultConcretizer>` implementation, which allows
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site administrators to change Spack's :ref:`concretization-policies`.
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:mod:`spack.version`
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Implements a simple :class:`Version <spack.version.Version>` class
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with simple comparison semantics. Also implements
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:class:`VersionRange <spack.version.VersionRange>` and
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:class:`VersionList <spack.version.VersionList>`. All three are
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comparable with each other and offer union and intersection
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operations. Spack uses these classes to compare versions and to
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manage version constraints on specs. Comparison semantics are
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similar to the ``LooseVersion`` class in ``distutils`` and to the
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way RPM compares version strings.
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:mod:`spack.compilers`
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Submodules contains descriptors for all valid compilers in Spack.
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This is used by the build system to set up the build environment.
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.. warning::
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Not yet implemented. Currently has two compiler descriptions,
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but compilers aren't fully integrated with the build process
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yet.
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:mod:`spack.architecture`
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:func:`architecture.sys_type <spack.architecture.sys_type>` is used
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to determine the host architecture while building.
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.. warning::
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Not yet implemented. Should eventually have architecture
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descriptions for cross-compiling.
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^^^^^^^^^^^^^^^^^
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Build environment
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^^^^^^^^^^^^^^^^^
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:mod:`spack.stage`
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Handles creating temporary directories for builds.
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:mod:`spack.compilation`
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This contains utility functions used by the compiler wrapper script,
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``cc``.
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:mod:`spack.directory_layout`
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Classes that control the way an installation directory is laid out.
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Create more implementations of this to change the hierarchy and
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naming scheme in ``$spack_prefix/opt``
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^^^^^^^^^^^^^^^^^
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Spack Subcommands
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^^^^^^^^^^^^^^^^^
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:mod:`spack.cmd`
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Each module in this package implements a Spack subcommand. See
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:ref:`writing commands <writing-commands>` for details.
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^^^^^^^^^^
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Unit tests
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^^^^^^^^^^
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:mod:`spack.test`
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Implements Spack's test suite. Add a module and put its name in
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the test suite in ``__init__.py`` to add more unit tests.
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:mod:`spack.test.mock_packages`
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This is a fake package hierarchy used to mock up packages for
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Spack's test suite.
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^^^^^^^^^^^^^
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Other Modules
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^^^^^^^^^^^^^
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:mod:`spack.url`
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URL parsing, for deducing names and versions of packages from
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tarball URLs.
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:mod:`spack.error`
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:class:`SpackError <spack.error.SpackError>`, the base class for
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Spack's exception hierarchy.
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:mod:`llnl.util.tty`
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Basic output functions for all of the messages Spack writes to the
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terminal.
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:mod:`llnl.util.tty.color`
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Implements a color formatting syntax used by ``spack.tty``.
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:mod:`llnl.util`
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In this package are a number of utility modules for the rest of
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Spack.
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------------
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Spec objects
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------------
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---------------
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Package objects
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---------------
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Most spack commands look something like this:
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#. Parse an abstract spec (or specs) from the command line,
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#. *Normalize* the spec based on information in package files,
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#. *Concretize* the spec according to some customizable policies,
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#. Instantiate a package based on the spec, and
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#. Call methods (e.g., ``install()``) on the package object.
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The information in Package files is used at all stages in this
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process.
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Conceptually, packages are overloaded. They contain:
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-------------
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Stage objects
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-------------
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.. _writing-commands:
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----------------
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Writing commands
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----------------
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Adding a new command to Spack is easy. Simply add a ``<name>.py`` file to
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``lib/spack/spack/cmd/``, where ``<name>`` is the name of the subcommand.
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At the bare minimum, two functions are required in this file:
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^^^^^^^^^^^^^^^^^^
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``setup_parser()``
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^^^^^^^^^^^^^^^^^^
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Unless your command doesn't accept any arguments, a ``setup_parser()``
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function is required to define what arguments and flags your command takes.
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See the `Argparse documentation <https://docs.python.org/2.7/library/argparse.html>`_
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for more details on how to add arguments.
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Some commands have a set of subcommands, like ``spack compiler find`` or
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``spack module refresh``. You can add subparsers to your parser to handle
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this. Check out ``spack edit --command compiler`` for an example of this.
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A lot of commands take the same arguments and flags. These arguments should
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be defined in ``lib/spack/spack/cmd/common/arguments.py`` so that they don't
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need to be redefined in multiple commands.
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^^^^^^^^^^^^
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``<name>()``
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^^^^^^^^^^^^
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In order to run your command, Spack searches for a function with the same
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name as your command in ``<name>.py``. This is the main method for your
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command, and can call other helper methods to handle common tasks.
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Remember, before adding a new command, think to yourself whether or not this
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new command is actually necessary. Sometimes, the functionality you desire
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can be added to an existing command. Also remember to add unit tests for
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your command. If it isn't used very frequently, changes to the rest of
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Spack can cause your command to break without sufficient unit tests to
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prevent this from happening.
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----------
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Unit tests
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----------
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------------
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Unit testing
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------------
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------------------
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Developer commands
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------------------
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.. _cmd-spack-doc:
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^^^^^^^^^^^^^
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``spack doc``
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^^^^^^^^^^^^^
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.. _cmd-spack-test:
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^^^^^^^^^^^^^^
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``spack test``
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^^^^^^^^^^^^^^
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.. _cmd-spack-python:
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^^^^^^^^^^^^^^^^
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``spack python``
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^^^^^^^^^^^^^^^^
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``spack python`` is a command that lets you import and debug things as if
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you were in a Spack interactive shell. Without any arguments, it is similar
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to a normal interactive Python shell, except you can import spack and any
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other Spack modules:
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.. code-block:: console
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$ spack python
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Spack version 0.10.0
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Python 2.7.13, Linux x86_64
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>>> from spack.version import Version
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>>> a = Version('1.2.3')
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>>> b = Version('1_2_3')
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>>> a == b
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True
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>>> c = Version('1.2.3b')
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>>> c > a
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True
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>>>
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You can also run a single command:
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.. code-block:: console
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$ spack python -c 'import distro; distro.linux_distribution()'
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('Fedora', '25', 'Workstation Edition')
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or a file:
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.. code-block:: console
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$ spack python ~/test_fetching.py
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just like you would with the normal ``python`` command.
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.. _cmd-spack-url:
|
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|
^^^^^^^^^^^^^
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``spack url``
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^^^^^^^^^^^^^
|
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A package containing a single URL can be used to download several different
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versions of the package. If you've ever wondered how this works, all of the
|
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magic is in :mod:`spack.url`. This module contains methods for extracting
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the name and version of a package from its URL. The name is used by
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``spack create`` to guess the name of the package. By determining the version
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from the URL, Spack can replace it with other versions to determine where to
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download them from.
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The regular expressions in ``parse_name_offset`` and ``parse_version_offset``
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are used to extract the name and version, but they aren't perfect. In order
|
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to debug Spack's URL parsing support, the ``spack url`` command can be used.
|
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|
"""""""""""""""""""
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``spack url parse``
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"""""""""""""""""""
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If you need to debug a single URL, you can use the following command:
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.. command-output:: spack url parse http://cache.ruby-lang.org/pub/ruby/2.2/ruby-2.2.0.tar.gz
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You'll notice that the name and version of this URL are correctly detected,
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and you can even see which regular expressions it was matched to. However,
|
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you'll notice that when it substitutes the version number in, it doesn't
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replace the ``2.2`` with ``9.9`` where we would expect ``9.9.9b`` to live.
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This particular package may require a ``list_url`` or ``url_for_version``
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function.
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This command also accepts a ``--spider`` flag. If provided, Spack searches
|
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for other versions of the package and prints the matching URLs.
|
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|
|
""""""""""""""""""
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|
``spack url list``
|
|
""""""""""""""""""
|
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|
|
This command lists every URL in every package in Spack. If given the
|
|
``--color`` and ``--extrapolation`` flags, it also colors the part of
|
|
the string that it detected to be the name and version. The
|
|
``--incorrect-name`` and ``--incorrect-version`` flags can be used to
|
|
print URLs that were not being parsed correctly.
|
|
|
|
"""""""""""""""""""""
|
|
``spack url summary``
|
|
"""""""""""""""""""""
|
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|
|
This command attempts to parse every URL for every package in Spack
|
|
and prints a summary of how many of them are being correctly parsed.
|
|
It also prints a histogram showing which regular expressions are being
|
|
matched and how frequently:
|
|
|
|
.. command-output:: spack url summary
|
|
|
|
This command is essential for anyone adding or changing the regular
|
|
expressions that parse names and versions. By running this command
|
|
before and after the change, you can make sure that your regular
|
|
expression fixes more packages than it breaks.
|
|
|
|
---------
|
|
Profiling
|
|
---------
|
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|
|
Spack has some limited built-in support for profiling, and can report
|
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statistics using standard Python timing tools. To use this feature,
|
|
supply ``--profile`` to Spack on the command line, before any subcommands.
|
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|
|
.. _spack-p:
|
|
|
|
^^^^^^^^^^^^^^^^^^^
|
|
``spack --profile``
|
|
^^^^^^^^^^^^^^^^^^^
|
|
|
|
``spack --profile`` output looks like this:
|
|
|
|
.. command-output:: spack --profile graph dyninst
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|
:ellipsis: 25
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|
|
The bottom of the output shows the top most time consuming functions,
|
|
slowest on top. The profiling support is from Python's built-in tool,
|
|
`cProfile
|
|
<https://docs.python.org/2/library/profile.html#module-cProfile>`_.
|