Commit graph

30208 commits

Author SHA1 Message Date
Erik Schnetter
eb80f4d9af
simulationio: New version 9.0.3 (#36465)
* simulationio: New version 9.0.3
* simulationio: Require swig @3
2023-03-28 10:09:13 -07:00
Gerhard Theurich
9160e78729
Add ESMF v8.4.1, and number of other changes to improve ESMF integration with Spack (#35980)
* Add v8.4.1, and a few other changes.
    Minor adjustments for better alignment between Spack and ESMF native
    build. For ESMF >= 8.3.1 now Spack defaults to using
    external-parallelio. Before use internal version, which was PIO-1 all
    the way up to v8.3.0b10 anyway! Xerces is disabled by default.
* Deal with two long lines flagged by prechecks/style.
* Try to satisfy prechecks/style.
* Try to satisfy flake8 rules wrt indentation of continuation lines.
* Now trying to satisfy "black reformatting".
* For "black" formatting really put that ugly comma at the end before
closing parentheses. Interesting.
* Support building against external-parallelio even w/o mpi, but select the
   external-parallelio dependency accordingly.
* Correct C compiler setting.
* Handle `pnetcdf` variant consistent with how `ParallelIO` does it. And
  also pass the `pnetcdf` variant down to the `external-parallelio`
  dependency if set.
* Long line formatting again.
* Simplify handling of tarball URL construction and update sha256
  checksums.
* Align version check with recommended self.spec.satisfies().
* Deprecate v8.4.0 which has a bug that can cause memory corruption, fixed
  in v8.4.1.
* Use double quotes vs single quotes as per style-check... although
  https://spack-tutorial.readthedocs.io/en/latest/tutorial_packaging.html#querying-spec-versions
  clearly shows it with single quotes.
2023-03-28 09:33:49 -07:00
Eric Brugger
0d829b632f
VisIt: Update to VisIt 3.3.1. (#36464) 2023-03-28 10:08:03 -04:00
eugeneswalker
c88b30b426
e4s power ci: ecp-data-vis-sdk: disable visit due to build issues (#36475) 2023-03-28 06:02:47 -04:00
Harmen Stoppels
d862edcce0
macos: set new ad-hoc signature with codesign after binary string replacement (#35585) 2023-03-28 00:33:35 -04:00
Erik Heeren
3b497359b7
ISPC: unblock 1.17-1.19 (#36346)
* ispc: attempts at getting more recent versions to work
* ispc: more attempts to get newer versions to build
* ispc: cleanup
* llvm: remove ispc_patches variant again
* ispc: unpin ncurses
* ispc: satisfy style checks
* ispc: 1.19 is only compatible with LLVM 13-15 
  otherwise it would not build against develop, as this now has LLVM 16
* ispc: relax LLVM version to what ispc requires itself
  verified that it builds against LLVM 13, 14, 15, but not 12 and 16
* ispc: use spec.satisfies instead of version comparison
  according to suggestions from review and docs, this is the canonical way to do it
* ispc: checksum 1.18.1
  just in order to include all versions, also checked that it builds

---------

Co-authored-by: Martin Aumüller <aumuell@reserv.at>
2023-03-27 11:30:36 -07:00
G-Ragghianti
4c599980da
Package heffte: Enable smoke test to find MPI launcher (#35724)
* Enable smoke test to find MPI launcher
* Adding self as maintainer
* Style fix
* Update var/spack/repos/builtin/packages/heffte/package.py

---------

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-03-27 11:26:56 -07:00
Ashwin Kumar Karnad
7266cc9b92
octopus: Update compiler flags (#36446)
* octopus: set the right compiler flags
  https://github.com/fangohr/octopus-in-spack/pull/70
* octopus: fix pep8 style issue
2023-03-27 11:13:28 -07:00
Annop Wongwathanarat
cc4a528274
sw4lite: add linking with libarmflang (#36461) 2023-03-27 11:08:53 -07:00
Shihab Shahriar Khan
efbfe38f63
arborx: make explicit the need to specify cuda_arch when +cuda (#36450) 2023-03-27 10:49:17 -07:00
Harmen Stoppels
5072e48dab
Add llnl.util.filesystem.find_first (#36083)
Add a `find_first` method that locates one instance of a file
that matches a specified pattern by recursively searching a directory
tree. Unlike other `find` methods, this only locates one file at most,
so can use optimizations that avoid searching the entire tree:
Typically the relevant files are at low depth, so it makes sense to
locate files through iterative deepening and early exit.
2023-03-27 09:42:16 -07:00
Satish Balay
c5b3fc6929
py-mpi4py: always force rebuild cython sources (#36460) 2023-03-27 10:05:31 -05:00
kaanolgu
deca4ce107
Babelstream Spack Package (#36164) 2023-03-27 17:04:28 +02:00
Jose E. Roman
e612436e26
New patch release SLEPc 3.18.3 (#36401)
Thanks-To: Satish Balay
2023-03-27 09:47:18 -05:00
Wouter Deconinck
fd19759783
xrootd: update patch (#36350)
Due to case change, a patch in xrootd doesn't apply cleanly. This fixes the patch by turning it into a `filter_file` with a more limited regex match.
2023-03-27 11:36:24 +02:00
Paul R. C. Kent
3265215f1d
py-pyscf: add v2.2.0,2.1.1,2.1.0 libcint: add v5.2.0 (#35497)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-27 11:34:17 +02:00
Auriane R
428e5726c1
Rename p2300 variant with stdexec (#36322) 2023-03-27 11:24:25 +02:00
dependabot[bot]
e0570c819c
build(deps): bump actions/checkout from 3.4.0 to 3.5.0 (#36418)
Bumps [actions/checkout](https://github.com/actions/checkout) from 3.4.0 to 3.5.0.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](24cb908017...8f4b7f8486)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-03-27 09:16:07 +00:00
Xavier Delaruelle
ea60220a84
modules: enhance help message (#36410)
Update tcl and lmod modulefile template to provide more information on
help message (name, version and target) like done on whatis for lmod
modulefiles.
2023-03-27 10:48:25 +02:00
Dennis Klein
84d67190a6
fairlogger: new versions, deprecations and various other updates (#36405) 2023-03-27 10:46:15 +02:00
Alec Scott
80a34ae9cc
perl-moose: add v2.2203 (#36368) 2023-03-27 10:42:39 +02:00
Tamara Dahlgren
7beb57cb05
Bugfix: add perl-data-optlist 0.113 dependency (#36411) 2023-03-27 10:42:15 +02:00
Wouter Deconinck
055c30acfb
root: new version 6.28.02 (#36419)
Only bugfixes: https://root.cern/doc/v628/release-notes.html#release-6.2802.

Builds fine on my test system:
```
[+] /opt/software/linux-ubuntu23.04-skylake/gcc-12.2.0/root-6.28.02-zwzhoz6d4323lggrqi66y6prg4hlzwie
```
2023-03-27 10:34:00 +02:00
Alec Scott
3cd61b9b83
libslirp: add v4.7.0 (#36423) 2023-03-27 10:33:25 +02:00
Alec Scott
6e8f449882
perl-exporter-tiny: add v1.006001 (#36424) 2023-03-27 10:33:07 +02:00
Alec Scott
51b0023638
perl-params-validate: add v1.31 (#36425) 2023-03-27 10:32:51 +02:00
Alec Scott
f02c374181
perl-time-hires: add v1.9758 (#36426) 2023-03-27 10:32:36 +02:00
Alec Scott
ff3245382e
perl-time-piece: add v1.3401 (#36427) 2023-03-27 10:32:20 +02:00
Wouter Deconinck
ebc492f1e8
Xorg docs: new versions (#36455) 2023-03-27 04:22:34 -04:00
Alec Scott
5b8f005962
perl-try-tiny: add v0.31 (#36428) 2023-03-27 10:05:54 +02:00
Alec Scott
b11febbbc9
perl-uri: add v5.08 (#36429) 2023-03-27 10:05:35 +02:00
Alec Scott
5837d4c587
perl-xml-parser-lite: add v0.722 (#36430) 2023-03-27 10:04:15 +02:00
Alec Scott
e5ea7b6e32
perl-xml-parser: add v2.46 (#36431) 2023-03-27 10:04:00 +02:00
Alec Scott
c69a1af5c7
perl-xml-simple: add v2.25 (#36432) 2023-03-27 10:03:44 +02:00
Alec Scott
b40f9f72ed
perl-xml-writer: add v0.900 (#36433) 2023-03-27 10:03:30 +02:00
Alec Scott
ab3fd38eda
perl-yaml-libyaml: add v0.84 (#36434) 2023-03-27 10:03:10 +02:00
Alec Scott
5b9b8902ac
perl-yaml-tiny: add v1.74 (#36435) 2023-03-27 10:02:52 +02:00
Alec Scott
8671f32b14
perl-yaml: add v1.30 (#36436) 2023-03-27 10:02:33 +02:00
Alec Scott
24f41ad050
postgresql: add v15.2 (#36438) 2023-03-27 10:02:17 +02:00
Alec Scott
732153c9e2
pstreams: add v1.0.3 (#36440) 2023-03-27 09:57:26 +02:00
Adam J. Stewart
227d19ef02
py-pytest-cov: add v4.0.0 (#36447) 2023-03-27 09:56:50 +02:00
Alec Scott
7600422183
presentproto: add v1.1 (#36439) 2023-03-27 09:51:52 +02:00
Wouter Deconinck
c2b4f5bf45
libpthread-stubs: adapt to XorgPackage (#36453)
This resolves a loose end from #36241 (missed due to package name). `libpthread-stubs` is another package from the xcb project that is now tracked through https://gitlab.freedesktop.org/xorg/ instead. No new versions; no changed hashes.
2023-03-27 09:48:55 +02:00
Satish Balay
56d98c3f0a
petsc, py-petsc4py: add v3.18.4, v3.18.5 (#36406)
* py-petsc4py: update ldshared-dev.patch [to work with current @main]

* petsc4py: always force rebuild cython sources
2023-03-27 09:44:43 +02:00
Axel Huebl
37fadd9b2f
openPMD-api: 0.15.0 (#36452) 2023-03-27 09:42:09 +02:00
AMD Toolchain Support
72318ba364
LAMMPS: Add Intel Package Support for AOCC 4.0 (#36155)
Add AOCC support for LAMMPS INTEL Package

Co-authored-by: Tooley, Phil <phil.tooley@amd.com>
Co-authored-by: usivakum <Umashankar.Sivakumar@amd.com>
2023-03-27 09:23:03 +02:00
Wouter Deconinck
32416eedd8
lhapdf: new version 6.5.4 (#36451) 2023-03-27 09:14:50 +02:00
Wouter Deconinck
417a5e4c3e
sherpa: new bugfix version 2.2.15 (#36420)
Minor bugfix only, https://gitlab.com/sherpa-team/sherpa/-/compare/v2.2.14...v2.2.15
2023-03-27 09:14:23 +02:00
Wouter Deconinck
85f1eb4534
py-versioneer: new versions, depends_on py-tomli (#36415) 2023-03-26 08:55:24 -05:00
Alec Scott
39100c5336
gobject-introspection: add v1.72.1 (#36422) 2023-03-26 13:02:42 +02:00