Overhaul Spack's URL parsing (#2972)
* Remove fake URLs from Spack * Ignore long lines for URLs that start with ftp: * Preliminary changes to version regexes * New redesign of version regexes * Allow letters in version-only * Fix detection of versions that end in Final * Rearrange a few regexes and add examples * Add tests for common download repositories * Add test cases for common tarball naming schemes * Finalize version regexes * spack url test -> spack url summary * Clean up comments * Rearrange suffix checks * Use query strings for name detection * Remove no longer necessary url_for_version functions * Strip off extraneous information after package name * Add one more test * Dot in square brackets does not need to be escaped * Move renaming outside of parse_name_offset * Fix versions for a couple more packages * Fix flake8 and doc tests * Correctly parse Python, Lua, and Bio++ package names * Use effective URLs for mfem * Add checksummed version to mitos * Remove url_for_version from STAR-CCM+ package * Revert changes to version numbers with underscores and dashes * Fix name detection for tbb * Correctly parse Ruby gems * Reverted mfem back to shortened URLs. * Updated instructions for better security * Remove preferred=True from newest version * Add tests for new `spack url list` flags * Add tests for strip_name_suffixes * Add unit tests for version separators * Fix bugs related to parseable name but in parseable version * Remove dead code, update docstring * Ignore 'binary' at end of version string * Remove platform from version * Flip libedit version numbers * Re-support weird NCO alpha/beta versions * Rebase and remove one new fake URL * Add / to beginning of regex to avoid picking up similarly named packages * Ignore weird tar versions * Fix bug in url parse --spider when no versions found * Less strict version matching for spack versions * Don't rename Python packages * Be a little more selective, version must begin with a digit * Re-add fake URLs * Fix up several other packages * Ignore more file endings * Add parsing support for Miniconda * Update tab completion * XFAILS are now PASSES for 2 web tests
This commit is contained in:
Adam J. Stewart
Todd Gamblin
parent
7e9777f294
commit
50df071ad9
80 changed files with 1357 additions and 839 deletions
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@ -447,16 +447,16 @@ the string that it detected to be the name and version. The
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``--incorrect-name`` and ``--incorrect-version`` flags can be used to
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print URLs that were not being parsed correctly.
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""""""""""""""""""
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``spack url test``
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""""""""""""""""""
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"""""""""""""""""""""
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``spack url summary``
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"""""""""""""""""""""
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This command attempts to parse every URL for every package in Spack
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and prints a summary of how many of them are being correctly parsed.
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It also prints a histogram showing which regular expressions are being
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matched and how frequently:
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.. command-output:: spack url test
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.. command-output:: spack url summary
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This command is essential for anyone adding or changing the regular
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expressions that parse names and versions. By running this command
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@ -31,13 +31,13 @@
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import spack
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import spack.cmd
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import spack.cmd.checksum
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import spack.url
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import spack.util.web
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from llnl.util.filesystem import mkdirp
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from spack.repository import Repo
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from spack.spec import Spec
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from spack.util.executable import which
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from spack.util.naming import *
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from spack.url import *
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description = "create a new package file"
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@ -382,6 +382,10 @@ class BuildSystemGuesser:
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can take a peek at the fetched tarball and discern the build system it uses
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"""
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def __init__(self):
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"""Sets the default build system."""
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self.build_system = 'generic'
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def __call__(self, stage, url):
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"""Try to guess the type of build system used by a project based on
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the contents of its archive or the URL it was downloaded from."""
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@ -427,14 +431,11 @@ def __call__(self, stage, url):
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# Determine the build system based on the files contained
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# in the archive.
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build_system = 'generic'
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for pattern, bs in clues:
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if any(re.search(pattern, l) for l in lines):
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build_system = bs
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self.build_system = bs
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break
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self.build_system = build_system
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def get_name(args):
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"""Get the name of the package based on the supplied arguments.
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@ -458,9 +459,9 @@ def get_name(args):
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elif args.url:
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# Try to guess the package name based on the URL
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try:
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name = spack.url.parse_name(args.url)
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name = parse_name(args.url)
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tty.msg("This looks like a URL for {0}".format(name))
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except spack.url.UndetectableNameError:
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except UndetectableNameError:
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tty.die("Couldn't guess a name for this package.",
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" Please report this bug. In the meantime, try running:",
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" `spack create --name <name> <url>`")
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@ -515,11 +516,16 @@ def get_versions(args, name):
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if args.url:
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# Find available versions
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url_dict = spack.util.web.find_versions_of_archive(args.url)
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try:
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url_dict = spack.util.web.find_versions_of_archive(args.url)
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except UndetectableVersionError:
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# Use fake versions
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tty.warn("Couldn't detect version in: {0}".format(args.url))
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return versions, guesser
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if not url_dict:
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# If no versions were found, revert to what the user provided
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version = spack.url.parse_version(args.url)
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version = parse_version(args.url)
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url_dict = {version: args.url}
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versions = spack.cmd.checksum.get_checksums(
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@ -611,6 +617,7 @@ def create(parser, args):
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url = get_url(args)
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versions, guesser = get_versions(args, name)
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build_system = get_build_system(args, guesser)
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name = simplify_name(name)
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# Create the package template object
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PackageClass = templates[build_system]
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@ -70,7 +70,7 @@
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# exemptions applied to all files.
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r'.py$': {
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# Exempt lines with URLs from overlong line errors.
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501: [r'(https?|file)\:']
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501: [r'(https?|ftp|file)\:']
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},
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}
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@ -31,6 +31,7 @@
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from llnl.util import tty
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from spack.url import *
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from spack.util.web import find_versions_of_archive
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from spack.util.naming import simplify_name
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description = "debugging tool for url parsing"
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@ -65,20 +66,27 @@ def setup_parser(subparser):
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excl_args.add_argument(
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'-n', '--incorrect-name', action='store_true',
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help='only list urls for which the name was incorrectly parsed')
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excl_args.add_argument(
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'-N', '--correct-name', action='store_true',
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help='only list urls for which the name was correctly parsed')
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excl_args.add_argument(
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'-v', '--incorrect-version', action='store_true',
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help='only list urls for which the version was incorrectly parsed')
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excl_args.add_argument(
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'-V', '--correct-version', action='store_true',
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help='only list urls for which the version was correctly parsed')
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# Test
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# Summary
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sp.add_parser(
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'test', help='print a summary of how well we are parsing package urls')
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'summary',
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help='print a summary of how well we are parsing package urls')
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def url(parser, args):
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action = {
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'parse': url_parse,
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'list': url_list,
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'test': url_test
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'parse': url_parse,
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'list': url_list,
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'summary': url_summary
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}
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action[args.subcommand](args)
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@ -116,6 +124,10 @@ def url_parse(args):
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tty.msg('Spidering for versions:')
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versions = find_versions_of_archive(url)
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if not versions:
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print(' Found no versions for {0}'.format(name))
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return
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max_len = max(len(str(v)) for v in versions)
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for v in sorted(versions):
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@ -145,7 +157,7 @@ def url_list(args):
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return len(urls)
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def url_test(args):
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def url_summary(args):
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# Collect statistics on how many URLs were correctly parsed
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total_urls = 0
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correct_names = 0
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@ -205,19 +217,19 @@ def url_test(args):
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correct_versions, total_urls, correct_versions / total_urls))
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print()
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tty.msg('Statistics on name regular expresions:')
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tty.msg('Statistics on name regular expressions:')
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print()
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print(' Index Count Regular Expresion')
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print(' Index Count Regular Expression')
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for ni in name_regex_dict:
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print(' {0:>3}: {1:>6} r{2!r}'.format(
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ni, name_count_dict[ni], name_regex_dict[ni]))
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print()
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tty.msg('Statistics on version regular expresions:')
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tty.msg('Statistics on version regular expressions:')
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print()
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print(' Index Count Regular Expresion')
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print(' Index Count Regular Expression')
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for vi in version_regex_dict:
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print(' {0:>3}: {1:>6} r{2!r}'.format(
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vi, version_count_dict[vi], version_regex_dict[vi]))
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@ -257,22 +269,38 @@ def url_list_parsing(args, urls, url, pkg):
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:rtype: set
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"""
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if url:
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if args.incorrect_name:
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# Only add URLs whose name was incorrectly parsed
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if args.correct_name or args.incorrect_name:
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# Attempt to parse the name
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try:
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name = parse_name(url)
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if not name_parsed_correctly(pkg, name):
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if (args.correct_name and
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name_parsed_correctly(pkg, name)):
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# Add correctly parsed URLs
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urls.add(url)
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elif (args.incorrect_name and
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not name_parsed_correctly(pkg, name)):
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# Add incorrectly parsed URLs
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urls.add(url)
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except UndetectableNameError:
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urls.add(url)
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elif args.incorrect_version:
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# Only add URLs whose version was incorrectly parsed
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if args.incorrect_name:
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# Add incorrectly parsed URLs
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urls.add(url)
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elif args.correct_version or args.incorrect_version:
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# Attempt to parse the version
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try:
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version = parse_version(url)
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if not version_parsed_correctly(pkg, version):
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if (args.correct_version and
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version_parsed_correctly(pkg, version)):
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# Add correctly parsed URLs
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urls.add(url)
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elif (args.incorrect_version and
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not version_parsed_correctly(pkg, version)):
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# Add incorrectly parsed URLs
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urls.add(url)
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except UndetectableVersionError:
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urls.add(url)
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if args.incorrect_version:
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# Add incorrectly parsed URLs
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urls.add(url)
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else:
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urls.add(url)
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@ -289,6 +317,8 @@ def name_parsed_correctly(pkg, name):
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"""
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pkg_name = pkg.name
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name = simplify_name(name)
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# After determining a name, `spack create` determines a build system.
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# Some build systems prepend a special string to the front of the name.
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# Since this can't be guessed from the URL, it would be unfair to say
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@ -311,9 +341,33 @@ def version_parsed_correctly(pkg, version):
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:returns: True if the name was correctly parsed, else False
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:rtype: bool
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"""
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version = remove_separators(version)
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# If the version parsed from the URL is listed in a version()
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# directive, we assume it was correctly parsed
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for pkg_version in pkg.versions:
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if str(pkg_version) == str(version):
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pkg_version = remove_separators(pkg_version)
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if pkg_version == version:
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return True
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return False
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def remove_separators(version):
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"""Removes separator characters ('.', '_', and '-') from a version.
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A version like 1.2.3 may be displayed as 1_2_3 in the URL.
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Make sure 1.2.3, 1-2-3, 1_2_3, and 123 are considered equal.
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Unfortunately, this also means that 1.23 and 12.3 are equal.
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:param version: A version
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:type version: str or Version
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:returns: The version with all separator characters removed
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:rtype: str
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"""
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version = str(version)
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version = version.replace('.', '')
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version = version.replace('_', '')
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version = version.replace('-', '')
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return version
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@ -53,6 +53,6 @@ def versions(parser, args):
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tty.debug("Check the list_url and list_depth attribute on the "
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"package to help Spack find versions.")
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else:
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print(" Found no unckecksummed versions for %s" % pkg.name)
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print(" Found no unchecksummed versions for %s" % pkg.name)
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else:
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colify(sorted(remote_versions, reverse=True), indent=2)
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@ -48,11 +48,12 @@ def test_name_parsed_correctly():
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assert name_parsed_correctly(MyPackage('r-devtools', []), 'devtools')
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assert name_parsed_correctly(MyPackage('py-numpy', []), 'numpy')
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assert name_parsed_correctly(MyPackage('octave-splines', []), 'splines')
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assert name_parsed_correctly(MyPackage('imagemagick', []), 'ImageMagick') # noqa
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assert name_parsed_correctly(MyPackage('th-data', []), 'TH.data')
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# Expected False
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assert not name_parsed_correctly(MyPackage('', []), 'hdf5')
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assert not name_parsed_correctly(MyPackage('hdf5', []), '')
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assert not name_parsed_correctly(MyPackage('imagemagick', []), 'ImageMagick') # noqa
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assert not name_parsed_correctly(MyPackage('yaml-cpp', []), 'yamlcpp')
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assert not name_parsed_correctly(MyPackage('yamlcpp', []), 'yaml-cpp')
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assert not name_parsed_correctly(MyPackage('r-py-parser', []), 'parser')
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@ -64,6 +65,8 @@ def test_version_parsed_correctly():
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assert version_parsed_correctly(MyPackage('', ['1.2.3']), '1.2.3')
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assert version_parsed_correctly(MyPackage('', ['5.4a', '5.4b']), '5.4a')
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assert version_parsed_correctly(MyPackage('', ['5.4a', '5.4b']), '5.4b')
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assert version_parsed_correctly(MyPackage('', ['1.63.0']), '1_63_0')
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assert version_parsed_correctly(MyPackage('', ['0.94h']), '094h')
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# Expected False
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assert not version_parsed_correctly(MyPackage('', []), '1.2.3')
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@ -95,7 +98,7 @@ def test_url_list(parser):
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colored_urls = url_list(args)
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assert colored_urls == total_urls
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# The following two options should print fewer URLs than the default.
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# The following options should print fewer URLs than the default.
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# If they print the same number of URLs, something is horribly broken.
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# If they say we missed 0 URLs, something is probably broken too.
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args = parser.parse_args(['list', '--incorrect-name'])
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@ -106,11 +109,19 @@ def test_url_list(parser):
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incorrect_version_urls = url_list(args)
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assert 0 < incorrect_version_urls < total_urls
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args = parser.parse_args(['list', '--correct-name'])
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correct_name_urls = url_list(args)
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assert 0 < correct_name_urls < total_urls
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def test_url_test(parser):
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args = parser.parse_args(['test'])
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args = parser.parse_args(['list', '--correct-version'])
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correct_version_urls = url_list(args)
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assert 0 < correct_version_urls < total_urls
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def test_url_summary(parser):
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args = parser.parse_args(['summary'])
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(total_urls, correct_names, correct_versions,
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name_count_dict, version_count_dict) = url_test(args)
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name_count_dict, version_count_dict) = url_summary(args)
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assert 0 < correct_names <= sum(name_count_dict.values()) <= total_urls # noqa
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assert 0 < correct_versions <= sum(version_count_dict.values()) <= total_urls # noqa
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@ -1,101 +0,0 @@
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##############################################################################
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# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/llnl/spack
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# Please also see the LICENSE file for our notice and the LGPL.
|
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
|
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
|
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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"""Tests ability of spack to extrapolate URL versions from
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existing versions.
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"""
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import unittest
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import spack.url as url
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||||
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||||
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class UrlExtrapolateTest(unittest.TestCase):
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def check_url(self, base, version, new_url):
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self.assertEqual(url.substitute_version(base, version), new_url)
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def test_libelf_version(self):
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base = "http://www.mr511.de/software/libelf-0.8.13.tar.gz"
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self.check_url(base, '0.8.13', base)
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self.check_url(
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base, '0.8.12', "http://www.mr511.de/software/libelf-0.8.12.tar.gz")
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self.check_url(
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base, '0.3.1', "http://www.mr511.de/software/libelf-0.3.1.tar.gz")
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self.check_url(
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base, '1.3.1b', "http://www.mr511.de/software/libelf-1.3.1b.tar.gz")
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def test_libdwarf_version(self):
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base = "http://www.prevanders.net/libdwarf-20130729.tar.gz"
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self.check_url(base, '20130729', base)
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self.check_url(
|
||||
base, '8.12', "http://www.prevanders.net/libdwarf-8.12.tar.gz")
|
||||
|
||||
def test_dyninst_version(self):
|
||||
# Dyninst has a version twice in the URL.
|
||||
base = "http://www.dyninst.org/sites/default/files/downloads/dyninst/8.1.2/DyninstAPI-8.1.2.tgz"
|
||||
self.check_url(base, '8.1.2', base)
|
||||
self.check_url(base, '8.2',
|
||||
"http://www.dyninst.org/sites/default/files/downloads/dyninst/8.2/DyninstAPI-8.2.tgz")
|
||||
self.check_url(base, '8.3.1',
|
||||
"http://www.dyninst.org/sites/default/files/downloads/dyninst/8.3.1/DyninstAPI-8.3.1.tgz")
|
||||
|
||||
def test_partial_version_prefix(self):
|
||||
# Test now with a partial prefix earlier in the URL -- this is
|
||||
# hard to figure out so Spack only substitutes the last
|
||||
# instance of the version.
|
||||
base = "http://www.dyninst.org/sites/default/files/downloads/dyninst/8.1/DyninstAPI-8.1.2.tgz"
|
||||
self.check_url(base, '8.1.2', base)
|
||||
self.check_url(base, '8.1.4',
|
||||
"http://www.dyninst.org/sites/default/files/downloads/dyninst/8.1/DyninstAPI-8.1.4.tgz")
|
||||
self.check_url(base, '8.2',
|
||||
"http://www.dyninst.org/sites/default/files/downloads/dyninst/8.1/DyninstAPI-8.2.tgz")
|
||||
self.check_url(base, '8.3.1',
|
||||
"http://www.dyninst.org/sites/default/files/downloads/dyninst/8.1/DyninstAPI-8.3.1.tgz")
|
||||
|
||||
def test_scalasca_partial_version(self):
|
||||
# Note that this probably doesn't actually work, but sites are
|
||||
# inconsistent about their directory structure, so it's not
|
||||
# clear what is right. This test is for consistency and to
|
||||
# document behavior. If you figure out a good way to handle
|
||||
# this case, fix the tests too.
|
||||
self.check_url('http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-4.3-TP1.tar.gz', '8.3.1',
|
||||
'http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-8.3.1.tar.gz')
|
||||
self.check_url('http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-4.3-TP1.tar.gz', '8.3.1',
|
||||
'http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-8.3.1.tar.gz')
|
||||
|
||||
def test_mpileaks_version(self):
|
||||
self.check_url('https://github.com/hpc/mpileaks/releases/download/v1.0/mpileaks-1.0.tar.gz', '2.1.3',
|
||||
'https://github.com/hpc/mpileaks/releases/download/v2.1.3/mpileaks-2.1.3.tar.gz')
|
||||
|
||||
def test_gcc(self):
|
||||
self.check_url('http://open-source-box.org/gcc/gcc-4.9.2/gcc-4.9.2.tar.bz2', '4.7',
|
||||
'http://open-source-box.org/gcc/gcc-4.7/gcc-4.7.tar.bz2')
|
||||
self.check_url('http://open-source-box.org/gcc/gcc-4.4.7/gcc-4.4.7.tar.bz2', '4.4.7',
|
||||
'http://open-source-box.org/gcc/gcc-4.4.7/gcc-4.4.7.tar.bz2')
|
||||
|
||||
def test_github_raw(self):
|
||||
self.check_url('https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7.tgz?raw=true', '2.0.7',
|
||||
'https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7.tgz?raw=true')
|
||||
self.check_url('https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7.tgz?raw=true', '4.7',
|
||||
'https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v4.7.tgz?raw=true')
|
||||
|
|
@ -22,92 +22,633 @@
|
|||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
"""\
|
||||
This file has a bunch of versions tests taken from the excellent version
|
||||
detection in Homebrew.
|
||||
"""
|
||||
"""Tests Spack's ability to parse the name and version of a package
|
||||
based on its URL."""
|
||||
|
||||
import os
|
||||
import unittest
|
||||
|
||||
import spack.url as url
|
||||
from spack.url import *
|
||||
|
||||
|
||||
class UrlParseTest(unittest.TestCase):
|
||||
class UrlStripVersionSuffixesTest(unittest.TestCase):
|
||||
"""Tests for spack.url.strip_version_suffixes"""
|
||||
|
||||
def check(self, before, after):
|
||||
stripped = strip_version_suffixes(before)
|
||||
self.assertEqual(stripped, after)
|
||||
|
||||
def test_no_suffix(self):
|
||||
self.check('rgb-1.0.6',
|
||||
'rgb-1.0.6')
|
||||
|
||||
def test_misleading_prefix(self):
|
||||
self.check('jpegsrc.v9b',
|
||||
'jpegsrc.v9b')
|
||||
self.check('turbolinux702',
|
||||
'turbolinux702')
|
||||
self.check('converge_install_2.3.16',
|
||||
'converge_install_2.3.16')
|
||||
|
||||
# Download type
|
||||
|
||||
def test_src(self):
|
||||
self.check('apache-ant-1.9.7-src',
|
||||
'apache-ant-1.9.7')
|
||||
self.check('go1.7.4.src',
|
||||
'go1.7.4')
|
||||
|
||||
def test_source(self):
|
||||
self.check('bowtie2-2.2.5-source',
|
||||
'bowtie2-2.2.5')
|
||||
self.check('grib_api-1.17.0-Source',
|
||||
'grib_api-1.17.0')
|
||||
|
||||
def test_full(self):
|
||||
self.check('julia-0.4.3-full',
|
||||
'julia-0.4.3')
|
||||
|
||||
def test_bin(self):
|
||||
self.check('apache-maven-3.3.9-bin',
|
||||
'apache-maven-3.3.9')
|
||||
|
||||
def test_binary(self):
|
||||
self.check('Jmol-14.8.0-binary',
|
||||
'Jmol-14.8.0')
|
||||
|
||||
def test_gem(self):
|
||||
self.check('rubysl-date-2.0.9.gem',
|
||||
'rubysl-date-2.0.9')
|
||||
|
||||
def test_tar(self):
|
||||
self.check('gromacs-4.6.1-tar',
|
||||
'gromacs-4.6.1')
|
||||
|
||||
def test_sh(self):
|
||||
self.check('Miniconda2-4.3.11-Linux-x86_64.sh',
|
||||
'Miniconda2-4.3.11')
|
||||
|
||||
# Download version
|
||||
|
||||
def test_stable(self):
|
||||
self.check('libevent-2.0.21-stable',
|
||||
'libevent-2.0.21')
|
||||
|
||||
def test_final(self):
|
||||
self.check('2.6.7-final',
|
||||
'2.6.7')
|
||||
|
||||
def test_rel(self):
|
||||
self.check('v1.9.5.1rel',
|
||||
'v1.9.5.1')
|
||||
|
||||
def test_orig(self):
|
||||
self.check('dash_0.5.5.1.orig',
|
||||
'dash_0.5.5.1')
|
||||
|
||||
def test_plus(self):
|
||||
self.check('ncbi-blast-2.6.0+-src',
|
||||
'ncbi-blast-2.6.0')
|
||||
|
||||
# License
|
||||
|
||||
def test_gpl(self):
|
||||
self.check('cppad-20170114.gpl',
|
||||
'cppad-20170114')
|
||||
|
||||
# OS
|
||||
|
||||
def test_linux(self):
|
||||
self.check('astyle_2.04_linux',
|
||||
'astyle_2.04')
|
||||
|
||||
def test_unix(self):
|
||||
self.check('install-tl-unx',
|
||||
'install-tl')
|
||||
|
||||
def test_macos(self):
|
||||
self.check('astyle_1.23_macosx',
|
||||
'astyle_1.23')
|
||||
self.check('haxe-2.08-osx',
|
||||
'haxe-2.08')
|
||||
|
||||
# PyPI
|
||||
|
||||
def test_wheel(self):
|
||||
self.check('entrypoints-0.2.2-py2.py3-none-any.whl',
|
||||
'entrypoints-0.2.2')
|
||||
self.check('numpy-1.12.0-cp27-cp27m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl', # noqa
|
||||
'numpy-1.12.0')
|
||||
|
||||
def test_exe(self):
|
||||
self.check('PyYAML-3.12.win-amd64-py3.5.exe',
|
||||
'PyYAML-3.12')
|
||||
|
||||
# Combinations of multiple patterns
|
||||
|
||||
def test_complex_all(self):
|
||||
self.check('p7zip_9.04_src_all',
|
||||
'p7zip_9.04')
|
||||
|
||||
def test_complex_run(self):
|
||||
self.check('cuda_8.0.44_linux.run',
|
||||
'cuda_8.0.44')
|
||||
|
||||
def test_complex_file(self):
|
||||
self.check('ack-2.14-single-file',
|
||||
'ack-2.14')
|
||||
|
||||
def test_complex_jar(self):
|
||||
self.check('antlr-3.4-complete.jar',
|
||||
'antlr-3.4')
|
||||
|
||||
def test_complex_oss(self):
|
||||
self.check('tbb44_20160128oss_src_0',
|
||||
'tbb44_20160128')
|
||||
|
||||
def test_complex_darwin(self):
|
||||
self.check('ghc-7.0.4-x86_64-apple-darwin',
|
||||
'ghc-7.0.4')
|
||||
self.check('ghc-7.0.4-i386-apple-darwin',
|
||||
'ghc-7.0.4')
|
||||
|
||||
def test_complex_arch(self):
|
||||
self.check('VizGlow_v2.2alpha17-R21November2016-Linux-x86_64-Install',
|
||||
'VizGlow_v2.2alpha17-R21November2016')
|
||||
self.check('jdk-8u92-linux-x64',
|
||||
'jdk-8u92')
|
||||
self.check('cuda_6.5.14_linux_64.run',
|
||||
'cuda_6.5.14')
|
||||
|
||||
def test_complex_with(self):
|
||||
self.check('mafft-7.221-with-extensions-src',
|
||||
'mafft-7.221')
|
||||
self.check('spark-2.0.0-bin-without-hadoop',
|
||||
'spark-2.0.0')
|
||||
|
||||
def test_complex_public(self):
|
||||
self.check('dakota-6.3-public.src',
|
||||
'dakota-6.3')
|
||||
|
||||
def test_complex_universal(self):
|
||||
self.check('synergy-1.3.6p2-MacOSX-Universal',
|
||||
'synergy-1.3.6p2')
|
||||
|
||||
|
||||
class UrlStripNameSuffixesTest(unittest.TestCase):
|
||||
"""Tests for spack.url.strip_name_suffixes"""
|
||||
|
||||
def check(self, before, version, after):
|
||||
stripped = strip_name_suffixes(before, version)
|
||||
self.assertEqual(stripped, after)
|
||||
|
||||
def test_no_suffix(self):
|
||||
self.check('rgb-1.0.6', '1.0.6',
|
||||
'rgb')
|
||||
self.check('nauty26r7', '26r7',
|
||||
'nauty')
|
||||
|
||||
# Download type
|
||||
|
||||
def test_install(self):
|
||||
self.check('converge_install_2.3.16', '2.3.16',
|
||||
'converge')
|
||||
|
||||
def test_src(self):
|
||||
self.check('jpegsrc.v9b', '9b',
|
||||
'jpeg')
|
||||
|
||||
def test_std(self):
|
||||
self.check('ghostscript-fonts-std-8.11', '8.11',
|
||||
'ghostscript-fonts')
|
||||
|
||||
# Download version
|
||||
|
||||
def test_snapshot(self):
|
||||
self.check('gts-snapshot-121130', '121130',
|
||||
'gts')
|
||||
|
||||
def test_distrib(self):
|
||||
self.check('zoltan_distrib_v3.83', '3.83',
|
||||
'zoltan')
|
||||
|
||||
# VCS
|
||||
|
||||
def test_bazaar(self):
|
||||
self.check('libvterm-0+bzr681', '681',
|
||||
'libvterm')
|
||||
|
||||
# License
|
||||
|
||||
def test_gpl(self):
|
||||
self.check('PyQt-x11-gpl-4.11.3', '4.11.3',
|
||||
'PyQt-x11')
|
||||
|
||||
|
||||
class UrlParseOffsetTest(unittest.TestCase):
|
||||
|
||||
def check(self, name, noffset, ver, voffset, path):
|
||||
# Make sure parse_name_offset and parse_name_version are working
|
||||
v, vstart, vlen, vi, vre = parse_version_offset(path)
|
||||
n, nstart, nlen, ni, nre = parse_name_offset(path, v)
|
||||
|
||||
self.assertEqual(n, name)
|
||||
self.assertEqual(v, ver)
|
||||
self.assertEqual(nstart, noffset)
|
||||
self.assertEqual(vstart, voffset)
|
||||
|
||||
def test_name_in_path(self):
|
||||
self.check(
|
||||
'antlr', 25, '2.7.7', 40,
|
||||
'https://github.com/antlr/antlr/tarball/v2.7.7')
|
||||
|
||||
def test_name_in_stem(self):
|
||||
self.check(
|
||||
'gmp', 32, '6.0.0a', 36,
|
||||
'https://gmplib.org/download/gmp/gmp-6.0.0a.tar.bz2')
|
||||
|
||||
def test_name_in_suffix(self):
|
||||
# Don't think I've ever seen one of these before
|
||||
# We don't look for it, so it would probably fail anyway
|
||||
pass
|
||||
|
||||
def test_version_in_path(self):
|
||||
self.check(
|
||||
'nextflow', 31, '0.20.1', 59,
|
||||
'https://github.com/nextflow-io/nextflow/releases/download/v0.20.1/nextflow')
|
||||
|
||||
def test_version_in_stem(self):
|
||||
self.check(
|
||||
'zlib', 24, '1.2.10', 29,
|
||||
'http://zlib.net/fossils/zlib-1.2.10.tar.gz')
|
||||
self.check(
|
||||
'slepc', 51, '3.6.2', 57,
|
||||
'http://slepc.upv.es/download/download.php?filename=slepc-3.6.2.tar.gz')
|
||||
self.check(
|
||||
'cloog', 61, '0.18.1', 67,
|
||||
'http://www.bastoul.net/cloog/pages/download/count.php3?url=./cloog-0.18.1.tar.gz')
|
||||
self.check(
|
||||
'libxc', 58, '2.2.2', 64,
|
||||
'http://www.tddft.org/programs/octopus/down.php?file=libxc/libxc-2.2.2.tar.gz')
|
||||
|
||||
def test_version_in_suffix(self):
|
||||
self.check(
|
||||
'swiftsim', 36, '0.3.0', 76,
|
||||
'http://gitlab.cosma.dur.ac.uk/swift/swiftsim/repository/archive.tar.gz?ref=v0.3.0')
|
||||
self.check(
|
||||
'sionlib', 30, '1.7.1', 59,
|
||||
'http://apps.fz-juelich.de/jsc/sionlib/download.php?version=1.7.1')
|
||||
|
||||
def test_regex_in_name(self):
|
||||
self.check(
|
||||
'voro++', 40, '0.4.6', 47,
|
||||
'http://math.lbl.gov/voro++/download/dir/voro++-0.4.6.tar.gz')
|
||||
|
||||
|
||||
class UrlParseNameAndVersionTest(unittest.TestCase):
|
||||
|
||||
def assert_not_detected(self, string):
|
||||
self.assertRaises(
|
||||
url.UndetectableVersionError, url.parse_name_and_version, string)
|
||||
UndetectableVersionError, parse_name_and_version, string)
|
||||
|
||||
def check(self, name, v, string, **kwargs):
|
||||
# Make sure correct name and version are extracted.
|
||||
parsed_name, parsed_v = url.parse_name_and_version(string)
|
||||
parsed_name, parsed_v = parse_name_and_version(string)
|
||||
self.assertEqual(parsed_name, name)
|
||||
self.assertEqual(parsed_v, url.Version(v))
|
||||
|
||||
# Some URLs (like boost) are special and need to override the
|
||||
# built-in functionality.
|
||||
if kwargs.get('no_check_url', False):
|
||||
return
|
||||
self.assertEqual(parsed_v, Version(v))
|
||||
|
||||
# Make sure Spack formulates the right URL when we try to
|
||||
# build one with a specific version.
|
||||
self.assertEqual(string, url.substitute_version(string, v))
|
||||
self.assertEqual(string, substitute_version(string, v))
|
||||
|
||||
def test_wwwoffle_version(self):
|
||||
self.check(
|
||||
'wwwoffle', '2.9h',
|
||||
'http://www.gedanken.demon.co.uk/download-wwwoffle/wwwoffle-2.9h.tgz')
|
||||
# Common Repositories
|
||||
|
||||
def test_version_sourceforge_download(self):
|
||||
def test_github_downloads(self):
|
||||
# name/archive/ver.ver
|
||||
self.check(
|
||||
'foo-bar', '1.21',
|
||||
'http://sourceforge.net/foo_bar-1.21.tar.gz/download')
|
||||
'nco', '4.6.2',
|
||||
'https://github.com/nco/nco/archive/4.6.2.tar.gz')
|
||||
# name/archive/vver.ver
|
||||
self.check(
|
||||
'foo-bar', '1.21',
|
||||
'http://sf.net/foo_bar-1.21.tar.gz/download')
|
||||
'vim', '8.0.0134',
|
||||
'https://github.com/vim/vim/archive/v8.0.0134.tar.gz')
|
||||
# name/archive/name-ver.ver
|
||||
self.check(
|
||||
'oce', '0.18',
|
||||
'https://github.com/tpaviot/oce/archive/OCE-0.18.tar.gz')
|
||||
# name/releases/download/vver/name-ver.ver
|
||||
self.check(
|
||||
'libmesh', '1.0.0',
|
||||
'https://github.com/libMesh/libmesh/releases/download/v1.0.0/libmesh-1.0.0.tar.bz2')
|
||||
# name/tarball/vver.ver
|
||||
self.check(
|
||||
'git', '2.7.1',
|
||||
'https://github.com/git/git/tarball/v2.7.1')
|
||||
# name/zipball/vver.ver
|
||||
self.check(
|
||||
'git', '2.7.1',
|
||||
'https://github.com/git/git/zipball/v2.7.1')
|
||||
|
||||
def test_gitlab_downloads(self):
|
||||
# name/repository/archive.ext?ref=vver.ver
|
||||
self.check(
|
||||
'swiftsim', '0.3.0',
|
||||
'http://gitlab.cosma.dur.ac.uk/swift/swiftsim/repository/archive.tar.gz?ref=v0.3.0')
|
||||
# name/repository/archive.ext?ref=name-ver.ver
|
||||
self.check(
|
||||
'icet', '1.2.3',
|
||||
'https://gitlab.kitware.com/icet/icet/repository/archive.tar.gz?ref=IceT-1.2.3')
|
||||
|
||||
def test_bitbucket_downloads(self):
|
||||
# name/get/ver.ver
|
||||
self.check(
|
||||
'eigen', '3.2.7',
|
||||
'https://bitbucket.org/eigen/eigen/get/3.2.7.tar.bz2')
|
||||
# name/get/vver.ver
|
||||
self.check(
|
||||
'hoomd-blue', '1.3.3',
|
||||
'https://bitbucket.org/glotzer/hoomd-blue/get/v1.3.3.tar.bz2')
|
||||
# name/downloads/name-ver.ver
|
||||
self.check(
|
||||
'dolfin', '2016.1.0',
|
||||
'https://bitbucket.org/fenics-project/dolfin/downloads/dolfin-2016.1.0.tar.gz')
|
||||
|
||||
def test_sourceforge_downloads(self):
|
||||
# name-ver.ver
|
||||
self.check(
|
||||
'libpng', '1.6.27',
|
||||
'http://download.sourceforge.net/libpng/libpng-1.6.27.tar.gz')
|
||||
self.check(
|
||||
'lcms2', '2.6',
|
||||
'http://downloads.sourceforge.net/project/lcms/lcms/2.6/lcms2-2.6.tar.gz')
|
||||
self.check(
|
||||
'modules', '3.2.10',
|
||||
'http://prdownloads.sourceforge.net/modules/modules-3.2.10.tar.gz')
|
||||
# name-ver.ver.ext/download
|
||||
self.check(
|
||||
'glew', '2.0.0',
|
||||
'https://sourceforge.net/projects/glew/files/glew/2.0.0/glew-2.0.0.tgz/download')
|
||||
|
||||
def test_cran_downloads(self):
|
||||
# name.name_ver.ver-ver.ver
|
||||
self.check(
|
||||
'TH.data', '1.0-8',
|
||||
'https://cran.r-project.org/src/contrib/TH.data_1.0-8.tar.gz')
|
||||
self.check(
|
||||
'knitr', '1.14',
|
||||
'https://cran.rstudio.com/src/contrib/knitr_1.14.tar.gz')
|
||||
self.check(
|
||||
'devtools', '1.12.0',
|
||||
'https://cloud.r-project.org/src/contrib/devtools_1.12.0.tar.gz')
|
||||
|
||||
def test_pypi_downloads(self):
|
||||
# name.name_name-ver.ver
|
||||
self.check(
|
||||
'3to2', '1.1.1',
|
||||
'https://pypi.python.org/packages/source/3/3to2/3to2-1.1.1.zip')
|
||||
self.check(
|
||||
'mpmath', '0.19',
|
||||
'https://pypi.python.org/packages/source/m/mpmath/mpmath-all-0.19.tar.gz')
|
||||
self.check(
|
||||
'pandas', '0.16.0',
|
||||
'https://pypi.python.org/packages/source/p/pandas/pandas-0.16.0.tar.gz#md5=bfe311f05dc0c351f8955fbd1e296e73')
|
||||
self.check(
|
||||
'sphinx_rtd_theme', '0.1.10a0',
|
||||
'https://pypi.python.org/packages/da/6b/1b75f13d8aa3333f19c6cdf1f0bc9f52ea739cae464fbee050307c121857/sphinx_rtd_theme-0.1.10a0.tar.gz')
|
||||
self.check(
|
||||
'backports.ssl_match_hostname', '3.5.0.1',
|
||||
'https://pypi.io/packages/source/b/backports.ssl_match_hostname/backports.ssl_match_hostname-3.5.0.1.tar.gz')
|
||||
|
||||
def test_bazaar_downloads(self):
|
||||
self.check(
|
||||
'libvterm', '681',
|
||||
'http://www.leonerd.org.uk/code/libvterm/libvterm-0+bzr681.tar.gz')
|
||||
|
||||
# Common Tarball Formats
|
||||
|
||||
def test_version_only(self):
|
||||
# ver.ver
|
||||
self.check(
|
||||
'eigen', '3.2.7',
|
||||
'https://bitbucket.org/eigen/eigen/get/3.2.7.tar.bz2')
|
||||
# ver.ver-ver
|
||||
self.check(
|
||||
'ImageMagick', '7.0.2-7',
|
||||
'https://github.com/ImageMagick/ImageMagick/archive/7.0.2-7.tar.gz')
|
||||
# vver.ver
|
||||
self.check(
|
||||
'CGNS', '3.3.0',
|
||||
'https://github.com/CGNS/CGNS/archive/v3.3.0.tar.gz')
|
||||
# vver_ver
|
||||
self.check(
|
||||
'luafilesystem', '1_6_3',
|
||||
'https://github.com/keplerproject/luafilesystem/archive/v1_6_3.tar.gz')
|
||||
|
||||
def test_no_separators(self):
|
||||
# namever
|
||||
self.check(
|
||||
'turbolinux', '702',
|
||||
'file://{0}/turbolinux702.tar.gz'.format(os.getcwd()))
|
||||
self.check(
|
||||
'nauty', '26r7',
|
||||
'http://pallini.di.uniroma1.it/nauty26r7.tar.gz')
|
||||
|
||||
def test_dashes_only(self):
|
||||
# name-name-ver-ver
|
||||
self.check(
|
||||
'Trilinos', '12-10-1',
|
||||
'https://github.com/trilinos/Trilinos/archive/trilinos-release-12-10-1.tar.gz')
|
||||
self.check(
|
||||
'panda', '2016-03-07',
|
||||
'http://comopt.ifi.uni-heidelberg.de/software/PANDA/downloads/panda-2016-03-07.tar')
|
||||
self.check(
|
||||
'gts', '121130',
|
||||
'http://gts.sourceforge.net/tarballs/gts-snapshot-121130.tar.gz')
|
||||
self.check(
|
||||
'cdd', '061a',
|
||||
'http://www.cs.mcgill.ca/~fukuda/download/cdd/cdd-061a.tar.gz')
|
||||
|
||||
def test_underscores_only(self):
|
||||
# name_name_ver_ver
|
||||
self.check(
|
||||
'tinyxml', '2_6_2',
|
||||
'https://sourceforge.net/projects/tinyxml/files/tinyxml/2.6.2/tinyxml_2_6_2.tar.gz')
|
||||
self.check(
|
||||
'boost', '1_55_0',
|
||||
'http://downloads.sourceforge.net/project/boost/boost/1.55.0/boost_1_55_0.tar.bz2')
|
||||
self.check(
|
||||
'yorick', '2_2_04',
|
||||
'https://github.com/dhmunro/yorick/archive/y_2_2_04.tar.gz')
|
||||
# name_namever_ver
|
||||
self.check(
|
||||
'tbb', '44_20160413',
|
||||
'https://www.threadingbuildingblocks.org/sites/default/files/software_releases/source/tbb44_20160413oss_src.tgz')
|
||||
|
||||
def test_dots_only(self):
|
||||
# name.name.ver.ver
|
||||
self.check(
|
||||
'prank', '150803',
|
||||
'http://wasabiapp.org/download/prank/prank.source.150803.tgz')
|
||||
self.check(
|
||||
'jpeg', '9b',
|
||||
'http://www.ijg.org/files/jpegsrc.v9b.tar.gz')
|
||||
self.check(
|
||||
'openjpeg', '2.1',
|
||||
'https://github.com/uclouvain/openjpeg/archive/version.2.1.tar.gz')
|
||||
# name.namever.ver
|
||||
self.check(
|
||||
'atlas', '3.11.34',
|
||||
'http://sourceforge.net/projects/math-atlas/files/Developer%20%28unstable%29/3.11.34/atlas3.11.34.tar.bz2')
|
||||
self.check(
|
||||
'visit', '2.10.1',
|
||||
'http://portal.nersc.gov/project/visit/releases/2.10.1/visit2.10.1.tar.gz')
|
||||
self.check(
|
||||
'geant', '4.10.01.p03',
|
||||
'http://geant4.cern.ch/support/source/geant4.10.01.p03.tar.gz')
|
||||
self.check(
|
||||
'tcl', '8.6.5',
|
||||
'http://prdownloads.sourceforge.net/tcl/tcl8.6.5-src.tar.gz')
|
||||
|
||||
def test_dash_dot(self):
|
||||
# name-name-ver.ver
|
||||
# digit in name
|
||||
self.check(
|
||||
'm4', '1.4.17',
|
||||
'https://ftp.gnu.org/gnu/m4/m4-1.4.17.tar.gz')
|
||||
# letter in version
|
||||
self.check(
|
||||
'gmp', '6.0.0a',
|
||||
'https://gmplib.org/download/gmp/gmp-6.0.0a.tar.bz2')
|
||||
# version starts with 'v'
|
||||
self.check(
|
||||
'LaunchMON', '1.0.2',
|
||||
'https://github.com/LLNL/LaunchMON/releases/download/v1.0.2/launchmon-v1.0.2.tar.gz')
|
||||
# name-ver-ver.ver
|
||||
self.check(
|
||||
'libedit', '20150325-3.1',
|
||||
'http://thrysoee.dk/editline/libedit-20150325-3.1.tar.gz')
|
||||
|
||||
def test_dash_underscore(self):
|
||||
# name-name-ver_ver
|
||||
self.check(
|
||||
'icu4c', '57_1',
|
||||
'http://download.icu-project.org/files/icu4c/57.1/icu4c-57_1-src.tgz')
|
||||
|
||||
def test_underscore_dot(self):
|
||||
# name_name_ver.ver
|
||||
self.check(
|
||||
'superlu_dist', '4.1',
|
||||
'http://crd-legacy.lbl.gov/~xiaoye/SuperLU/superlu_dist_4.1.tar.gz')
|
||||
self.check(
|
||||
'pexsi', '0.9.0',
|
||||
'https://math.berkeley.edu/~linlin/pexsi/download/pexsi_v0.9.0.tar.gz')
|
||||
# name_name.ver.ver
|
||||
self.check(
|
||||
'fer', '696',
|
||||
'ftp://ftp.pmel.noaa.gov/ferret/pub/source/fer_source.v696.tar.gz')
|
||||
|
||||
def test_dash_dot_dash_dot(self):
|
||||
# name-name-ver.ver-ver.ver
|
||||
self.check(
|
||||
'sowing', '1.1.23-p1',
|
||||
'http://ftp.mcs.anl.gov/pub/petsc/externalpackages/sowing-1.1.23-p1.tar.gz')
|
||||
self.check(
|
||||
'bib2xhtml', '3.0-15-gf506',
|
||||
'http://www.spinellis.gr/sw/textproc/bib2xhtml/bib2xhtml-v3.0-15-gf506.tar.gz')
|
||||
# namever.ver-ver.ver
|
||||
self.check(
|
||||
'go', '1.4-bootstrap-20161024',
|
||||
'https://storage.googleapis.com/golang/go1.4-bootstrap-20161024.tar.gz')
|
||||
|
||||
def test_underscore_dash_dot(self):
|
||||
# name_name-ver.ver
|
||||
self.check(
|
||||
'the_silver_searcher', '0.32.0',
|
||||
'http://geoff.greer.fm/ag/releases/the_silver_searcher-0.32.0.tar.gz')
|
||||
self.check(
|
||||
'sphinx_rtd_theme', '0.1.10a0',
|
||||
'https://pypi.python.org/packages/source/s/sphinx_rtd_theme/sphinx_rtd_theme-0.1.10a0.tar.gz')
|
||||
|
||||
def test_dot_underscore_dot_dash_dot(self):
|
||||
# name.name_ver.ver-ver.ver
|
||||
self.check(
|
||||
'TH.data', '1.0-8',
|
||||
'https://cran.r-project.org/src/contrib/TH.data_1.0-8.tar.gz')
|
||||
self.check(
|
||||
'XML', '3.98-1.4',
|
||||
'https://cran.r-project.org/src/contrib/XML_3.98-1.4.tar.gz')
|
||||
|
||||
def test_dash_dot_underscore_dot(self):
|
||||
# name-name-ver.ver_ver.ver
|
||||
self.check(
|
||||
'pypar', '2.1.5_108',
|
||||
'https://storage.googleapis.com/google-code-archive-downloads/v2/code.google.com/pypar/pypar-2.1.5_108.tgz')
|
||||
# name-namever.ver_ver.ver
|
||||
self.check(
|
||||
'STAR-CCM+', '11.06.010_02',
|
||||
'file://{0}/STAR-CCM+11.06.010_02_linux-x86_64.tar.gz'.format(os.getcwd()))
|
||||
|
||||
# Weird URLS
|
||||
|
||||
def test_version_in_path(self):
|
||||
# github.com/repo/name/releases/download/name-vver/name
|
||||
self.check(
|
||||
'nextflow', '0.20.1',
|
||||
'https://github.com/nextflow-io/nextflow/releases/download/v0.20.1/nextflow')
|
||||
|
||||
def test_suffix_queries(self):
|
||||
self.check(
|
||||
'swiftsim', '0.3.0',
|
||||
'http://gitlab.cosma.dur.ac.uk/swift/swiftsim/repository/archive.tar.gz?ref=v0.3.0')
|
||||
self.check(
|
||||
'sionlib', '1.7.1',
|
||||
'http://apps.fz-juelich.de/jsc/sionlib/download.php?version=1.7.1')
|
||||
|
||||
def test_stem_queries(self):
|
||||
self.check(
|
||||
'slepc', '3.6.2',
|
||||
'http://slepc.upv.es/download/download.php?filename=slepc-3.6.2.tar.gz')
|
||||
self.check(
|
||||
'otf', '1.12.5salmon',
|
||||
'http://wwwpub.zih.tu-dresden.de/%7Emlieber/dcount/dcount.php?package=otf&get=OTF-1.12.5salmon.tar.gz')
|
||||
|
||||
def test_single_character_name(self):
|
||||
self.check(
|
||||
'R', '3.3.2',
|
||||
'https://cloud.r-project.org/src/base/R-3/R-3.3.2.tar.gz')
|
||||
|
||||
def test_single_digit_version(self):
|
||||
pass
|
||||
|
||||
def test_name_starts_with_digit(self):
|
||||
self.check(
|
||||
'3to2', '1.1.1',
|
||||
'https://pypi.python.org/packages/source/3/3to2/3to2-1.1.1.zip')
|
||||
|
||||
def plus_in_name(self):
|
||||
self.check(
|
||||
'gtk+', '2.24.31',
|
||||
'http://ftp.gnome.org/pub/gnome/sources/gtk+/2.24/gtk+-2.24.31.tar.xz')
|
||||
self.check(
|
||||
'voro++', '0.4.6',
|
||||
'http://math.lbl.gov/voro++/download/dir/voro++-0.4.6.tar.gz')
|
||||
|
||||
def test_no_version(self):
|
||||
self.assert_not_detected('http://example.com/blah.tar')
|
||||
self.assert_not_detected('foo')
|
||||
self.assert_not_detected('http://www.netlib.org/blas/blast-forum/cblas.tgz')
|
||||
self.assert_not_detected('http://www.netlib.org/voronoi/triangle.zip')
|
||||
|
||||
def test_version_all_dots(self):
|
||||
def test_download_php(self):
|
||||
# Name comes before download.php
|
||||
self.check(
|
||||
'foo-bar-la', '1.14', 'http://example.com/foo.bar.la.1.14.zip')
|
||||
|
||||
def test_version_underscore_separator(self):
|
||||
'sionlib', '1.7.1',
|
||||
'http://apps.fz-juelich.de/jsc/sionlib/download.php?version=1.7.1')
|
||||
# Ignore download.php
|
||||
self.check(
|
||||
'grc', '1.1',
|
||||
'http://example.com/grc_1.1.tar.gz')
|
||||
|
||||
def test_boost_version_style(self):
|
||||
'slepc', '3.6.2',
|
||||
'http://slepc.upv.es/download/download.php?filename=slepc-3.6.2.tar.gz')
|
||||
self.check(
|
||||
'boost', '1.39.0',
|
||||
'http://example.com/boost_1_39_0.tar.bz2',
|
||||
no_check_url=True)
|
||||
|
||||
def test_erlang_version_style(self):
|
||||
self.check(
|
||||
'otp', 'R13B',
|
||||
'http://erlang.org/download/otp_src_R13B.tar.gz')
|
||||
|
||||
def test_another_erlang_version_style(self):
|
||||
self.check(
|
||||
'otp', 'R15B01',
|
||||
'https://github.com/erlang/otp/tarball/OTP_R15B01')
|
||||
|
||||
def test_yet_another_erlang_version_style(self):
|
||||
self.check(
|
||||
'otp', 'R15B03-1',
|
||||
'https://github.com/erlang/otp/tarball/OTP_R15B03-1')
|
||||
|
||||
def test_p7zip_version_style(self):
|
||||
self.check(
|
||||
'p7zip', '9.04',
|
||||
'http://kent.dl.sourceforge.net/sourceforge/p7zip/p7zip_9.04_src_all.tar.bz2')
|
||||
|
||||
def test_new_github_style(self):
|
||||
self.check(
|
||||
'libnet', '1.1.4',
|
||||
'https://github.com/sam-github/libnet/tarball/libnet-1.1.4')
|
||||
'ScientificPython', '2.8.1',
|
||||
'https://sourcesup.renater.fr/frs/download.php/file/4411/ScientificPython-2.8.1.tar.gz')
|
||||
|
||||
def test_gloox_beta_style(self):
|
||||
self.check(
|
||||
|
|
@ -119,85 +660,11 @@ def test_sphinx_beta_style(self):
|
|||
'sphinx', '1.10-beta',
|
||||
'http://sphinxsearch.com/downloads/sphinx-1.10-beta.tar.gz')
|
||||
|
||||
def test_astyle_verson_style(self):
|
||||
self.check(
|
||||
'astyle', '1.23',
|
||||
'http://kent.dl.sourceforge.net/sourceforge/astyle/astyle_1.23_macosx.tar.gz')
|
||||
|
||||
def test_version_dos2unix(self):
|
||||
self.check(
|
||||
'dos2unix', '3.1',
|
||||
'http://www.sfr-fresh.com/linux/misc/dos2unix-3.1.tar.gz')
|
||||
|
||||
def test_version_internal_dash(self):
|
||||
self.check(
|
||||
'foo-arse', '1.1-2',
|
||||
'http://example.com/foo-arse-1.1-2.tar.gz')
|
||||
|
||||
def test_version_single_digit(self):
|
||||
self.check(
|
||||
'foo-bar', '45',
|
||||
'http://example.com/foo_bar.45.tar.gz')
|
||||
|
||||
def test_noseparator_single_digit(self):
|
||||
self.check(
|
||||
'foo-bar', '45',
|
||||
'http://example.com/foo_bar45.tar.gz')
|
||||
|
||||
def test_version_developer_that_hates_us_format(self):
|
||||
self.check(
|
||||
'foo-bar-la', '1.2.3',
|
||||
'http://example.com/foo-bar-la.1.2.3.tar.gz')
|
||||
|
||||
def test_version_regular(self):
|
||||
self.check(
|
||||
'foo-bar', '1.21',
|
||||
'http://example.com/foo_bar-1.21.tar.gz')
|
||||
|
||||
def test_version_gitlab(self):
|
||||
self.check(
|
||||
'vtk', '7.0.0',
|
||||
'https://gitlab.kitware.com/vtk/vtk/repository/'
|
||||
'archive.tar.bz2?ref=v7.0.0')
|
||||
self.check(
|
||||
'icet', '1.2.3',
|
||||
'https://gitlab.kitware.com/icet/icet/repository/'
|
||||
'archive.tar.gz?ref=IceT-1.2.3')
|
||||
self.check(
|
||||
'foo', '42.1337',
|
||||
'http://example.com/org/foo/repository/'
|
||||
'archive.zip?ref=42.1337bar')
|
||||
|
||||
def test_version_github(self):
|
||||
self.check(
|
||||
'yajl', '1.0.5',
|
||||
'http://github.com/lloyd/yajl/tarball/1.0.5')
|
||||
|
||||
def test_version_github_with_high_patch_number(self):
|
||||
self.check(
|
||||
'yajl', '1.2.34',
|
||||
'http://github.com/lloyd/yajl/tarball/v1.2.34')
|
||||
|
||||
def test_yet_another_version(self):
|
||||
self.check(
|
||||
'mad', '0.15.1b',
|
||||
'http://example.com/mad-0.15.1b.tar.gz')
|
||||
|
||||
def test_lame_version_style(self):
|
||||
self.check(
|
||||
'lame', '398-2',
|
||||
'http://kent.dl.sourceforge.net/sourceforge/lame/lame-398-2.tar.gz')
|
||||
|
||||
def test_ruby_version_style(self):
|
||||
self.check(
|
||||
'ruby', '1.9.1-p243',
|
||||
'ftp://ftp.ruby-lang.org/pub/ruby/1.9/ruby-1.9.1-p243.tar.gz')
|
||||
|
||||
def test_omega_version_style(self):
|
||||
self.check(
|
||||
'omega', '0.80.2',
|
||||
'http://www.alcyone.com/binaries/omega/omega-0.80.2-src.tar.gz')
|
||||
|
||||
def test_rc_style(self):
|
||||
self.check(
|
||||
'libvorbis', '1.2.2rc1',
|
||||
|
|
@ -208,60 +675,14 @@ def test_dash_rc_style(self):
|
|||
'js', '1.8.0-rc1',
|
||||
'http://ftp.mozilla.org/pub/mozilla.org/js/js-1.8.0-rc1.tar.gz')
|
||||
|
||||
def test_angband_version_style(self):
|
||||
self.check(
|
||||
'angband', '3.0.9b',
|
||||
'http://rephial.org/downloads/3.0/angband-3.0.9b-src.tar.gz')
|
||||
|
||||
def test_stable_suffix(self):
|
||||
self.check(
|
||||
'libevent', '1.4.14b',
|
||||
'http://www.monkey.org/~provos/libevent-1.4.14b-stable.tar.gz')
|
||||
|
||||
def test_debian_style_1(self):
|
||||
self.check(
|
||||
'sl', '3.03',
|
||||
'http://ftp.de.debian.org/debian/pool/main/s/sl/sl_3.03.orig.tar.gz')
|
||||
|
||||
def test_debian_style_2(self):
|
||||
self.check(
|
||||
'mmv', '1.01b',
|
||||
'http://ftp.de.debian.org/debian/pool/main/m/mmv/mmv_1.01b.orig.tar.gz')
|
||||
|
||||
def test_imagemagick_style(self):
|
||||
self.check(
|
||||
'imagemagick', '6.7.5-7',
|
||||
|
||||
'http://downloads.sf.net/project/machomebrew/mirror/ImageMagick-6.7.5-7.tar.bz2')
|
||||
|
||||
def test_dash_version_dash_style(self):
|
||||
self.check(
|
||||
'antlr', '3.4',
|
||||
'http://www.antlr.org/download/antlr-3.4-complete.jar')
|
||||
|
||||
def test_apache_version_style(self):
|
||||
self.check(
|
||||
'apache-cassandra', '1.2.0-rc2',
|
||||
'http://www.apache.org/dyn/closer.cgi?path=/cassandra/1.2.0/apache-cassandra-1.2.0-rc2-bin.tar.gz')
|
||||
|
||||
def test_jpeg_style(self):
|
||||
self.check(
|
||||
'jpegsrc', '8d',
|
||||
'http://www.ijg.org/files/jpegsrc.v8d.tar.gz')
|
||||
|
||||
def test_pypy_version(self):
|
||||
self.check(
|
||||
'pypy', '1.4.1',
|
||||
'http://pypy.org/download/pypy-1.4.1-osx.tar.bz2')
|
||||
|
||||
def test_openssl_version(self):
|
||||
self.check(
|
||||
'openssl', '0.9.8s',
|
||||
'http://www.openssl.org/source/openssl-0.9.8s.tar.gz')
|
||||
|
||||
def test_xaw3d_version(self):
|
||||
self.check(
|
||||
'xaw3d', '1.5E',
|
||||
'Xaw3d', '1.5E',
|
||||
'ftp://ftp.visi.com/users/hawkeyd/X/Xaw3d-1.5E.tar.gz')
|
||||
|
||||
def test_fann_version(self):
|
||||
|
|
@ -269,16 +690,6 @@ def test_fann_version(self):
|
|||
'fann', '2.1.0beta',
|
||||
'http://downloads.sourceforge.net/project/fann/fann/2.1.0beta/fann-2.1.0beta.zip')
|
||||
|
||||
def test_iges_version(self):
|
||||
self.check(
|
||||
'grads', '2.0.1',
|
||||
'ftp://iges.org/grads/2.0/grads-2.0.1-bin-darwin9.8-intel.tar.gz')
|
||||
|
||||
def test_haxe_version(self):
|
||||
self.check(
|
||||
'haxe', '2.08',
|
||||
'http://haxe.org/file/haxe-2.08-osx.tar.gz')
|
||||
|
||||
def test_imap_version(self):
|
||||
self.check(
|
||||
'imap', '2007f',
|
||||
|
|
@ -289,26 +700,6 @@ def test_suite3270_version(self):
|
|||
'suite3270', '3.3.12ga7',
|
||||
'http://sourceforge.net/projects/x3270/files/x3270/3.3.12ga7/suite3270-3.3.12ga7-src.tgz')
|
||||
|
||||
def test_synergy_version(self):
|
||||
self.check(
|
||||
'synergy', '1.3.6p2',
|
||||
'http://synergy.googlecode.com/files/synergy-1.3.6p2-MacOSX-Universal.zip')
|
||||
|
||||
def test_mvapich2_19_version(self):
|
||||
self.check(
|
||||
'mvapich2', '1.9',
|
||||
'http://mvapich.cse.ohio-state.edu/download/mvapich2/mv2/mvapich2-1.9.tgz')
|
||||
|
||||
def test_mvapich2_20_version(self):
|
||||
self.check(
|
||||
'mvapich2', '2.0',
|
||||
'http://mvapich.cse.ohio-state.edu/download/mvapich/mv2/mvapich2-2.0.tar.gz')
|
||||
|
||||
def test_hdf5_version(self):
|
||||
self.check(
|
||||
'hdf5', '1.8.13',
|
||||
'http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.13.tar.bz2')
|
||||
|
||||
def test_scalasca_version(self):
|
||||
self.check(
|
||||
'cube', '4.2.3',
|
||||
|
|
@ -317,55 +708,20 @@ def test_scalasca_version(self):
|
|||
'cube', '4.3-TP1',
|
||||
'http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-4.3-TP1.tar.gz')
|
||||
|
||||
def test_mpileaks_version(self):
|
||||
self.check(
|
||||
'mpileaks', '1.0',
|
||||
'https://github.com/hpc/mpileaks/releases/download/v1.0/mpileaks-1.0.tar.gz')
|
||||
self.check(
|
||||
'mpileaks', '1.0',
|
||||
'https://github.com/hpc/mpileaks/releases/download/1.0/mpileaks-1.0.tar.gz')
|
||||
|
||||
def test_gcc_version(self):
|
||||
self.check(
|
||||
'gcc', '4.4.7',
|
||||
'http://open-source-box.org/gcc/gcc-4.4.7/gcc-4.4.7.tar.bz2')
|
||||
|
||||
def test_gcc_version_precedence(self):
|
||||
# prefer the version in the tarball, not in the url prefix.
|
||||
self.check(
|
||||
'gcc', '4.4.7',
|
||||
'http://open-source-box.org/gcc/gcc-4.9.2/gcc-4.4.7.tar.bz2')
|
||||
|
||||
def test_github_raw_url(self):
|
||||
self.check(
|
||||
'powerparser', '2.0.7',
|
||||
'CLAMR', '2.0.7',
|
||||
'https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7.tgz?raw=true')
|
||||
|
||||
def test_r_xml_version(self):
|
||||
self.check(
|
||||
'xml', '3.98-1.4',
|
||||
'https://cran.r-project.org/src/contrib/XML_3.98-1.4.tar.gz')
|
||||
|
||||
def test_nco_version(self):
|
||||
self.check(
|
||||
'nco', '4.6.2-beta03',
|
||||
'https://github.com/nco/nco/archive/4.6.2-beta03.tar.gz')
|
||||
|
||||
self.check(
|
||||
'nco', '4.6.3-alpha04',
|
||||
'https://github.com/nco/nco/archive/4.6.3-alpha04.tar.gz')
|
||||
|
||||
def test_yorick_version(self):
|
||||
self.check(
|
||||
'yorick', '2_2_04',
|
||||
'https://github.com/dhmunro/yorick/archive/y_2_2_04.tar.gz')
|
||||
|
||||
def test_luaposix_version(self):
|
||||
self.check(
|
||||
'luaposix', '33.4.0',
|
||||
'https://github.com/luaposix/luaposix/archive/release-v33.4.0.tar.gz')
|
||||
|
||||
def test_sionlib_version(self):
|
||||
def test_nco_version(self):
|
||||
self.check(
|
||||
'sionlib', '1.7.1',
|
||||
'http://apps.fz-juelich.de/jsc/sionlib/download.php?version=1.7.1')
|
||||
'nco', '4.6.2-beta03',
|
||||
'https://github.com/nco/nco/archive/4.6.2-beta03.tar.gz')
|
||||
self.check(
|
||||
'nco', '4.6.3-alpha04',
|
||||
'https://github.com/nco/nco/archive/4.6.3-alpha04.tar.gz')
|
||||
|
|
|
|||
|
|
@ -22,44 +22,64 @@
|
|||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
"""\
|
||||
This test does sanity checks on substituting new versions into URLs
|
||||
"""
|
||||
"""Tests Spack's ability to substitute a different version into a URL."""
|
||||
|
||||
import os
|
||||
import unittest
|
||||
import spack.url as url
|
||||
from spack.url import substitute_version
|
||||
|
||||
|
||||
base = "https://comp.llnl.gov/linear_solvers/download/hypre-2.9.0b.tar.gz"
|
||||
stem = "https://comp.llnl.gov/linear_solvers/download/hypre-"
|
||||
class UrlSubstitutionTest(unittest.TestCase):
|
||||
|
||||
def check(self, base, version, new_url):
|
||||
self.assertEqual(substitute_version(base, version), new_url)
|
||||
|
||||
class PackageSanityTest(unittest.TestCase):
|
||||
def test_same_version(self):
|
||||
# Ensures that substituting the same version results in the same URL
|
||||
self.check(
|
||||
'http://www.mr511.de/software/libelf-0.8.13.tar.gz', '0.8.13',
|
||||
'http://www.mr511.de/software/libelf-0.8.13.tar.gz')
|
||||
|
||||
def test_hypre_url_substitution(self):
|
||||
self.assertEqual(url.substitute_version(base, '2.9.0b'), base)
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '2.8.0b'), stem + "2.8.0b.tar.gz")
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '2.7.0b'), stem + "2.7.0b.tar.gz")
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '2.6.0b'), stem + "2.6.0b.tar.gz")
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '1.14.0b'), stem + "1.14.0b.tar.gz")
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '1.13.0b'), stem + "1.13.0b.tar.gz")
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '2.0.0'), stem + "2.0.0.tar.gz")
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '1.6.0'), stem + "1.6.0.tar.gz")
|
||||
def test_different_version(self):
|
||||
# Test a completely different version syntax
|
||||
self.check(
|
||||
'http://www.prevanders.net/libdwarf-20130729.tar.gz', '8.12',
|
||||
'http://www.prevanders.net/libdwarf-8.12.tar.gz')
|
||||
|
||||
def test_otf2_url_substitution(self):
|
||||
base = "http://www.vi-hps.org/upload/packages/otf2/otf2-1.4.tar.gz"
|
||||
def test_double_version(self):
|
||||
# Test a URL where the version appears twice
|
||||
# It should get substituted both times
|
||||
self.check(
|
||||
'https://github.com/hpc/mpileaks/releases/download/v1.0/mpileaks-1.0.tar.gz', '2.1.3',
|
||||
'https://github.com/hpc/mpileaks/releases/download/v2.1.3/mpileaks-2.1.3.tar.gz')
|
||||
|
||||
self.assertEqual(url.substitute_version(base, '1.4'), base)
|
||||
def test_partial_version_prefix(self):
|
||||
# Test now with a partial prefix earlier in the URL
|
||||
# This is hard to figure out so Spack only substitutes
|
||||
# the last instance of the version
|
||||
self.check(
|
||||
'https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.0.tar.bz2', '2.2.0',
|
||||
'https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.2.0.tar.bz2')
|
||||
self.check(
|
||||
'https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.0.tar.bz2', '2.2',
|
||||
'https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.2.tar.bz2')
|
||||
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '1.3.1'),
|
||||
"http://www.vi-hps.org/upload/packages/otf2/otf2-1.3.1.tar.gz")
|
||||
self.assertEqual(
|
||||
url.substitute_version(base, '1.2.1'),
|
||||
"http://www.vi-hps.org/upload/packages/otf2/otf2-1.2.1.tar.gz")
|
||||
def test_no_separator(self):
|
||||
# No separator between the name and version of the package
|
||||
self.check(
|
||||
'file://{0}/turbolinux702.tar.gz'.format(os.getcwd()), '703',
|
||||
'file://{0}/turbolinux703.tar.gz'.format(os.getcwd()))
|
||||
|
||||
def test_github_raw(self):
|
||||
self.check(
|
||||
'https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7.tgz?raw=true', '2.0.7',
|
||||
'https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7.tgz?raw=true')
|
||||
self.check(
|
||||
'https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7.tgz?raw=true', '4.7',
|
||||
'https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v4.7.tgz?raw=true')
|
||||
|
||||
def test_regex(self):
|
||||
# Package name contains regex characters
|
||||
self.check(
|
||||
'http://math.lbl.gov/voro++/download/dir/voro++-0.4.6.tar.gz', '1.2.3',
|
||||
'http://math.lbl.gov/voro++/download/dir/voro++-1.2.3.tar.gz')
|
||||
|
|
|
|||
|
|
@ -23,7 +23,6 @@
|
|||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
"""Tests for web.py."""
|
||||
import pytest
|
||||
import os
|
||||
|
||||
import spack
|
||||
|
|
@ -141,7 +140,6 @@ def test_find_versions_of_archive_2():
|
|||
assert ver('2.0.0') in versions
|
||||
|
||||
|
||||
@pytest.mark.xfail
|
||||
def test_find_exotic_versions_of_archive_2():
|
||||
versions = find_versions_of_archive(root_tarball, root, list_depth=2)
|
||||
# up for grabs to make this better.
|
||||
|
|
@ -157,7 +155,6 @@ def test_find_versions_of_archive_3():
|
|||
assert ver('4.5') in versions
|
||||
|
||||
|
||||
@pytest.mark.xfail
|
||||
def test_find_exotic_versions_of_archive_3():
|
||||
versions = find_versions_of_archive(root_tarball, root, list_depth=3)
|
||||
assert ver('2.0.0b2') in versions
|
||||
|
|
|
|||
|
|
@ -71,7 +71,7 @@ def find_list_url(url):
|
|||
|
||||
url_types = [
|
||||
# e.g. https://github.com/llnl/callpath/archive/v1.0.1.tar.gz
|
||||
(r'^(https://github.com/[^/]+/[^/]+)/archive/',
|
||||
(r'(.*github\.com/[^/]+/[^/]+)/archive/',
|
||||
lambda m: m.group(1) + '/releases')]
|
||||
|
||||
for pattern, fun in url_types:
|
||||
|
|
@ -101,6 +101,177 @@ def strip_query_and_fragment(path):
|
|||
return (path, '') # Ignore URL parse errors here
|
||||
|
||||
|
||||
def strip_version_suffixes(path):
|
||||
"""Some tarballs contain extraneous information after the version:
|
||||
|
||||
* ``bowtie2-2.2.5-source``
|
||||
* ``libevent-2.0.21-stable``
|
||||
* ``cuda_8.0.44_linux.run``
|
||||
|
||||
These strings are not part of the version number and should be ignored.
|
||||
This function strips those suffixes off and returns the remaining string.
|
||||
The goal is that the version is always the last thing in ``path``:
|
||||
|
||||
* ``bowtie2-2.2.5``
|
||||
* ``libevent-2.0.21``
|
||||
* ``cuda_8.0.44``
|
||||
|
||||
:param str path: The filename or URL for the package
|
||||
:return: The ``path`` with any extraneous suffixes removed
|
||||
:rtype: str
|
||||
"""
|
||||
# NOTE: This could be done with complicated regexes in parse_version_offset
|
||||
# NOTE: The problem is that we would have to add these regexes to the end
|
||||
# NOTE: of every single version regex. Easier to just strip them off
|
||||
# NOTE: permanently
|
||||
|
||||
suffix_regexes = [
|
||||
# Download type
|
||||
'[Ii]nstall',
|
||||
'all',
|
||||
'src(_0)?',
|
||||
'[Ss]ources?',
|
||||
'file',
|
||||
'full',
|
||||
'single',
|
||||
'public',
|
||||
'with[a-zA-Z_-]+',
|
||||
'bin',
|
||||
'binary',
|
||||
'run',
|
||||
'[Uu]niversal',
|
||||
'jar',
|
||||
'complete',
|
||||
'oss',
|
||||
'gem',
|
||||
'tar',
|
||||
'sh',
|
||||
|
||||
# Download version
|
||||
'stable',
|
||||
'[Ff]inal',
|
||||
'rel',
|
||||
'orig',
|
||||
'dist',
|
||||
'\+',
|
||||
|
||||
# License
|
||||
'gpl',
|
||||
|
||||
# Arch
|
||||
# Needs to come before and after OS, appears in both orders
|
||||
'ia32',
|
||||
'intel',
|
||||
'amd64',
|
||||
'x64',
|
||||
'x86_64',
|
||||
'x86',
|
||||
'i[36]86',
|
||||
'ppc64(le)?',
|
||||
'armv?(7l|6l|64)',
|
||||
|
||||
# OS
|
||||
'[Ll]inux(_64)?',
|
||||
'[Uu]ni?x',
|
||||
'[Ss]un[Oo][Ss]',
|
||||
'[Mm]ac[Oo][Ss][Xx]?',
|
||||
'[Oo][Ss][Xx]',
|
||||
'[Dd]arwin(64)?',
|
||||
'[Aa]pple',
|
||||
'[Ww]indows',
|
||||
'[Ww]in(64|32)?',
|
||||
'[Cc]ygwin(64|32)?',
|
||||
'[Mm]ingw',
|
||||
|
||||
# Arch
|
||||
# Needs to come before and after OS, appears in both orders
|
||||
'ia32',
|
||||
'intel',
|
||||
'amd64',
|
||||
'x64',
|
||||
'x86_64',
|
||||
'x86',
|
||||
'i[36]86',
|
||||
'ppc64(le)?',
|
||||
'armv?(7l|6l|64)?',
|
||||
|
||||
# PyPI
|
||||
'[._-]py[23].*\.whl',
|
||||
'[._-]cp[23].*\.whl',
|
||||
'[._-]win.*\.exe',
|
||||
]
|
||||
|
||||
for regex in suffix_regexes:
|
||||
# Remove the suffix from the end of the path
|
||||
# This may be done multiple times
|
||||
path = re.sub(r'[._-]?' + regex + '$', '', path)
|
||||
|
||||
return path
|
||||
|
||||
|
||||
def strip_name_suffixes(path, version):
|
||||
"""Most tarballs contain a package name followed by a version number.
|
||||
However, some also contain extraneous information in-between the name
|
||||
and version:
|
||||
|
||||
* ``rgb-1.0.6``
|
||||
* ``converge_install_2.3.16``
|
||||
* ``jpegsrc.v9b``
|
||||
|
||||
These strings are not part of the package name and should be ignored.
|
||||
This function strips the version number and any extraneous suffixes
|
||||
off and returns the remaining string. The goal is that the name is
|
||||
always the last thing in ``path``:
|
||||
|
||||
* ``rgb``
|
||||
* ``converge``
|
||||
* ``jpeg``
|
||||
|
||||
:param str path: The filename or URL for the package
|
||||
:param str version: The version detected for this URL
|
||||
:return: The ``path`` with any extraneous suffixes removed
|
||||
:rtype: str
|
||||
"""
|
||||
# NOTE: This could be done with complicated regexes in parse_name_offset
|
||||
# NOTE: The problem is that we would have to add these regexes to every
|
||||
# NOTE: single name regex. Easier to just strip them off permanently
|
||||
|
||||
suffix_regexes = [
|
||||
# Strip off the version and anything after it
|
||||
|
||||
# name-ver
|
||||
# name_ver
|
||||
# name.ver
|
||||
r'[._-]v?' + str(version) + '.*',
|
||||
|
||||
# namever
|
||||
str(version) + '.*',
|
||||
|
||||
# Download type
|
||||
'install',
|
||||
'src',
|
||||
'(open)?[Ss]ources?',
|
||||
'[._-]std',
|
||||
|
||||
# Download version
|
||||
'snapshot',
|
||||
'distrib',
|
||||
|
||||
# VCS
|
||||
'0\+bzr',
|
||||
|
||||
# License
|
||||
'gpl',
|
||||
]
|
||||
|
||||
for regex in suffix_regexes:
|
||||
# Remove the suffix from the end of the path
|
||||
# This may be done multiple times
|
||||
path = re.sub('[._-]?' + regex + '$', '', path)
|
||||
|
||||
return path
|
||||
|
||||
|
||||
def split_url_extension(path):
|
||||
"""Some URLs have a query string, e.g.:
|
||||
|
||||
|
|
@ -125,7 +296,7 @@ def split_url_extension(path):
|
|||
prefix, ext, suffix = path, '', ''
|
||||
|
||||
# Strip off sourceforge download suffix.
|
||||
match = re.search(r'((?:sourceforge.net|sf.net)/.*)(/download)$', path)
|
||||
match = re.search(r'((?:sourceforge\.net|sf\.net)/.*)(/download)$', path)
|
||||
if match:
|
||||
prefix, suffix = match.groups()
|
||||
|
||||
|
|
@ -189,8 +360,20 @@ def parse_version_offset(path):
|
|||
path, ext, suffix = split_url_extension(path)
|
||||
|
||||
# stem: Everything from path after the final '/'
|
||||
stem = os.path.basename(path)
|
||||
offset = len(path) - len(stem)
|
||||
original_stem = os.path.basename(path)
|
||||
|
||||
# Try to strip off anything after the version number
|
||||
stem = strip_version_suffixes(original_stem)
|
||||
|
||||
# Assumptions:
|
||||
#
|
||||
# 1. version always comes after the name
|
||||
# 2. separators include '-', '_', and '.'
|
||||
# 3. names can contain A-Z, a-z, 0-9, '+', separators
|
||||
# 4. versions can contain A-Z, a-z, 0-9, separators
|
||||
# 5. versions always start with a digit
|
||||
# 6. versions are often prefixed by a 'v' character
|
||||
# 7. separators are most reliable to determine name/version boundaries
|
||||
|
||||
# List of the following format:
|
||||
#
|
||||
|
|
@ -202,87 +385,118 @@ def parse_version_offset(path):
|
|||
# The first regex that matches string will be used to determine
|
||||
# the version of the package. Thefore, hyperspecific regexes should
|
||||
# come first while generic, catch-all regexes should come last.
|
||||
# With that said, regular expressions are slow, so if possible, put
|
||||
# ones that only catch one or two URLs at the bottom.
|
||||
version_regexes = [
|
||||
# GitHub tarballs, e.g. v1.2.3
|
||||
(r'github.com/.+/(?:zip|tar)ball/v?((\d+\.)+\d+)$', path),
|
||||
# 1st Pass: Simplest case
|
||||
# Assume name contains no digits and version contains no letters
|
||||
# e.g. libpng-1.6.27
|
||||
(r'^[a-zA-Z+._-]+[._-]v?(\d[\d._-]*)$', stem),
|
||||
|
||||
# e.g. https://github.com/sam-github/libnet/tarball/libnet-1.1.4
|
||||
(r'github.com/.+/(?:zip|tar)ball/.*-((\d+\.)+\d+)$', path),
|
||||
# 2nd Pass: Version only
|
||||
# Assume version contains no letters
|
||||
|
||||
# e.g. https://github.com/isaacs/npm/tarball/v0.2.5-1
|
||||
(r'github.com/.+/(?:zip|tar)ball/v?((\d+\.)+\d+-(\d+))$', path),
|
||||
# ver
|
||||
# e.g. 3.2.7, 7.0.2-7, v3.3.0, v1_6_3
|
||||
(r'^v?(\d[\d._-]*)$', stem),
|
||||
|
||||
# e.g. https://github.com/petdance/ack/tarball/1.93_02
|
||||
(r'github.com/.+/(?:zip|tar)ball/v?((\d+\.)+\d+_(\d+))$', path),
|
||||
# 3rd Pass: No separator characters are used
|
||||
# Assume name contains no digits
|
||||
|
||||
# Yorick is very special.
|
||||
# e.g. https://github.com/dhmunro/yorick/archive/y_2_2_04.tar.gz
|
||||
(r'github.com/[^/]+/yorick/archive/y_(\d+(?:_\d+)*)$', path),
|
||||
# namever
|
||||
# e.g. turbolinux702, nauty26r7
|
||||
(r'^[a-zA-Z+]*(\d[\da-zA-Z]*)$', stem),
|
||||
|
||||
# e.g. https://github.com/hpc/lwgrp/archive/v1.0.1.tar.gz
|
||||
(r'github.com/[^/]+/[^/]+/archive/(?:release-)?v?(\w+(?:[.-]\w+)*)$', path), # noqa
|
||||
# 4th Pass: A single separator character is used
|
||||
# Assume name contains no digits
|
||||
|
||||
# e.g. https://github.com/erlang/otp/tarball/OTP_R15B01 (erlang style)
|
||||
(r'[-_](R\d+[AB]\d*(-\d+)?)', path),
|
||||
# name-name-ver-ver
|
||||
# e.g. panda-2016-03-07, gts-snapshot-121130, cdd-061a
|
||||
(r'^[a-zA-Z+-]*(\d[\da-zA-Z-]*)$', stem),
|
||||
|
||||
# e.g., https://github.com/hpc/libcircle/releases/download/0.2.1-rc.1/libcircle-0.2.1-rc.1.tar.gz
|
||||
# e.g.,
|
||||
# https://github.com/hpc/mpileaks/releases/download/v1.0/mpileaks-1.0.tar.gz
|
||||
(r'github.com/[^/]+/[^/]+/releases/download/v?([^/]+)/.*$', path),
|
||||
# name_name_ver_ver
|
||||
# e.g. tinyxml_2_6_2, boost_1_55_0, tbb2017_20161128, v1_6_3
|
||||
(r'^[a-zA-Z+_]*(\d[\da-zA-Z_]*)$', stem),
|
||||
|
||||
# GitLab syntax:
|
||||
# {baseUrl}{/organization}{/projectName}/repository/archive.{fileEnding}?ref={gitTag}
|
||||
# as with github releases, we hope a version can be found in the
|
||||
# git tag
|
||||
# Search dotted versions:
|
||||
# e.g., https://gitlab.kitware.com/vtk/vtk/repository/archive.tar.bz2?ref=v7.0.0
|
||||
# e.g., https://example.com/org/repo/repository/archive.tar.bz2?ref=SomePrefix-2.1.1
|
||||
# e.g., http://apps.fz-juelich.de/jsc/sionlib/download.php?version=1.7.1
|
||||
(r'\?ref=(?:.*-|v)*((\d+\.)+\d+).*$', suffix),
|
||||
(r'\?version=((\d+\.)+\d+)', suffix),
|
||||
# name.name.ver.ver
|
||||
# e.g. prank.source.150803, jpegsrc.v9b, atlas3.11.34, geant4.10.01.p03
|
||||
(r'^[a-zA-Z+.]*(\d[\da-zA-Z.]*)$', stem),
|
||||
|
||||
# e.g. boost_1_39_0
|
||||
(r'((\d+_)+\d+)$', stem),
|
||||
# 5th Pass: Two separator characters are used
|
||||
# Name may contain digits, version may contain letters
|
||||
|
||||
# e.g. foobar-4.5.1-1
|
||||
# e.g. ruby-1.9.1-p243
|
||||
(r'-((\d+\.)*\d\.\d+-(p|rc|RC)?\d+)(?:[-._](?:bin|dist|stable|src|sources))?$', stem), # noqa
|
||||
# name-name-ver.ver
|
||||
# e.g. m4-1.4.17, gmp-6.0.0a, launchmon-v1.0.2
|
||||
(r'^[a-zA-Z\d+-]+-v?(\d[\da-zA-Z.]*)$', stem),
|
||||
|
||||
# e.g. lame-398-1
|
||||
(r'-((\d)+-\d)', stem),
|
||||
# name-name-ver_ver
|
||||
# e.g. icu4c-57_1
|
||||
(r'^[a-zA-Z\d+-]+-v?(\d[\da-zA-Z_]*)$', stem),
|
||||
|
||||
# e.g. foobar_1.2-3 or 3.98-1.4
|
||||
(r'_((\d+\.)+\d+(-(\d+(\.\d+)?))?[a-z]?)', stem),
|
||||
# name_name_ver.ver
|
||||
# e.g. superlu_dist_4.1, pexsi_v0.9.0
|
||||
(r'^[a-zA-Z\d+_]+_v?(\d[\da-zA-Z.]*)$', stem),
|
||||
|
||||
# e.g. foobar-4.5.1
|
||||
(r'-((\d+\.)*\d+)$', stem),
|
||||
# name_name.ver.ver
|
||||
# e.g. fer_source.v696
|
||||
(r'^[a-zA-Z\d+_]+\.v?(\d[\da-zA-Z.]*)$', stem),
|
||||
|
||||
# e.g. foobar-4.5.1b, foobar4.5RC, foobar.v4.5.1b
|
||||
(r'[-._]?v?((\d+\.)*\d+[-._]?([a-z]|rc|RC|tp|TP?)\d*)$', stem),
|
||||
# name-name-ver.ver-ver.ver
|
||||
# e.g. sowing-1.1.23-p1, bib2xhtml-v3.0-15-gf506, 4.6.3-alpha04
|
||||
(r'^(?:[a-zA-Z\d+-]+-)?v?(\d[\da-zA-Z.-]*)$', stem),
|
||||
|
||||
# e.g. foobar-4.5.0-beta1, or foobar-4.50-beta
|
||||
(r'-((\d+\.)*\d+-beta(\d+)?)$', stem),
|
||||
# namever.ver-ver.ver
|
||||
# e.g. go1.4-bootstrap-20161024
|
||||
(r'^[a-zA-Z+]+v?(\d[\da-zA-Z.-]*)$', stem),
|
||||
|
||||
# e.g. foobar4.5.1
|
||||
(r'((\d+\.)*\d+)$', stem),
|
||||
# 6th Pass: All three separator characters are used
|
||||
# Name may contain digits, version may contain letters
|
||||
|
||||
# e.g. foobar-4.5.0-bin
|
||||
(r'-((\d+\.)+\d+[a-z]?)[-._](bin|dist|stable|src|sources?)$', stem),
|
||||
# name_name-ver.ver
|
||||
# e.g. the_silver_searcher-0.32.0, sphinx_rtd_theme-0.1.10a0
|
||||
(r'^[a-zA-Z\d+_]+-v?(\d[\da-zA-Z.]*)$', stem),
|
||||
|
||||
# e.g. dash_0.5.5.1.orig.tar.gz (Debian style)
|
||||
(r'_((\d+\.)+\d+[a-z]?)[.]orig$', stem),
|
||||
# name.name_ver.ver-ver.ver
|
||||
# e.g. TH.data_1.0-8, XML_3.98-1.4
|
||||
(r'^[a-zA-Z\d+.]+_v?(\d[\da-zA-Z.-]*)$', stem),
|
||||
|
||||
# e.g. http://www.openssl.org/source/openssl-0.9.8s.tar.gz
|
||||
(r'-v?([^-]+(-alpha|-beta)?)', stem),
|
||||
# name-name-ver.ver_ver.ver
|
||||
# e.g. pypar-2.1.5_108
|
||||
(r'^[a-zA-Z\d+-]+-v?(\d[\da-zA-Z._]*)$', stem),
|
||||
|
||||
# e.g. astyle_1.23_macosx.tar.gz
|
||||
(r'_([^_]+(_alpha|_beta)?)', stem),
|
||||
# name.name_name-ver.ver
|
||||
# e.g. tap.py-1.6, backports.ssl_match_hostname-3.5.0.1
|
||||
(r'^[a-zA-Z\d+._]+-v?(\d[\da-zA-Z.]*)$', stem),
|
||||
|
||||
# e.g. http://mirrors.jenkins-ci.org/war/1.486/jenkins.war
|
||||
(r'\/(\d\.\d+)\/', path),
|
||||
# name-namever.ver_ver.ver
|
||||
# e.g. STAR-CCM+11.06.010_02
|
||||
(r'^[a-zA-Z+-]+(\d[\da-zA-Z._]*)$', stem),
|
||||
|
||||
# e.g. http://www.ijg.org/files/jpegsrc.v8d.tar.gz
|
||||
(r'\.v(\d+[a-z]?)', stem)
|
||||
# 7th Pass: Specific VCS
|
||||
|
||||
# bazaar
|
||||
# e.g. libvterm-0+bzr681
|
||||
(r'bzr(\d[\da-zA-Z._-]*)$', stem),
|
||||
|
||||
# 8th Pass: Version in path
|
||||
|
||||
# github.com/repo/name/releases/download/vver/name
|
||||
# e.g. https://github.com/nextflow-io/nextflow/releases/download/v0.20.1/nextflow
|
||||
(r'github\.com/[^/]+/[^/]+/releases/download/[a-zA-Z+._-]*v?(\d[\da-zA-Z._-]*)/', path), # noqa
|
||||
|
||||
# 9th Pass: Query strings
|
||||
|
||||
# e.g. http://gitlab.cosma.dur.ac.uk/swift/swiftsim/repository/archive.tar.gz?ref=v0.3.0
|
||||
(r'\?ref=[a-zA-Z+._-]*v?(\d[\da-zA-Z._-]*)$', suffix),
|
||||
|
||||
# e.g. http://apps.fz-juelich.de/jsc/sionlib/download.php?version=1.7.1
|
||||
(r'\?version=v?(\d[\da-zA-Z._-]*)$', suffix),
|
||||
|
||||
# e.g. http://slepc.upv.es/download/download.php?filename=slepc-3.6.2.tar.gz
|
||||
(r'\?filename=[a-zA-Z\d+-]+-v?(\d[\da-zA-Z.]*)$', stem),
|
||||
|
||||
# e.g. http://wwwpub.zih.tu-dresden.de/%7Emlieber/dcount/dcount.php?package=otf&get=OTF-1.12.5salmon.tar.gz
|
||||
(r'\?package=[a-zA-Z\d+-]+&get=[a-zA-Z\d+-]+-v?(\d[\da-zA-Z.]*)$', stem), # noqa
|
||||
]
|
||||
|
||||
for i, version_regex in enumerate(version_regexes):
|
||||
|
|
@ -292,9 +506,15 @@ def parse_version_offset(path):
|
|||
version = match.group(1)
|
||||
start = match.start(1)
|
||||
|
||||
# if we matched from the basename, then add offset in.
|
||||
# If we matched from the stem or suffix, we need to add offset
|
||||
offset = 0
|
||||
if match_string is stem:
|
||||
start += offset
|
||||
offset = len(path) - len(original_stem)
|
||||
elif match_string is suffix:
|
||||
offset = len(path)
|
||||
if ext:
|
||||
offset += len(ext) + 1 # .tar.gz is converted to tar.gz
|
||||
start += offset
|
||||
|
||||
return version, start, len(version), i, regex
|
||||
|
||||
|
|
@ -342,7 +562,7 @@ def parse_name_offset(path, v=None):
|
|||
except UndetectableVersionError:
|
||||
# Not all URLs contain a version. We still want to be able
|
||||
# to determine a name if possible.
|
||||
v = ''
|
||||
v = 'unknown'
|
||||
|
||||
# path: The prefix of the URL, everything before the ext and suffix
|
||||
# ext: The file extension
|
||||
|
|
@ -350,8 +570,10 @@ def parse_name_offset(path, v=None):
|
|||
path, ext, suffix = split_url_extension(path)
|
||||
|
||||
# stem: Everything from path after the final '/'
|
||||
stem = os.path.basename(path)
|
||||
offset = len(path) - len(stem)
|
||||
original_stem = os.path.basename(path)
|
||||
|
||||
# Try to strip off anything after the package name
|
||||
stem = strip_name_suffixes(original_stem, v)
|
||||
|
||||
# List of the following format:
|
||||
#
|
||||
|
|
@ -363,26 +585,45 @@ def parse_name_offset(path, v=None):
|
|||
# The first regex that matches string will be used to determine
|
||||
# the name of the package. Thefore, hyperspecific regexes should
|
||||
# come first while generic, catch-all regexes should come last.
|
||||
# With that said, regular expressions are slow, so if possible, put
|
||||
# ones that only catch one or two URLs at the bottom.
|
||||
name_regexes = [
|
||||
(r'/sourceforge/([^/]+)/', path),
|
||||
(r'github.com/[^/]+/[^/]+/releases/download/%s/(.*)-%s$' %
|
||||
(v, v), path),
|
||||
(r'/([^/]+)/(tarball|zipball)/', path),
|
||||
(r'/([^/]+)[_.-](bin|dist|stable|src|sources)[_.-]%s' % v, path),
|
||||
(r'github.com/[^/]+/([^/]+)/archive', path),
|
||||
(r'github.com/[^/]+/([^/]+)/releases', path),
|
||||
(r'[^/]+/([^/]+)/repository/archive', path), # gitlab
|
||||
(r'([^/]+)/download.php', path),
|
||||
# 1st Pass: Common repositories
|
||||
|
||||
(r'([^/]+)[_.-]v?%s' % v, stem), # prefer the stem
|
||||
(r'([^/]+)%s' % v, stem),
|
||||
# GitHub: github.com/repo/name/
|
||||
# e.g. https://github.com/nco/nco/archive/4.6.2.tar.gz
|
||||
(r'github\.com/[^/]+/([^/]+)', path),
|
||||
|
||||
# accept the path if name is not in stem.
|
||||
(r'/([^/]+)[_.-]v?%s' % v, path),
|
||||
(r'/([^/]+)%s' % v, path),
|
||||
# GitLab: gitlab.*/repo/name/
|
||||
# e.g. http://gitlab.cosma.dur.ac.uk/swift/swiftsim/repository/archive.tar.gz?ref=v0.3.0
|
||||
(r'gitlab[^/]+/[^/]+/([^/]+)', path),
|
||||
|
||||
(r'^([^/]+)[_.-]v?%s' % v, path),
|
||||
(r'^([^/]+)%s' % v, path)
|
||||
# Bitbucket: bitbucket.org/repo/name/
|
||||
# e.g. https://bitbucket.org/glotzer/hoomd-blue/get/v1.3.3.tar.bz2
|
||||
(r'bitbucket\.org/[^/]+/([^/]+)', path),
|
||||
|
||||
# PyPI: pypi.(python.org|io)/packages/source/first-letter/name/
|
||||
# e.g. https://pypi.python.org/packages/source/m/mpmath/mpmath-all-0.19.tar.gz
|
||||
# e.g. https://pypi.io/packages/source/b/backports.ssl_match_hostname/backports.ssl_match_hostname-3.5.0.1.tar.gz
|
||||
(r'pypi\.(?:python\.org|io)/packages/source/[A-Za-z\d]/([^/]+)', path),
|
||||
|
||||
# 2nd Pass: Query strings
|
||||
|
||||
# ?filename=name-ver.ver
|
||||
# e.g. http://slepc.upv.es/download/download.php?filename=slepc-3.6.2.tar.gz
|
||||
(r'\?filename=([A-Za-z\d+-]+)$', stem),
|
||||
|
||||
# ?package=name
|
||||
# e.g. http://wwwpub.zih.tu-dresden.de/%7Emlieber/dcount/dcount.php?package=otf&get=OTF-1.12.5salmon.tar.gz
|
||||
(r'\?package=([A-Za-z\d+-]+)', stem),
|
||||
|
||||
# download.php
|
||||
# e.g. http://apps.fz-juelich.de/jsc/sionlib/download.php?version=1.7.1
|
||||
(r'([^/]+)/download.php$', path),
|
||||
|
||||
# 3rd Pass: Name followed by version in archive
|
||||
|
||||
(r'^([A-Za-z\d+\._-]+)$', stem),
|
||||
]
|
||||
|
||||
for i, name_regex in enumerate(name_regexes):
|
||||
|
|
@ -392,13 +633,15 @@ def parse_name_offset(path, v=None):
|
|||
name = match.group(1)
|
||||
start = match.start(1)
|
||||
|
||||
# if we matched from the basename, then add offset in.
|
||||
# If we matched from the stem or suffix, we need to add offset
|
||||
offset = 0
|
||||
if match_string is stem:
|
||||
start += offset
|
||||
|
||||
# package names should be lowercase and separated by dashes.
|
||||
name = name.lower()
|
||||
name = re.sub('[_.]', '-', name)
|
||||
offset = len(path) - len(original_stem)
|
||||
elif match_string is suffix:
|
||||
offset = len(path)
|
||||
if ext:
|
||||
offset += len(ext) + 1 # .tar.gz is converted to tar.gz
|
||||
start += offset
|
||||
|
||||
return name, start, len(name), i, regex
|
||||
|
||||
|
|
@ -431,6 +674,9 @@ def parse_name_and_version(path):
|
|||
The version of the package
|
||||
|
||||
:rtype: tuple
|
||||
|
||||
:raises UndetectableVersionError: If the URL does not match any regexes
|
||||
:raises UndetectableNameError: If the URL does not match any regexes
|
||||
"""
|
||||
ver = parse_version(path)
|
||||
name = parse_name(path, ver)
|
||||
|
|
@ -457,6 +703,22 @@ def cumsum(elts, init=0, fn=lambda x: x):
|
|||
return sums
|
||||
|
||||
|
||||
def find_all(substring, string):
|
||||
"""Returns a list containing the indices of
|
||||
every occurrence of substring in string."""
|
||||
|
||||
occurrences = []
|
||||
index = 0
|
||||
while index < len(string):
|
||||
index = string.find(substring, index)
|
||||
if index == -1:
|
||||
break
|
||||
occurrences.append(index)
|
||||
index += len(substring)
|
||||
|
||||
return occurrences
|
||||
|
||||
|
||||
def substitution_offsets(path):
|
||||
"""This returns offsets for substituting versions and names in the
|
||||
provided path. It is a helper for :func:`substitute_version`.
|
||||
|
|
@ -468,65 +730,34 @@ def substitution_offsets(path):
|
|||
except UndetectableNameError:
|
||||
return (None, -1, -1, (), ver, vs, vl, (vs,))
|
||||
except UndetectableVersionError:
|
||||
return (None, -1, -1, (), None, -1, -1, ())
|
||||
try:
|
||||
name, ns, nl, ni, nregex = parse_name_offset(path)
|
||||
return (name, ns, nl, (ns,), None, -1, -1, ())
|
||||
except UndetectableNameError:
|
||||
return (None, -1, -1, (), None, -1, -1, ())
|
||||
|
||||
# protect extensions like bz2 from getting inadvertently
|
||||
# considered versions.
|
||||
path = comp.strip_extension(path)
|
||||
# Find the index of every occurrence of name and ver in path
|
||||
name_offsets = find_all(name, path)
|
||||
ver_offsets = find_all(ver, path)
|
||||
|
||||
# Construct a case-insensitive regular expression for the package name.
|
||||
name_re = '(%s)' % insensitize(name)
|
||||
|
||||
# Split the string apart by things that match the name so that if the
|
||||
# name contains numbers or things that look like versions, we don't
|
||||
# accidentally substitute them with a version.
|
||||
name_parts = re.split(name_re, path)
|
||||
|
||||
offsets = cumsum(name_parts, 0, len)
|
||||
name_offsets = offsets[1::2]
|
||||
|
||||
ver_offsets = []
|
||||
for i in range(0, len(name_parts), 2):
|
||||
vparts = re.split(ver, name_parts[i])
|
||||
voffsets = cumsum(vparts, offsets[i], len)
|
||||
ver_offsets.extend(voffsets[1::2])
|
||||
|
||||
return (name, ns, nl, tuple(name_offsets),
|
||||
ver, vs, vl, tuple(ver_offsets))
|
||||
return (name, ns, nl, name_offsets,
|
||||
ver, vs, vl, ver_offsets)
|
||||
|
||||
|
||||
def wildcard_version(path):
|
||||
"""Find the version in the supplied path, and return a regular expression
|
||||
that will match this path with any version in its place.
|
||||
"""
|
||||
# Get name and version, so we can treat them specially
|
||||
name, v = parse_name_and_version(path)
|
||||
# Get version so we can replace it with a wildcard
|
||||
version = parse_version(path)
|
||||
|
||||
path, ext, suffix = split_url_extension(path)
|
||||
# Split path by versions
|
||||
vparts = path.split(str(version))
|
||||
|
||||
# Construct a case-insensitive regular expression for the package name.
|
||||
name_re = '(%s)' % insensitize(name)
|
||||
# Replace each version with a generic capture group to find versions
|
||||
# and escape everything else so it's not interpreted as a regex
|
||||
result = '(\d.*)'.join(re.escape(vp) for vp in vparts)
|
||||
|
||||
# Split the string apart by things that match the name so that if the
|
||||
# name contains numbers or things that look like versions, we don't
|
||||
# catch them with the version wildcard.
|
||||
name_parts = re.split(name_re, path)
|
||||
|
||||
# Even elements in the array did *not* match the name
|
||||
for i in range(0, len(name_parts), 2):
|
||||
# Split each part by things that look like versions.
|
||||
vparts = re.split(v.wildcard(), name_parts[i])
|
||||
|
||||
# Replace each version with a generic capture group to find versions.
|
||||
# And escape everything else so it's not interpreted as a regex
|
||||
vgroup = '(%s)' % v.wildcard()
|
||||
name_parts[i] = vgroup.join(re.escape(vp) for vp in vparts)
|
||||
|
||||
# Put it all back together with original name matches intact.
|
||||
result = ''.join(name_parts)
|
||||
if ext:
|
||||
result += '.' + ext
|
||||
result += suffix
|
||||
return result
|
||||
|
||||
|
||||
|
|
|
|||
|
|
@ -39,6 +39,7 @@
|
|||
'validate_fully_qualified_module_name',
|
||||
'validate_module_name',
|
||||
'possible_spack_module_names',
|
||||
'simplify_name',
|
||||
'NamespaceTrie']
|
||||
|
||||
# Valid module names can contain '-' but can't start with it.
|
||||
|
|
@ -108,6 +109,50 @@ def possible_spack_module_names(python_mod_name):
|
|||
return results
|
||||
|
||||
|
||||
def simplify_name(name):
|
||||
"""Simplifies a name which may include uppercase letters, periods,
|
||||
underscores, and pluses. In general, we want our package names to
|
||||
only contain lowercase letters, digits, and dashes.
|
||||
|
||||
:param str name: The original name of the package
|
||||
:return: The new name of the package
|
||||
:rtype: str
|
||||
"""
|
||||
# Convert CamelCase to Dashed-Names
|
||||
# e.g. ImageMagick -> Image-Magick
|
||||
# e.g. SuiteSparse -> Suite-Sparse
|
||||
# name = re.sub('([a-z])([A-Z])', r'\1-\2', name)
|
||||
|
||||
# Rename Intel downloads
|
||||
# e.g. l_daal, l_ipp, l_mkl -> daal, ipp, mkl
|
||||
if name.startswith('l_'):
|
||||
name = name[2:]
|
||||
|
||||
# Convert UPPERCASE to lowercase
|
||||
# e.g. SAMRAI -> samrai
|
||||
name = name.lower()
|
||||
|
||||
# Replace '_' and '.' with '-'
|
||||
# e.g. backports.ssl_match_hostname -> backports-ssl-match-hostname
|
||||
name = name.replace('_', '-')
|
||||
name = name.replace('.', '-')
|
||||
|
||||
# Replace "++" with "pp" and "+" with "-plus"
|
||||
# e.g. gtk+ -> gtk-plus
|
||||
# e.g. voro++ -> voropp
|
||||
name = name.replace('++', 'pp')
|
||||
name = name.replace('+', '-plus')
|
||||
|
||||
# Simplify Lua package names
|
||||
# We don't want "lua" to occur multiple times in the name
|
||||
name = re.sub('^(lua)([^-])', r'\1-\2', name)
|
||||
|
||||
# Simplify Bio++ package names
|
||||
name = re.sub('^(bpp)([^-])', r'\1-\2', name)
|
||||
|
||||
return name
|
||||
|
||||
|
||||
def valid_module_name(mod_name):
|
||||
"""Return whether mod_name is valid for use in Spack."""
|
||||
return bool(re.match(_valid_module_re, mod_name))
|
||||
|
|
|
|||
|
|
@ -268,6 +268,14 @@ def find_versions_of_archive(archive_urls, list_url=None, list_depth=0):
|
|||
# part, not the full path.
|
||||
url_regex = os.path.basename(url_regex)
|
||||
|
||||
# We need to add a / to the beginning of the regex to prevent
|
||||
# Spack from picking up similarly named packages like:
|
||||
# https://cran.r-project.org/src/contrib/pls_2.6-0.tar.gz
|
||||
# https://cran.r-project.org/src/contrib/enpls_5.7.tar.gz
|
||||
# https://cran.r-project.org/src/contrib/autopls_1.3.tar.gz
|
||||
# https://cran.r-project.org/src/contrib/matrixpls_1.0.4.tar.gz
|
||||
url_regex = '/' + url_regex
|
||||
|
||||
# We need to add a $ anchor to the end of the regex to prevent
|
||||
# Spack from picking up signature files like:
|
||||
# .asc
|
||||
|
|
@ -275,7 +283,9 @@ def find_versions_of_archive(archive_urls, list_url=None, list_depth=0):
|
|||
# .sha256
|
||||
# .sig
|
||||
# However, SourceForge downloads still need to end in '/download'.
|
||||
regexes.append(url_regex + '(\/download)?$')
|
||||
url_regex += '(\/download)?$'
|
||||
|
||||
regexes.append(url_regex)
|
||||
|
||||
# Build a dict version -> URL from any links that match the wildcards.
|
||||
versions = {}
|
||||
|
|
|
|||
|
|
@ -194,35 +194,6 @@ def satisfies(self, other):
|
|||
nother = len(other.version)
|
||||
return nother <= nself and self.version[:nother] == other.version
|
||||
|
||||
def wildcard(self):
|
||||
"""Create a regex that will match variants of this version string."""
|
||||
def a_or_n(seg):
|
||||
if type(seg) == int:
|
||||
return r'[0-9]+'
|
||||
else:
|
||||
return r'[a-zA-Z]+'
|
||||
|
||||
version = self.version
|
||||
|
||||
# Use a wildcard for separators, in case a version is written
|
||||
# two different ways (e.g., boost writes 1_55_0 and 1.55.0)
|
||||
sep_re = '[_.-]'
|
||||
separators = ('',) + (sep_re,) * len(self.separators)
|
||||
|
||||
version += (version[-1],) * 2
|
||||
separators += (sep_re,) * 2
|
||||
|
||||
segments = [a_or_n(seg) for seg in version]
|
||||
|
||||
wc = segments[0]
|
||||
for i in range(1, len(separators)):
|
||||
wc += '(?:' + separators[i] + segments[i]
|
||||
|
||||
# Add possible alpha or beta indicator at the end of each segemnt
|
||||
# We treat these specially b/c they're so common.
|
||||
wc += '(?:[a-z]|alpha|beta)?)?' * (len(segments) - 1)
|
||||
return wc
|
||||
|
||||
def __iter__(self):
|
||||
return iter(self.version)
|
||||
|
||||
|
|
|
|||
|
|
@ -732,20 +732,21 @@ function _spack_url {
|
|||
then
|
||||
compgen -W "-h --help" -- "$cur"
|
||||
else
|
||||
compgen -W "list parse test" -- "$cur"
|
||||
compgen -W "list parse summary" -- "$cur"
|
||||
fi
|
||||
}
|
||||
|
||||
function _spack_url_list {
|
||||
compgen -W "-h --help -c --color -e --extrapolation -n --incorrect-name
|
||||
-v --incorrect-version" -- "$cur"
|
||||
compgen -W "-h --help -c --color -e --extrapolation
|
||||
-n --incorrect-name -N --correct-name
|
||||
-v --incorrect-version -V --correct-version" -- "$cur"
|
||||
}
|
||||
|
||||
function _spack_url_parse {
|
||||
compgen -W "-h --help -s --spider" -- "$cur"
|
||||
}
|
||||
|
||||
function _spack_url_test {
|
||||
function _spack_url_summary {
|
||||
compgen -W "-h --help" -- "$cur"
|
||||
}
|
||||
|
||||
|
|
|
|||
|
|
@ -29,7 +29,7 @@ class Automake(AutotoolsPackage):
|
|||
"""Automake -- make file builder part of autotools"""
|
||||
|
||||
homepage = 'http://www.gnu.org/software/automake/'
|
||||
url = 'http://ftp.gnu.org/gnu/automake/automake-1.14.tar.gz'
|
||||
url = 'http://ftp.gnu.org/gnu/automake/automake-1.15.tar.gz'
|
||||
|
||||
version('1.15', '716946a105ca228ab545fc37a70df3a3')
|
||||
version('1.14.1', 'd052a3e884631b9c7892f2efce542d75')
|
||||
|
|
|
|||
|
|
@ -33,9 +33,6 @@ class Bib2xhtml(Package):
|
|||
|
||||
version('3.0-15-gf506', 'a26ba02fe0053bbbf2277bdf0acf8645')
|
||||
|
||||
def url_for_version(self, v):
|
||||
return ('http://www.spinellis.gr/sw/textproc/bib2xhtml/bib2xhtml-v%s.tar.gz' % v)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# Add the bst include files to the install directory
|
||||
bst_include = join_path(prefix.share, 'bib2xhtml')
|
||||
|
|
|
|||
|
|
@ -31,7 +31,7 @@ class Bison(AutotoolsPackage):
|
|||
generalized LR (GLR) parser employing LALR(1) parser tables."""
|
||||
|
||||
homepage = "http://www.gnu.org/software/bison/"
|
||||
url = "http://ftp.gnu.org/gnu/bison/bison-3.0.tar.gz"
|
||||
url = "http://ftp.gnu.org/gnu/bison/bison-3.0.4.tar.gz"
|
||||
|
||||
version('3.0.4', 'a586e11cd4aff49c3ff6d3b6a4c9ccf8')
|
||||
version('2.7', 'ded660799e76fb1667d594de1f7a0da9')
|
||||
|
|
|
|||
|
|
@ -39,14 +39,9 @@
|
|||
class BlastPlus(AutotoolsPackage):
|
||||
"""Basic Local Alignment Search Tool."""
|
||||
|
||||
|
||||
homepage = "http://blast.ncbi.nlm.nih.gov/"
|
||||
url = "https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.6.0/ncbi-blast-2.6.0+-src.tar.gz"
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/{0}/ncbi-blast-{0}+-src.tar.gz"
|
||||
return url.format(version)
|
||||
|
||||
version('2.6.0', 'c8ce8055b10c4d774d995f88c7cc6225')
|
||||
version('2.2.30', 'f8e9a5eb368173142fe6867208b73715')
|
||||
|
||||
|
|
|
|||
|
|
@ -141,14 +141,8 @@ class Boost(Package):
|
|||
patch('xl_1_62_0_le.patch', when='@1.62.0%xl')
|
||||
|
||||
def url_for_version(self, version):
|
||||
"""
|
||||
Handle Boost's weird URLs,
|
||||
which write the version two different ways.
|
||||
"""
|
||||
parts = [str(p) for p in Version(version)]
|
||||
dots = ".".join(parts)
|
||||
underscores = "_".join(parts)
|
||||
return "http://downloads.sourceforge.net/project/boost/boost/%s/boost_%s.tar.bz2" % (dots, underscores)
|
||||
url = "http://downloads.sourceforge.net/project/boost/boost/{0}/boost_{1}.tar.bz2"
|
||||
return url.format(version.dotted, version.underscored)
|
||||
|
||||
def determine_toolset(self, spec):
|
||||
if spec.satisfies("platform=darwin"):
|
||||
|
|
|
|||
|
|
@ -29,7 +29,10 @@
|
|||
class Bowtie2(Package):
|
||||
"""Bowtie 2 is an ultrafast and memory-efficient tool for aligning
|
||||
sequencing reads to long reference sequences"""
|
||||
|
||||
homepage = "bowtie-bio.sourceforge.net/bowtie2/index.shtml"
|
||||
url = "http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.3.1/bowtie2-2.3.1-source.zip"
|
||||
|
||||
version('2.3.1', 'b4efa22612e98e0c23de3d2c9f2f2478')
|
||||
version('2.2.5', '51fa97a862d248d7ee660efc1147c75f')
|
||||
|
||||
|
|
@ -38,10 +41,6 @@ class Bowtie2(Package):
|
|||
patch('bowtie2-2.2.5.patch', when='@2.2.5', level=0)
|
||||
patch('bowtie2-2.3.1.patch', when='@2.3.1', level=0)
|
||||
|
||||
def url_for_version(self, version):
|
||||
url="http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/{0}/bowtie2-{0}-source.zip"
|
||||
return url.format(version)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
make()
|
||||
mkdirp(prefix.bin)
|
||||
|
|
|
|||
|
|
@ -31,19 +31,9 @@ class Cddlib(AutotoolsPackage):
|
|||
Method of Motzkin et al. for generating all vertices (i.e. extreme points)
|
||||
and extreme rays of a general convex polyhedron in R^d given by a system
|
||||
of linear inequalities"""
|
||||
homepage = "https://www.inf.ethz.ch/personal/fukudak/cdd_home/"
|
||||
# This is the original download url. It is currently down [2016-08-23],
|
||||
# but should be reinstated or updated once the issue is resolved.
|
||||
# url = "ftp://ftp.ifor.math.ethz.ch/pub/fukuda/cdd/cddlib-094h.tar.gz"
|
||||
url = "http://pkgs.fedoraproject.org/lookaside/pkgs/cddlib/cddlib-094h.tar.gz/1467d270860bbcb26d3ebae424690e7c/cddlib-094h.tar.gz"
|
||||
|
||||
def url_for_version(self, version):
|
||||
# Since the commit id is part of the version, we can't
|
||||
# auto-generate the string, and we need to explicitly list all
|
||||
# known versions here. Currently, there is only one version.
|
||||
if str(version) == '0.94h':
|
||||
return "http://pkgs.fedoraproject.org/lookaside/pkgs/cddlib/cddlib-094h.tar.gz/1467d270860bbcb26d3ebae424690e7c/cddlib-094h.tar.gz"
|
||||
raise InstallError("Unsupported version %s" % str(version))
|
||||
homepage = "https://www.inf.ethz.ch/personal/fukudak/cdd_home/"
|
||||
url = "ftp://ftp.math.ethz.ch/users/fukudak/cdd/cddlib-094h.tar.gz"
|
||||
|
||||
version('0.94h', '1467d270860bbcb26d3ebae424690e7c')
|
||||
|
||||
|
|
@ -51,3 +41,7 @@ def url_for_version(self, version):
|
|||
|
||||
depends_on("gmp")
|
||||
depends_on("libtool", type="build")
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "ftp://ftp.math.ethz.ch/users/fukudak/cdd/cddlib-{0}.tar.gz"
|
||||
return url.format(version.joined)
|
||||
|
|
|
|||
|
|
@ -30,9 +30,13 @@ class Cdo(Package):
|
|||
Climate and NWP model Data. """
|
||||
|
||||
homepage = "https://code.zmaw.de/projects/cdo"
|
||||
url = "https://code.zmaw.de/attachments/download/12760/cdo-1.7.2.tar.gz"
|
||||
list_url = "https://code.zmaw.de/projects/cdo/files"
|
||||
|
||||
version('1.7.2', 'f08e4ce8739a4f2b63fc81a24db3ee31', url='https://code.zmaw.de/attachments/download/12760/cdo-1.7.2.tar.gz')
|
||||
version('1.6.9', 'bf0997bf20e812f35e10188a930e24e2', url='https://code.zmaw.de/attachments/download/10198/cdo-1.6.9.tar.gz')
|
||||
version('1.7.2', 'f08e4ce8739a4f2b63fc81a24db3ee31',
|
||||
url='https://code.zmaw.de/attachments/download/12760/cdo-1.7.2.tar.gz')
|
||||
version('1.6.9', 'bf0997bf20e812f35e10188a930e24e2',
|
||||
url='https://code.zmaw.de/attachments/download/10198/cdo-1.6.9.tar.gz')
|
||||
|
||||
variant('szip', default=True, description='Enable szip compression for GRIB1')
|
||||
variant('hdf5', default=False, description='Enable HDF5 support')
|
||||
|
|
@ -54,7 +58,7 @@ class Cdo(Package):
|
|||
depends_on('proj', when='+proj')
|
||||
depends_on('curl', when='+curl')
|
||||
depends_on('fftw', when='+fftw')
|
||||
depends_on('magics', when='+magics')
|
||||
depends_on('magics', when='+magics')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
config_args = ["--prefix=" + prefix,
|
||||
|
|
|
|||
|
|
@ -31,6 +31,7 @@ class Cfitsio(AutotoolsPackage):
|
|||
"""
|
||||
|
||||
homepage = 'http://heasarc.gsfc.nasa.gov/fitsio/'
|
||||
url = 'http://heasarc.gsfc.nasa.gov/FTP/software/fitsio/c/cfitsio3410.tar.gz'
|
||||
|
||||
version('3.410', '8a4a66fcdd816aae41768baa0b025552')
|
||||
version('3.370', 'abebd2d02ba5b0503c633581e3bfa116')
|
||||
|
|
|
|||
|
|
@ -29,16 +29,13 @@ class Cppad(CMakePackage):
|
|||
"""A Package for Differentiation of C++ Algorithms."""
|
||||
|
||||
homepage = "https://www.coin-or.org/CppAD/"
|
||||
url = "http://www.coin-or.org/download/source/CppAD/cppad-20170114.gpl.tgz"
|
||||
|
||||
version('20170114', '565a534dc813fa1289764222cd8c11ea')
|
||||
version('develop', git='https://github.com/coin-or/CppAD.git')
|
||||
|
||||
depends_on('cmake', type='build')
|
||||
|
||||
def url_for_version(self, version):
|
||||
"""Handle version-based custom URLs."""
|
||||
return "http://www.coin-or.org/download/source/CppAD/cppad-%s.gpl.tgz" % (version)
|
||||
|
||||
def cmake_args(self):
|
||||
# This package does not obey CMAKE_INSTALL_PREFIX
|
||||
args = [
|
||||
|
|
|
|||
|
|
@ -36,6 +36,7 @@ class Cryptopp(Package):
|
|||
"""
|
||||
|
||||
homepage = "http://www.cryptopp.com"
|
||||
url = "http://www.cryptopp.com/cryptopp563.zip"
|
||||
|
||||
version('5.6.3', '3c5b70e2ec98b7a24988734446242d07')
|
||||
version('5.6.2', '7ed022585698df48e65ce9218f6c6a67')
|
||||
|
|
|
|||
|
|
@ -46,7 +46,6 @@ class Dakota(Package):
|
|||
|
||||
homepage = 'https://dakota.sandia.gov/'
|
||||
url = 'https://dakota.sandia.gov/sites/default/files/distributions/public/dakota-6.3-public.src.tar.gz'
|
||||
_url_str = 'https://dakota.sandia.gov/sites/default/files/distributions/public/dakota-{version}-public.src.tar.gz'
|
||||
|
||||
version('6.3', '05a58d209fae604af234c894c3f73f6d')
|
||||
|
||||
|
|
@ -64,9 +63,6 @@ class Dakota(Package):
|
|||
depends_on('boost')
|
||||
depends_on('cmake', type='build')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return Dakota._url_str.format(version=version)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
options = []
|
||||
options.extend(std_cmake_args)
|
||||
|
|
|
|||
|
|
@ -29,7 +29,7 @@ class Exonerate(Package):
|
|||
"""Pairwise sequence alignment of DNA and proteins"""
|
||||
|
||||
homepage = "http://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate"
|
||||
url = "http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz"
|
||||
url = "http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.4.0.tar.gz"
|
||||
|
||||
version('2.4.0', '126fbade003b80b663a1d530c56f1904')
|
||||
|
||||
|
|
|
|||
|
|
@ -31,11 +31,10 @@ class Ferret(Package):
|
|||
"""Ferret is an interactive computer visualization and analysis environment
|
||||
designed to meet the needs of oceanographers and meteorologists
|
||||
analyzing large and complex gridded data sets."""
|
||||
homepage = "http://ferret.noaa.gov/Ferret/"
|
||||
url = "ftp://ftp.pmel.noaa.gov/ferret/pub/source/fer_source.tar.gz"
|
||||
homepage = "http://ferret.pmel.noaa.gov/Ferret/home"
|
||||
url = "ftp://ftp.pmel.noaa.gov/ferret/pub/source/fer_source.v696.tar.gz"
|
||||
|
||||
version('6.96', '51722027c864369f41bab5751dfff8cc',
|
||||
url="ftp://ftp.pmel.noaa.gov/ferret/pub/source/fer_source.tar.gz")
|
||||
version('6.96', '51722027c864369f41bab5751dfff8cc')
|
||||
|
||||
depends_on("hdf5~mpi~fortran")
|
||||
depends_on("netcdf~mpi")
|
||||
|
|
@ -43,6 +42,10 @@ class Ferret(Package):
|
|||
depends_on("readline")
|
||||
depends_on("zlib")
|
||||
|
||||
def url_for_version(self, version):
|
||||
return "ftp://ftp.pmel.noaa.gov/ferret/pub/source/fer_source.v{0}.tar.gz".format(
|
||||
version.joined)
|
||||
|
||||
def patch(self):
|
||||
hdf5_prefix = self.spec['hdf5'].prefix
|
||||
netcdff_prefix = self.spec['netcdf-fortran'].prefix
|
||||
|
|
|
|||
|
|
@ -32,7 +32,9 @@ class GdkPixbuf(AutotoolsPackage):
|
|||
GTK+ 2 but it was split off into a separate package in
|
||||
preparation for the change to GTK+ 3."""
|
||||
homepage = "https://developer.gnome.org/gdk-pixbuf/"
|
||||
url = "http://ftp.gnome.org/pub/gnome/sources/gdk-pixbuf/2.31/gdk-pixbuf-2.31.1.tar.xz"
|
||||
url = "http://ftp.gnome.org/pub/gnome/sources/gdk-pixbuf/2.31/gdk-pixbuf-2.31.2.tar.xz"
|
||||
list_url = "http://ftp.acc.umu.se/pub/gnome/sources/gdk-pixbuf/"
|
||||
list_depth = 2
|
||||
|
||||
version('2.31.2', '6be6bbc4f356d4b79ab4226860ab8523')
|
||||
|
||||
|
|
|
|||
|
|
@ -89,13 +89,6 @@ def patch(self):
|
|||
r'# \1\2\3',
|
||||
)
|
||||
|
||||
@when('@1.5.0:')
|
||||
def patch(self):
|
||||
pass
|
||||
|
||||
def url_for_version(self, version):
|
||||
return "https://storage.googleapis.com/golang/go{0}.src.tar.gz".format(version)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
bash = which('bash')
|
||||
with working_dir('src'):
|
||||
|
|
|
|||
|
|
@ -52,10 +52,6 @@ class Gource(AutotoolsPackage):
|
|||
parallel = False
|
||||
force_autoreconf = True
|
||||
|
||||
def url_for_version(self, version):
|
||||
tmp = 'https://github.com/acaudwell/Gource/releases/download/gource-{0}/gource-{0}.tar.gz' # NOQA: ignore=E501
|
||||
return tmp.format(version.dotted)
|
||||
|
||||
def configure_args(self):
|
||||
spec = self.spec
|
||||
return [
|
||||
|
|
|
|||
|
|
@ -29,9 +29,9 @@ class Ibmisc(CMakePackage):
|
|||
"""Misc. reusable utilities used by IceBin."""
|
||||
|
||||
homepage = "https://github.com/citibeth/ibmisc"
|
||||
url = "https://github.com/citibeth/ibmisc/tarball/123"
|
||||
url = "https://github.com/citibeth/ibmisc/archive/v0.1.0.tar.gz"
|
||||
|
||||
version('0.1.0', '12f2a32432a11db48e00217df18e59fa')
|
||||
version('0.1.0', '18c63db3e466c5a6fc2db3f903d06ecb')
|
||||
|
||||
variant('everytrace', default=False,
|
||||
description='Report errors through Everytrace')
|
||||
|
|
|
|||
|
|
@ -30,7 +30,7 @@ class Icet(CMakePackage):
|
|||
sort-last parallel rendering library."""
|
||||
|
||||
homepage = "http://icet.sandia.gov"
|
||||
url = "https://example.com/icet-1.2.3.tar.gz"
|
||||
url = "https://gitlab.kitware.com/icet/icet/repository/archive.tar.bz2?ref=IceT-2.1.1"
|
||||
|
||||
version('develop', branch='master',
|
||||
git='https://gitlab.kitware.com/icet/icet.git')
|
||||
|
|
@ -38,9 +38,5 @@ class Icet(CMakePackage):
|
|||
|
||||
depends_on('mpi')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return ("https://gitlab.kitware.com/icet/icet/repository/"
|
||||
"archive.tar.bz2?ref=IceT-{0}".format(version.dotted))
|
||||
|
||||
def cmake_args(self):
|
||||
return ['-DICET_USE_OPENGL:BOOL=OFF']
|
||||
|
|
|
|||
|
|
@ -45,9 +45,6 @@ class ImageMagick(Package):
|
|||
depends_on('ghostscript')
|
||||
depends_on('ghostscript-fonts')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return "https://github.com/ImageMagick/ImageMagick/archive/{0}.tar.gz".format(version)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
gs_font_dir = join_path(spec['ghostscript-fonts'].prefix.share, "font")
|
||||
configure('--prefix={0}'.format(prefix),
|
||||
|
|
|
|||
|
|
@ -45,10 +45,10 @@ class Jdk(Package):
|
|||
'-H', # specify required License Agreement cookie
|
||||
'Cookie: oraclelicense=accept-securebackup-cookie']
|
||||
|
||||
version('8u66-linux-x64', '88f31f3d642c3287134297b8c10e61bf',
|
||||
version('8u66', '88f31f3d642c3287134297b8c10e61bf',
|
||||
url="http://download.oracle.com/otn-pub/java/jdk/8u66-b17/jdk-8u66-linux-x64.tar.gz",
|
||||
curl_options=curl_options)
|
||||
version('8u92-linux-x64', '65a1cc17ea362453a6e0eb4f13be76e4',
|
||||
version('8u92', '65a1cc17ea362453a6e0eb4f13be76e4',
|
||||
url="http://download.oracle.com/otn-pub/java/jdk/8u92-b14/jdk-8u92-linux-x64.tar.gz",
|
||||
curl_options=curl_options)
|
||||
|
||||
|
|
|
|||
|
|
@ -30,7 +30,11 @@ class Libedit(AutotoolsPackage):
|
|||
homepage = "http://thrysoee.dk/editline/"
|
||||
url = "http://thrysoee.dk/editline/libedit-20150325-3.1.tar.gz"
|
||||
|
||||
version('3.1', '43cdb5df3061d78b5e9d59109871b4f6',
|
||||
url="http://thrysoee.dk/editline/libedit-20150325-3.1.tar.gz")
|
||||
version('3.1-20160903', '0467d27684c453a351fbcefebbcb16a3')
|
||||
version('3.1-20150325', '43cdb5df3061d78b5e9d59109871b4f6')
|
||||
|
||||
depends_on('ncurses')
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "http://thrysoee.dk/editline/libedit-{0}-{1}.tar.gz"
|
||||
return url.format(version[-1], version.up_to(-1))
|
||||
|
|
|
|||
|
|
@ -56,7 +56,3 @@ class Libgd(AutotoolsPackage):
|
|||
depends_on('libpng')
|
||||
depends_on('libtiff')
|
||||
depends_on('fontconfig')
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "https://github.com/libgd/libgd/releases/download/gd-{0}/libgd-{0}.tar.gz"
|
||||
return url.format(version)
|
||||
|
|
|
|||
|
|
@ -30,6 +30,7 @@ class Libsodium(AutotoolsPackage):
|
|||
decryption, signatures, password hashing and more."""
|
||||
homepage = "https://download.libsodium.org/doc/"
|
||||
url = "https://download.libsodium.org/libsodium/releases/libsodium-1.0.11.tar.gz"
|
||||
list_url = "https://download.libsodium.org/libsodium/releases/old"
|
||||
|
||||
version('1.0.11', 'b58928d035064b2a46fb564937b83540')
|
||||
version('1.0.10', 'ea89dcbbda0b2b6ff6a1c476231870dd')
|
||||
|
|
|
|||
|
|
@ -31,9 +31,9 @@ class Libxstream(Package):
|
|||
conditions.'''
|
||||
|
||||
homepage = 'https://github.com/hfp/libxstream'
|
||||
url = 'https://github.com/hfp/libxstream.git'
|
||||
url = 'https://github.com/hfp/libxstream/archive/0.9.0.tar.gz'
|
||||
|
||||
version('0.9.0', git='https://github.com/hfp/libxstream.git')
|
||||
version('0.9.0', 'fd74b7cf5f145ff4925d91be2809571c')
|
||||
|
||||
def patch(self):
|
||||
kwargs = {'ignore_absent': False, 'backup': True, 'string': True}
|
||||
|
|
|
|||
|
|
@ -30,6 +30,8 @@ class Meep(Package):
|
|||
software package developed at MIT to model electromagnetic systems."""
|
||||
|
||||
homepage = "http://ab-initio.mit.edu/wiki/index.php/Meep"
|
||||
url = "http://ab-initio.mit.edu/meep/meep-1.3.tar.gz"
|
||||
list_url = "http://ab-initio.mit.edu/meep/old"
|
||||
|
||||
version('1.3', '18a5b9e18008627a0411087e0bb60db5')
|
||||
version('1.2.1', '9be2e743c3a832ae922de9d955d016c5')
|
||||
|
|
|
|||
|
|
@ -37,7 +37,8 @@ class Metis(Package):
|
|||
partitioning schemes."""
|
||||
|
||||
homepage = "http://glaros.dtc.umn.edu/gkhome/metis/metis/overview"
|
||||
base_url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis"
|
||||
url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz"
|
||||
list_url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/OLD"
|
||||
|
||||
version('5.1.0', '5465e67079419a69e0116de24fce58fe')
|
||||
version('5.0.2', 'acb521a4e8c2e6dd559a7f9abd0468c5')
|
||||
|
|
@ -55,12 +56,11 @@ class Metis(Package):
|
|||
patch('install_gklib_defs_rename.patch', when='@5:')
|
||||
|
||||
def url_for_version(self, version):
|
||||
verdir = 'OLD/' if version < Version('4.0.3') else ''
|
||||
return '%s/%smetis-%s.tar.gz' % (Metis.base_url, verdir, version)
|
||||
|
||||
@when('@:4')
|
||||
def patch(self):
|
||||
pass
|
||||
url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis"
|
||||
if version < Version('4.0.3'):
|
||||
url += "/OLD"
|
||||
url += "/metis-{0}.tar.gz".format(version)
|
||||
return url
|
||||
|
||||
@when('@5:')
|
||||
def patch(self):
|
||||
|
|
@ -84,7 +84,7 @@ def patch(self):
|
|||
filter_file('#define MAX_JBUFS 128', '#define MAX_JBUFS 24',
|
||||
join_path(source_path, 'GKlib', 'error.c'))
|
||||
|
||||
@when('@:4')
|
||||
@when('@:4') # noqa: F811
|
||||
def install(self, spec, prefix):
|
||||
# Process library spec and options
|
||||
if any('+{0}'.format(v) in spec for v in ['gdb', 'int64', 'real64']):
|
||||
|
|
@ -175,7 +175,7 @@ def install(self, spec, prefix):
|
|||
Executable(test_bin('mesh2dual'))(test_graph('metis.mesh'))
|
||||
"""
|
||||
|
||||
@when('@5:')
|
||||
@when('@5:') # noqa: F811
|
||||
def install(self, spec, prefix):
|
||||
source_directory = self.stage.source_path
|
||||
build_directory = join_path(source_directory, 'build')
|
||||
|
|
@ -187,7 +187,7 @@ def install(self, spec, prefix):
|
|||
if '+shared' in spec:
|
||||
options.append('-DSHARED:BOOL=ON')
|
||||
else:
|
||||
# Remove all RPATH options
|
||||
# Remove all RPATH options
|
||||
# (RPATHxxx options somehow trigger cmake to link dynamically)
|
||||
rpath_options = []
|
||||
for o in options:
|
||||
|
|
|
|||
|
|
@ -31,15 +31,32 @@ class Mfem(Package):
|
|||
homepage = 'http://www.mfem.org'
|
||||
url = 'https://github.com/mfem/mfem'
|
||||
|
||||
# mfem is downloaded from a URL shortener at request of upstream
|
||||
# author Tzanio Kolev <tzanio@llnl.gov>. See here:
|
||||
# https://github.com/mfem/mfem/issues/53
|
||||
#
|
||||
# The following procedure should be used to verify security when a
|
||||
# new verison is added:
|
||||
#
|
||||
# 1. Verify that no checksums on old versions have changed.
|
||||
#
|
||||
# 2. Verify that the shortened URL for the new version is listed at:
|
||||
# http://mfem.org/download/
|
||||
#
|
||||
# 3. Use http://getlinkinfo.com or similar to verify that the
|
||||
# underling download link for the latest version comes has the
|
||||
# prefix: http://mfem.github.io/releases
|
||||
#
|
||||
# If this quick verification procedure fails, additional discussion
|
||||
# will be required to verify the new version.
|
||||
|
||||
version('3.2',
|
||||
'2938c3deed4ec4f7fd5b5f5cfe656845282e86e2dcd477d292390058b7b94340',
|
||||
url='http://goo.gl/Y9T75B', preferred=True, extension='.tar.gz')
|
||||
url='http://goo.gl/Y9T75B', extension='.tar.gz')
|
||||
|
||||
version('3.1',
|
||||
'841ea5cf58de6fae4de0f553b0e01ebaab9cd9c67fa821e8a715666ecf18fc57',
|
||||
url='http://goo.gl/xrScXn', extension='.tar.gz')
|
||||
# version('3.1', git='https://github.com/mfem/mfem.git',
|
||||
# commit='dbae60fe32e071989b52efaaf59d7d0eb2a3b574')
|
||||
|
||||
variant('metis', default=False, description='Activate support for metis')
|
||||
variant('hypre', default=False, description='Activate support for hypre')
|
||||
|
|
|
|||
|
|
@ -30,13 +30,12 @@ class Mitos(Package):
|
|||
performance data to view with MemAxes"""
|
||||
|
||||
homepage = "https://github.com/llnl/Mitos"
|
||||
url = "https://github.com/llnl/Mitos"
|
||||
url = "https://github.com/LLNL/Mitos/archive/v0.9.1.tar.gz"
|
||||
|
||||
version('0.9.2',
|
||||
git='https://github.com/llnl/Mitos.git',
|
||||
commit='8cb143a2e8c00353ff531a781a9ca0992b0aaa3d')
|
||||
|
||||
version('0.9.1', git='https://github.com/llnl/Mitos.git', tag='v0.9.1')
|
||||
version('0.9.1', 'c6cb57f3cae54f5157affd97ef7ef79e')
|
||||
|
||||
depends_on('dyninst@8.2.1:')
|
||||
depends_on('hwloc')
|
||||
|
|
|
|||
|
|
@ -35,7 +35,7 @@ class Moab(Package):
|
|||
mesh in chunks rather than through individual entities, while also
|
||||
versatile enough to support individual entity access."""
|
||||
homepage = "https://bitbucket.org/fathomteam/moab"
|
||||
url = "http://ftp.mcs.anl.gov/pub/fathom/moab-4.6.3.tar.gz"
|
||||
url = "http://ftp.mcs.anl.gov/pub/fathom/moab-4.9.1.tar.gz"
|
||||
|
||||
version('4.9.1', '19cc2189fa266181ad9109b18d0b2ab8')
|
||||
version('4.9.0', '40695d0a159040683cfa05586ad4a7c2')
|
||||
|
|
|
|||
|
|
@ -41,9 +41,6 @@ class Mxml(AutotoolsPackage):
|
|||
version('2.6', '68977789ae64985dddbd1a1a1652642e')
|
||||
version('2.5', 'f706377fba630b39fa02fd63642b17e5')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return "https://github.com/michaelrsweet/mxml/releases/download/release-{0}/mxml-{0}.tar.gz".format(version)
|
||||
|
||||
# module swap PrgEnv-intel PrgEnv-$COMP
|
||||
# (Can use whatever compiler you want to use)
|
||||
# Case statement to change CC and CXX flags
|
||||
|
|
|
|||
|
|
@ -30,7 +30,7 @@ class Nettle(AutotoolsPackage):
|
|||
that is designed to fit easily in many contexts."""
|
||||
|
||||
homepage = "https://www.lysator.liu.se/~nisse/nettle/"
|
||||
url = "http://ftp.gnu.org/gnu/nettle/nettle-2.7.1.tar.gz"
|
||||
url = "http://ftp.gnu.org/gnu/nettle/nettle-3.2.tar.gz"
|
||||
|
||||
version('3.2', 'afb15b4764ebf1b4e6d06c62bd4d29e4')
|
||||
version('2.7.1', '003d5147911317931dd453520eb234a5')
|
||||
|
|
|
|||
|
|
@ -29,6 +29,7 @@ class Nextflow(Package):
|
|||
"""Data-driven computational pipelines"""
|
||||
|
||||
homepage = "http://www.nextflow.io"
|
||||
url = "https://github.com/nextflow-io/nextflow/releases/download/v0.24.1/nextflow"
|
||||
|
||||
version('0.24.1', '80ec8c4fe8e766e0bdd1371a50410d1d',
|
||||
expand=False)
|
||||
|
|
@ -39,10 +40,6 @@ class Nextflow(Package):
|
|||
|
||||
depends_on('jdk')
|
||||
|
||||
def url_for_version(self, version):
|
||||
base_url = 'https://github.com/nextflow-io/nextflow/releases/download/v{0}/nextflow'
|
||||
return base_url.format(version)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
mkdirp(prefix.bin)
|
||||
install("nextflow", join_path(prefix.bin, "nextflow"))
|
||||
|
|
|
|||
|
|
@ -32,6 +32,7 @@ class Oce(Package):
|
|||
Open CASCADE library.
|
||||
"""
|
||||
homepage = "https://github.com/tpaviot/oce"
|
||||
url = "https://github.com/tpaviot/oce/archive/OCE-0.18.tar.gz"
|
||||
|
||||
version('0.18', '226e45e77c16a4a6e127c71fefcd171410703960ae75c7ecc7eb68895446a993')
|
||||
version('0.17.2', 'bf2226be4cd192606af677cf178088e5')
|
||||
|
|
@ -46,10 +47,6 @@ class Oce(Package):
|
|||
depends_on('cmake@2.8:', type='build')
|
||||
depends_on('tbb', when='+tbb')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return 'https://github.com/tpaviot/oce/archive/OCE-%s.tar.gz' % (
|
||||
version.dotted)
|
||||
|
||||
# There is a bug in OCE which appears with Clang (version?) or GCC 6.0
|
||||
# and has to do with compiler optimization, see
|
||||
# https://github.com/tpaviot/oce/issues/576
|
||||
|
|
|
|||
|
|
@ -30,17 +30,11 @@ class Octopus(Package):
|
|||
theory code."""
|
||||
|
||||
homepage = "http://www.tddft.org/programs/octopus/"
|
||||
base_url = "http://www.tddft.org/programs/octopus/down.php?file="
|
||||
url = "http://www.tddft.org/programs/octopus/down.php?file=6.0/octopus-6.0.tar.gz"
|
||||
|
||||
version('6.0', '5d1168c2a8d7fd9cb9492eaebaa7182e')
|
||||
version('5.0.1', '2b6392ab67b843f9d4ca7413fc07e822')
|
||||
|
||||
# Sample url is:
|
||||
# "http://www.tddft.org/programs/octopus/down.php?file=5.0.1/octopus-5.0.1.tar.gz"
|
||||
def url_for_version(self, version):
|
||||
return '{0}/{1}/octopus-{1}.tar.gz'.format(Octopus.base_url,
|
||||
version.dotted)
|
||||
|
||||
variant('scalapack', default=False,
|
||||
description='Compile with Scalapack')
|
||||
variant('metis', default=True,
|
||||
|
|
|
|||
|
|
@ -43,7 +43,3 @@ class Openjpeg(CMakePackage):
|
|||
version('2.0', 'cdf266530fee8af87454f15feb619609')
|
||||
version('1.5.2', '545f98923430369a6b046ef3632ef95c')
|
||||
version('1.5.1', 'd774e4b5a0db5f0f171c4fc0aabfa14e')
|
||||
|
||||
def url_for_version(self, version):
|
||||
fmt = 'https://github.com/uclouvain/openjpeg/archive/version.{0}.tar.gz'
|
||||
return fmt.format(version.dotted)
|
||||
|
|
|
|||
|
|
@ -29,9 +29,9 @@
|
|||
class Panda(Package):
|
||||
"""PANDA: Parallel AdjaceNcy Decomposition Algorithm"""
|
||||
homepage = "http://comopt.ifi.uni-heidelberg.de/software/PANDA/index.html"
|
||||
url = "http://comopt.ifi.uni-heidelberg.de/software/PANDA/downloads/current_panda.tar"
|
||||
url = "http://comopt.ifi.uni-heidelberg.de/software/PANDA/downloads/panda-2016-03-07.tar"
|
||||
|
||||
version('current', 'b06dc312ee56e13eefea9c915b70fcef')
|
||||
version('2016-03-07', 'b06dc312ee56e13eefea9c915b70fcef')
|
||||
|
||||
# Note: Panda can also be built without MPI support
|
||||
|
||||
|
|
|
|||
|
|
@ -33,7 +33,8 @@ class Parmetis(Package):
|
|||
computing fill-reducing orderings of sparse matrices."""
|
||||
|
||||
homepage = 'http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview'
|
||||
base_url = 'http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis'
|
||||
url = 'http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/parmetis-4.0.3.tar.gz'
|
||||
list_url = 'http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/OLD'
|
||||
|
||||
version('4.0.3', 'f69c479586bf6bb7aff6a9bc0c739628')
|
||||
version('4.0.2', '0912a953da5bb9b5e5e10542298ffdce')
|
||||
|
|
@ -54,8 +55,11 @@ class Parmetis(Package):
|
|||
patch('pkg-parmetis-82409d68aa1d6cbc70740d0f35024aae17f7d5cb.patch')
|
||||
|
||||
def url_for_version(self, version):
|
||||
verdir = 'OLD/' if version < Version('3.2.0') else ''
|
||||
return '%s/%sparmetis-%s.tar.gz' % (Parmetis.base_url, verdir, version)
|
||||
url = 'http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis'
|
||||
if version < Version('3.2.0'):
|
||||
url += '/OLD'
|
||||
url += '/parmetis-{0}.tar.gz'.format(version)
|
||||
return url
|
||||
|
||||
def install(self, spec, prefix):
|
||||
source_directory = self.stage.source_path
|
||||
|
|
@ -72,7 +76,7 @@ def install(self, spec, prefix):
|
|||
if '+shared' in spec:
|
||||
options.append('-DSHARED:BOOL=ON')
|
||||
else:
|
||||
# Remove all RPATH options
|
||||
# Remove all RPATH options
|
||||
# (RPATHxxx options somehow trigger cmake to link dynamically)
|
||||
rpath_options = []
|
||||
for o in options:
|
||||
|
|
|
|||
|
|
@ -29,7 +29,7 @@ class Prank(Package):
|
|||
"""A powerful multiple sequence alignment browser."""
|
||||
|
||||
homepage = "http://wasabiapp.org/software/prank/"
|
||||
url = "http://wasabiapp.org/download/prank/prank.source.140603.tgz"
|
||||
url = "http://wasabiapp.org/download/prank/prank.source.150803.tgz"
|
||||
|
||||
version('150803', '71ac2659e91c385c96473712c0a23e8a')
|
||||
|
||||
|
|
|
|||
|
|
@ -30,10 +30,10 @@ class PyAutopep8(PythonPackage):
|
|||
PEP 8 style guide."""
|
||||
|
||||
homepage = "https://github.com/hhatto/autopep8"
|
||||
url = "https://github.com/hhatto/autopep8/archive/v1.2.4.tar.gz"
|
||||
url = "https://pypi.io/packages/source/a/autopep8/autopep8-1.2.4.tar.gz"
|
||||
|
||||
version('1.2.4', '0458db85159a9e1b45f3e71ce6c158da')
|
||||
version('1.2.2', 'def3d023fc9dfd1b7113602e965ad8e1')
|
||||
version('1.2.4', 'fcea19c0c5e505b425e2a78afb771f5c')
|
||||
version('1.2.2', '3d97f9c89d14a0975bffd32a2c61c36c')
|
||||
|
||||
extends('python', ignore='bin/pep8')
|
||||
depends_on('python@2.6:2.7,3.2:')
|
||||
|
|
@ -41,10 +41,3 @@ class PyAutopep8(PythonPackage):
|
|||
depends_on('py-pycodestyle@1.5.7:1.7.0', type=('build', 'run'))
|
||||
|
||||
depends_on('py-setuptools', type='build')
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "https://github.com/hhatto/autopep8/archive/{0}{1}.tar.gz"
|
||||
if version >= Version('1.2.3'):
|
||||
return url.format('v', version)
|
||||
else:
|
||||
return url.format('ver', version)
|
||||
|
|
|
|||
|
|
@ -30,10 +30,9 @@ class PyCdo(PythonPackage):
|
|||
Operators from Python."""
|
||||
|
||||
homepage = "https://pypi.python.org/pypi/cdo"
|
||||
url = "https://pypi.python.org/packages/sources/c/cdo/cdo-1.3.2.tar.gz"
|
||||
url = "https://pypi.io/packages/source/c/cdo/cdo-1.3.2.tar.gz"
|
||||
|
||||
version('1.3.2', '4b3686ec1b9b891f166c1c466c6db745',
|
||||
url="https://pypi.python.org/packages/d6/13/908e7c1451e1f5fb68405f341cdcb3196a16952ebfe1f172cb788f864aa9/cdo-1.3.2.tar.gz")
|
||||
version('1.3.2', '4b3686ec1b9b891f166c1c466c6db745')
|
||||
|
||||
depends_on('cdo')
|
||||
|
||||
|
|
|
|||
|
|
@ -50,7 +50,3 @@ class PyMarkdown(PythonPackage):
|
|||
|
||||
depends_on('py-setuptools', type='build')
|
||||
depends_on('python@2.7:2.8,3.2:3.4')
|
||||
|
||||
def url_for_version(self, version):
|
||||
base_url = "https://github.com/waylan/Python-Markdown/archive"
|
||||
return "{0}/{1}-final.tar.gz".format(base_url, version)
|
||||
|
|
|
|||
|
|
@ -32,9 +32,8 @@ class PyProj(PythonPackage):
|
|||
|
||||
# This is not a tagged release of pyproj.
|
||||
# The changes in this "version" fix some bugs, especially with Python3 use.
|
||||
version('1.9.5.1.1', 'd035e4bc704d136db79b43ab371b27d2',
|
||||
url='https://www.github.com/jswhit/pyproj/tarball/0be612cc9f972e38b50a90c946a9b353e2ab140f')
|
||||
|
||||
version('1.9.5.1.1', git='https://www.github.com/jswhit/pyproj.git',
|
||||
commit='0be612cc9f972e38b50a90c946a9b353e2ab140f')
|
||||
version('1.9.5.1', 'a4b80d7170fc82aee363d7f980279835')
|
||||
|
||||
depends_on('py-cython', type='build')
|
||||
|
|
|
|||
|
|
@ -38,6 +38,3 @@ class PyPypar(PythonPackage):
|
|||
depends_on('py-numpy', type=('build', 'run'))
|
||||
|
||||
build_directory = 'source'
|
||||
|
||||
def url_for_version(self, version):
|
||||
return "https://storage.googleapis.com/google-code-archive-downloads/v2/code.google.com/pypar/pypar-%s.tgz" % version
|
||||
|
|
|
|||
|
|
@ -28,22 +28,9 @@
|
|||
class PyRtree(PythonPackage):
|
||||
"""Python interface to the RTREE.4 Library."""
|
||||
homepage = "http://toblerity.org/rtree/"
|
||||
url = "https://github.com/Toblerity/rtree/tarball/0.8.2"
|
||||
url = "https://pypi.io/packages/source/R/Rtree/Rtree-0.8.3.tar.gz"
|
||||
|
||||
# Not an official release yet. But changes in here are required
|
||||
# to work with Spack. As it does with all packages, Spack
|
||||
# installs libspatialindex in a non-system location. Without the
|
||||
# changes in this fork, py-rtree requires an environment variables
|
||||
# to be set *at runtime*, in order to find libspatialindex. That
|
||||
# is not feasible within the Spack worldview.
|
||||
version('0.8.2.2', 'b1fe96a73153db49ea6ce45a063d82cb',
|
||||
url='https://github.com/citibeth/rtree/tarball/95a678cc7350857a1bb631bc41254efcd1fc0a0d')
|
||||
|
||||
version('0.8.2.1', '394696ca849dd9f3a5ef24fb02a41ef4',
|
||||
url='https://github.com/citibeth/rtree/tarball/3a87d86f66a3955676b2507d3bf424ade938a22b')
|
||||
|
||||
# Does not work with Spack
|
||||
# version('0.8.2', '593c7ac6babc397b8ba58f1636c1e0a0')
|
||||
version('0.8.3', 'a27cb05a85eed0a3605c45ebccc432f8')
|
||||
|
||||
depends_on('py-setuptools', type='build')
|
||||
depends_on('libspatialindex')
|
||||
|
|
|
|||
|
|
@ -29,7 +29,7 @@ class RLava(RPackage):
|
|||
"""Estimation and simulation of latent variable models."""
|
||||
|
||||
homepage = "https://cran.r-project.org/package=lava"
|
||||
url = "https://cran.r-project.org/src/contrib/lava_1.4.6.tar.gz"
|
||||
url = "https://cran.r-project.org/src/contrib/lava_1.4.7.tar.gz"
|
||||
list_url = "https://cran.r-project.org/src/contrib/Archive/lava"
|
||||
|
||||
version('1.4.7', '28039248a7039ba9281d172e4dbf9543')
|
||||
|
|
|
|||
|
|
@ -30,7 +30,7 @@
|
|||
class Root(Package):
|
||||
"""ROOT is a data analysis framework."""
|
||||
homepage = "https://root.cern.ch"
|
||||
url = "https://root.cern.ch/download/root_v6.07.02.source.tar.gz"
|
||||
url = "https://root.cern.ch/download/root_v6.06.06.source.tar.gz"
|
||||
|
||||
version('6.06.06', '4308449892210c8d36e36924261fea26')
|
||||
version('6.06.04', '55a2f98dd4cea79c9c4e32407c2d6d17')
|
||||
|
|
@ -83,7 +83,3 @@ def setup_dependent_environment(self, spack_env, run_env, dependent_spec):
|
|||
spack_env.set('ROOTSYS', self.prefix)
|
||||
spack_env.set('ROOT_VERSION', 'v6')
|
||||
spack_env.prepend_path('PYTHONPATH', self.prefix.lib)
|
||||
|
||||
def url_for_version(self, version):
|
||||
"""Handle ROOT's unusual version string."""
|
||||
return "https://root.cern.ch/download/root_v%s.source.tar.gz" % version
|
||||
|
|
|
|||
|
|
@ -35,10 +35,11 @@ class Rose(Package):
|
|||
(Developed at Lawrence Livermore National Lab)"""
|
||||
|
||||
homepage = "http://rosecompiler.org/"
|
||||
url = "https://github.com/rose-compiler/edg4x-rose"
|
||||
url = "https://github.com/rose-compiler/rose/archive/v0.9.7.tar.gz"
|
||||
|
||||
version('0.9.7', 'e14ce5250078df4b09f4f40559d46c75')
|
||||
version('master', branch='master',
|
||||
git='https://github.com/rose-compiler/edg4x-rose.git')
|
||||
git='https://github.com/rose-compiler/rose.git')
|
||||
|
||||
patch('add_spack_compiler_recognition.patch')
|
||||
|
||||
|
|
@ -46,7 +47,7 @@ class Rose(Package):
|
|||
depends_on("automake@1.14", type='build')
|
||||
depends_on("libtool@2.4", type='build')
|
||||
depends_on("boost@1.54.0")
|
||||
depends_on("jdk@8u25-linux-x64")
|
||||
depends_on("jdk@8u25")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# Bootstrap with autotools
|
||||
|
|
|
|||
|
|
@ -29,9 +29,9 @@
|
|||
class RustBindgen(Package):
|
||||
"""The rust programming language toolchain"""
|
||||
homepage = "http://www.rust-lang.org"
|
||||
url = "https://github.com/crabtw/rust-bindgen"
|
||||
url = "https://github.com/servo/rust-bindgen/archive/v0.20.5.tar.gz"
|
||||
|
||||
version('0.16', tag='0.16', git='https://github.com/crabtw/rust-bindgen')
|
||||
version('0.20.5', '3e4d70a5bec540324fdd95bc9e82bebc')
|
||||
|
||||
extends("rust")
|
||||
depends_on("llvm")
|
||||
|
|
|
|||
|
|
@ -32,14 +32,11 @@ class Scorep(Package):
|
|||
"""
|
||||
|
||||
homepage = "http://www.vi-hps.org/projects/score-p"
|
||||
url = "http://www.vi-hps.org/upload/packages/scorep/scorep-1.2.3.tar.gz"
|
||||
url = "http://www.vi-hps.org/upload/packages/scorep/scorep-2.0.2.tar.gz"
|
||||
|
||||
version('2.0.2', '8f00e79e1b5b96e511c5ebecd10b2888',
|
||||
url='http://www.vi-hps.org/upload/packages/scorep/scorep-2.0.2.tar.gz')
|
||||
version('1.4.2', '3b9a042b13bdd5836452354e6567f71e',
|
||||
url='http://www.vi-hps.org/upload/packages/scorep/scorep-1.4.2.tar.gz')
|
||||
version('1.3', '9db6f957b7f51fa01377a9537867a55c',
|
||||
url='http://www.vi-hps.org/upload/packages/scorep/scorep-1.3.tar.gz')
|
||||
version('2.0.2', '8f00e79e1b5b96e511c5ebecd10b2888')
|
||||
version('1.4.2', '3b9a042b13bdd5836452354e6567f71e')
|
||||
version('1.3', '9db6f957b7f51fa01377a9537867a55c')
|
||||
|
||||
##########
|
||||
# Dependencies for SCORE-P are quite tight. See the homepage for more
|
||||
|
|
|
|||
|
|
@ -31,8 +31,7 @@ class Scotch(Package):
|
|||
partitioning, graph clustering, and sparse matrix ordering."""
|
||||
|
||||
homepage = "http://www.labri.fr/perso/pelegrin/scotch/"
|
||||
url = "http://gforge.inria.fr/frs/download.php/latestfile/298/scotch_6.0.3.tar.gz" # noqa: E501
|
||||
base_url = "http://gforge.inria.fr/frs/download.php/latestfile/298"
|
||||
url = "http://gforge.inria.fr/frs/download.php/latestfile/298/scotch_6.0.4.tar.gz"
|
||||
list_url = "http://gforge.inria.fr/frs/?group_id=248"
|
||||
|
||||
version('6.0.4', 'd58b825eb95e1db77efe8c6ff42d329f')
|
||||
|
|
@ -71,12 +70,10 @@ class Scotch(Package):
|
|||
# from the Scotch hosting site. These alternative archives include a
|
||||
# superset of the behavior in their default counterparts, so we choose to
|
||||
# always grab these versions for older Scotch versions for simplicity.
|
||||
def url_for_version(self, version):
|
||||
return super(Scotch, self).url_for_version(version)
|
||||
|
||||
@when('@:6.0.0')
|
||||
def url_for_version(self, version):
|
||||
return '%s/scotch_%s_esmumps.tar.gz' % (Scotch.base_url, version)
|
||||
url = "http://gforge.inria.fr/frs/download.php/latestfile/298/scotch_{0}_esmumps.tar.gz"
|
||||
return url.format(version)
|
||||
|
||||
def patch(self):
|
||||
self.configure()
|
||||
|
|
|
|||
|
|
@ -30,7 +30,7 @@ class Silo(Package):
|
|||
data to binary, disk files."""
|
||||
|
||||
homepage = "http://wci.llnl.gov/simulation/computer-codes/silo"
|
||||
base_url = "https://wci.llnl.gov/content/assets/docs/simulation/computer-codes/silo"
|
||||
url = "https://wci.llnl.gov/content/assets/docs/simulation/computer-codes/silo/silo-4.10.2/silo-4.10.2.tar.gz"
|
||||
|
||||
version('4.10.2', '9ceac777a2f2469ac8cef40f4fab49c8')
|
||||
version('4.9', 'a83eda4f06761a86726e918fc55e782a')
|
||||
|
|
@ -67,6 +67,3 @@ def install(self, spec, prefix):
|
|||
|
||||
make()
|
||||
make('install')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return '%s/silo-%s/silo-%s.tar.gz' % (Silo.base_url, version, version)
|
||||
|
|
|
|||
|
|
@ -31,6 +31,7 @@ class StarCcmPlus(Package):
|
|||
"""STAR-CCM+ (Computational Continuum Mechanics) CFD solver."""
|
||||
|
||||
homepage = "http://mdx.plm.automation.siemens.com/star-ccm-plus"
|
||||
url = "file://{0}/STAR-CCM+11.06.010_02_linux-x86_64.tar.gz".format(os.getcwd())
|
||||
|
||||
version('11.06.010_02', 'd349c6ac8293d8e6e7a53533d695588f')
|
||||
|
||||
|
|
@ -40,10 +41,6 @@ class StarCcmPlus(Package):
|
|||
license_required = True
|
||||
license_vars = ['CDLMD_LICENSE_FILE', 'LM_LICENSE_FILE']
|
||||
|
||||
def url_for_version(self, version):
|
||||
return "file://{0}/STAR-CCM+{1}_linux-x86_64.tar.gz".format(
|
||||
os.getcwd(), version)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# There is a known issue with the LaunchAnywhere application.
|
||||
# Specifically, it cannot handle long prompts or prompts
|
||||
|
|
|
|||
|
|
@ -33,8 +33,8 @@ class SublimeText(Package):
|
|||
homepage = "http://www.sublimetext.com/"
|
||||
url = "https://download.sublimetext.com/sublime_text_3_build_3126_x64.tar.bz2"
|
||||
|
||||
version('3126', 'acc34252b0ea7dff1f581c5db1564dcb')
|
||||
version('2.0.2', '699cd26d7fe0bada29eb1b2cd7b50e4b')
|
||||
version('3_build_3126', 'acc34252b0ea7dff1f581c5db1564dcb')
|
||||
version('2.0.2', '699cd26d7fe0bada29eb1b2cd7b50e4b')
|
||||
|
||||
# Sublime text comes as a pre-compiled binary.
|
||||
# Since we can't link to Spack packages, we'll just have to
|
||||
|
|
|
|||
|
|
@ -34,6 +34,7 @@ class Tcl(AutotoolsPackage):
|
|||
that is truly cross platform, easily deployed and highly
|
||||
extensible."""
|
||||
homepage = "http://www.tcl.tk"
|
||||
url = "http://prdownloads.sourceforge.net/tcl/tcl8.6.5-src.tar.gz"
|
||||
|
||||
version('8.6.6', '5193aea8107839a79df8ac709552ecb7')
|
||||
version('8.6.5', '0e6426a4ca9401825fbc6ecf3d89a326')
|
||||
|
|
@ -45,10 +46,6 @@ class Tcl(AutotoolsPackage):
|
|||
|
||||
configure_directory = 'unix'
|
||||
|
||||
def url_for_version(self, version):
|
||||
base_url = 'http://prdownloads.sourceforge.net/tcl'
|
||||
return '{0}/tcl{1}-src.tar.gz'.format(base_url, version)
|
||||
|
||||
def setup_environment(self, spack_env, run_env):
|
||||
# When using Tkinter from within spack provided python+tk, python
|
||||
# will not be able to find Tcl/Tk unless TCL_LIBRARY is set.
|
||||
|
|
|
|||
|
|
@ -34,7 +34,7 @@ class Tetgen(Package):
|
|||
boundary conforming Delaunay meshes, and Voronoi paritions.
|
||||
"""
|
||||
|
||||
homepage = "http://www.tetgen.org"
|
||||
homepage = "http://wias-berlin.de/software/tetgen/"
|
||||
|
||||
version('1.5.0', '3b9fd9cdec121e52527b0308f7aad5c1', url='http://www.tetgen.org/1.5/src/tetgen1.5.0.tar.gz')
|
||||
version('1.4.3', 'd6a4bcdde2ac804f7ec66c29dcb63c18', url='http://www.tetgen.org/files/tetgen1.4.3.tar.gz')
|
||||
|
|
|
|||
|
|
@ -34,6 +34,10 @@ class Tinyxml(CMakePackage):
|
|||
|
||||
version('2.6.2', 'cba3f50dd657cb1434674a03b21394df9913d764')
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "https://sourceforge.net/projects/tinyxml/files/tinyxml/{0}/tinyxml_{1}.tar.gz"
|
||||
return url.format(version.dotted, version.underscored)
|
||||
|
||||
def patch(self):
|
||||
copyfile(join_path(os.path.dirname(__file__),
|
||||
"CMakeLists.txt"), "CMakeLists.txt")
|
||||
|
|
|
|||
|
|
@ -33,6 +33,7 @@ class Tk(AutotoolsPackage):
|
|||
applications that run unchanged across Windows, Mac OS X, Linux
|
||||
and more."""
|
||||
homepage = "http://www.tcl.tk"
|
||||
url = "http://prdownloads.sourceforge.net/tcl/tk8.6.5-src.tar.gz"
|
||||
|
||||
version('8.6.6', 'dd7dbb3a6523c42d05f6ab6e86096e99')
|
||||
version('8.6.5', '11dbbd425c3e0201f20d6a51482ce6c4')
|
||||
|
|
@ -43,10 +44,6 @@ class Tk(AutotoolsPackage):
|
|||
|
||||
configure_directory = 'unix'
|
||||
|
||||
def url_for_version(self, version):
|
||||
base_url = "http://prdownloads.sourceforge.net/tcl"
|
||||
return "{0}/tk{1}-src.tar.gz".format(base_url, version)
|
||||
|
||||
def setup_environment(self, spack_env, run_env):
|
||||
# When using Tkinter from within spack provided python+tk, python
|
||||
# will not be able to find Tcl/Tk unless TK_LIBRARY is set.
|
||||
|
|
|
|||
|
|
@ -44,7 +44,7 @@ class Trilinos(CMakePackage):
|
|||
A unique design feature of Trilinos is its focus on packages.
|
||||
"""
|
||||
homepage = "https://trilinos.org/"
|
||||
base_url = "https://github.com/trilinos/Trilinos/archive"
|
||||
url = "https://github.com/trilinos/Trilinos/archive/trilinos-release-12-10-1.tar.gz"
|
||||
|
||||
version('develop',
|
||||
git='https://github.com/trilinos/Trilinos.git', tag='develop')
|
||||
|
|
@ -63,10 +63,6 @@ class Trilinos(CMakePackage):
|
|||
version('11.14.2', 'e7c3cdbbfe3279a8a68838b873ad6d51')
|
||||
version('11.14.1', 'b7760b142eef66c79ed13de7c9560f81')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return '%s/trilinos-release-%s.tar.gz' % \
|
||||
(Trilinos.base_url, version.dashed)
|
||||
|
||||
variant('xsdkflags', default=False,
|
||||
description='Compile using the default xSDK configuration')
|
||||
variant('metis', default=True,
|
||||
|
|
@ -125,6 +121,10 @@ def url_for_version(self, version):
|
|||
|
||||
patch('umfpack_from_suitesparse.patch', when='@:12.8.1')
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "https://github.com/trilinos/Trilinos/archive/trilinos-release-{0}.tar.gz"
|
||||
return url.format(version.dashed)
|
||||
|
||||
# check that the combination of variants makes sense
|
||||
def variants_check(self):
|
||||
if '+superlu-dist' in self.spec and self.spec.satisfies('@:11.4.3'):
|
||||
|
|
|
|||
|
|
@ -34,7 +34,7 @@ class Unison(Package):
|
|||
other."""
|
||||
|
||||
homepage = "https://www.cis.upenn.edu/~bcpierce/unison/"
|
||||
url = "https://www.seas.upenn.edu/~bcpierce/unison//download/releases/stable/unison-2.48.3.tar.gz"
|
||||
url = "https://www.seas.upenn.edu/~bcpierce/unison//download/releases/stable/unison-2.48.4.tar.gz"
|
||||
|
||||
version('2.48.4', '5334b78c7e68169df7de95f4c6c4b60f')
|
||||
|
||||
|
|
|
|||
|
|
@ -31,19 +31,10 @@ class Voropp(MakefilePackage):
|
|||
scientific fields."""
|
||||
|
||||
homepage = "http://math.lbl.gov/voro++/about.html"
|
||||
|
||||
# This url is wrong but it passes the test the ++ make the url parser fail,
|
||||
# the correct url is constructed by url_for_version that has to be used in
|
||||
# any case due to the difference between the package name and the url
|
||||
url = "http://math.lbl.gov/voropp/download/dir/voropp-0.4.6.tar.gz"
|
||||
url = "http://math.lbl.gov/voro++/download/dir/voro++-0.4.6.tar.gz"
|
||||
|
||||
version('0.4.6', '2338b824c3b7b25590e18e8df5d68af9')
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "http://math.lbl.gov/voro++/download/dir/voro++-{0}.tar.gz".format( # noqa: E501
|
||||
str(version))
|
||||
return url
|
||||
|
||||
def edit(self, spec, prefix):
|
||||
filter_file(r'CC=g\+\+',
|
||||
'CC={0}'.format(self.compiler.cxx),
|
||||
|
|
|
|||
|
|
@ -33,6 +33,7 @@ class Vtk(CMakePackage):
|
|||
|
||||
homepage = "http://www.vtk.org"
|
||||
url = "http://www.vtk.org/files/release/7.1/VTK-7.1.0.tar.gz"
|
||||
list_url = "http://www.vtk.org/download/"
|
||||
|
||||
version('7.1.0', 'a7e814c1db503d896af72458c2d0228f')
|
||||
version('7.0.0', '5fe35312db5fb2341139b8e4955c367d')
|
||||
|
|
|
|||
|
|
@ -32,16 +32,12 @@ class Xsdktrilinos(CMakePackage):
|
|||
Trilinos.
|
||||
"""
|
||||
homepage = "https://trilinos.org/"
|
||||
base_url = "https://github.com/trilinos/xSDKTrilinos/archive"
|
||||
url = "https://github.com/trilinos/xSDKTrilinos/archive/trilinos-release-12-8-1.tar.gz"
|
||||
|
||||
version('develop', git='https://github.com/trilinos/xSDKTrilinos.git', tag='master')
|
||||
version('12.8.1', '9cc338ded17d1e10ea6c0dc18b22dcd4')
|
||||
version('12.6.4', '44c4c54ccbac73bb8939f68797b9454a')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return '%s/trilinos-release-%s.tar.gz' % \
|
||||
(Xsdktrilinos.base_url, version.dashed)
|
||||
|
||||
variant('hypre', default=True,
|
||||
description='Compile with Hypre preconditioner')
|
||||
variant('petsc', default=True,
|
||||
|
|
@ -59,6 +55,10 @@ def url_for_version(self, version):
|
|||
depends_on('trilinos@12.8.1', when='@12.8.1')
|
||||
depends_on('trilinos@develop', when='@develop')
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "https://github.com/trilinos/xSDKTrilinos/archive/trilinos-release-{0}.tar.gz"
|
||||
return url.format(version.dashed)
|
||||
|
||||
def cmake_args(self):
|
||||
spec = self.spec
|
||||
|
||||
|
|
|
|||
|
|
@ -31,7 +31,7 @@
|
|||
class Yorick(Package):
|
||||
"""Yorick is an interpreted programming language for scientific simulations
|
||||
or calculations, postprocessing or steering large simulation codes,
|
||||
interactive scientific graphics, and reading, writing, or translating
|
||||
interactive scientific graphics, and reading, writing, or translating
|
||||
files of numbers. Yorick includes an interactive graphics package, and a
|
||||
binary file package capable of translating to and from the raw numeric
|
||||
formats of all modern computers. Yorick is written in ANSI C and runs on
|
||||
|
|
@ -39,9 +39,9 @@ class Yorick(Package):
|
|||
"""
|
||||
|
||||
homepage = "http://dhmunro.github.io/yorick-doc/"
|
||||
url = "https://github.com/dhmunro/yorick/archive/y_2_2_04.tar.gz"
|
||||
url = "https://github.com/dhmunro/yorick/archive/y_2_2_04.tar.gz"
|
||||
|
||||
version('2.2.04', md5='1b5b0da6ad81b2d9dba64d991ec17939')
|
||||
version('2.2.04', '1b5b0da6ad81b2d9dba64d991ec17939')
|
||||
version('master', branch='master',
|
||||
git='https://github.com/dhmunro/yorick.git')
|
||||
version('f90-plugin', branch='f90-plugin',
|
||||
|
|
@ -51,6 +51,10 @@ class Yorick(Package):
|
|||
|
||||
depends_on('libx11', when='+X')
|
||||
|
||||
def url_for_version(self, version):
|
||||
url = "https://github.com/dhmunro/yorick/archive/y_{0}.tar.gz"
|
||||
return url.format(version.underscored)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
os.environ['FORTRAN_LINKAGE'] = '-Df_linkage'
|
||||
|
||||
|
|
|
|||
|
|
@ -41,7 +41,7 @@ class Zoltan(Package):
|
|||
"""
|
||||
|
||||
homepage = "http://www.cs.sandia.gov/zoltan"
|
||||
base_url = "http://www.cs.sandia.gov/~kddevin/Zoltan_Distributions"
|
||||
url = "http://www.cs.sandia.gov/~kddevin/Zoltan_Distributions/zoltan_distrib_v3.83.tar.gz"
|
||||
|
||||
version('3.83', '1ff1bc93f91e12f2c533ddb01f2c095f')
|
||||
version('3.8', '9d8fba8a990896881b85351d4327c4a9')
|
||||
|
|
@ -56,9 +56,6 @@ class Zoltan(Package):
|
|||
|
||||
depends_on('mpi', when='+mpi')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return '%s/zoltan_distrib_v%s.tar.gz' % (Zoltan.base_url, version)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# FIXME: The older Zoltan versions fail to compile the F90 MPI wrappers
|
||||
# because of some complicated generic type problem.
|
||||
|
|
|
|||
Loading…
Reference in a new issue