Fixes#8343#4154#7370Closes#4155
All but one of the backports packages were using "pkgutil-style"
namespacing, but configparser was using "pkg_resource-style".
A namespace needs to be one style or another. This adds a new
configparser version which switches to using the pkgutil-style
namespace approach.
With this update, one can now install flake8 with Spack and use
it by loading modules.
Debug output now includes the output of modulecmd executions. Only
output module content when a failure occurs; always report when a
module is loaded/unloaded.
The PREFIX variable in the makefiles is directly used to construct the
install name on the library metadata on darwin. If not passed, the
default /usr/local is used and the resulting librhash.dylib contains
usage informaiton of /usr/local/lib/librhash.0.dylib. This adds the
PREFIX= variable directly to the make command so the resulting usage
metadata contains the correct valid library path.
* flux-core: add v0.11.0 and updated dependencies
libuuid hasn't been a direct dependency of flux-core since 2015 (well
before any of the versions listed in the package).
The yaml-cpp dependency moved to flux-sched when we moved the jobpsec
library from core to sched.
Some python3 incompatibilities were found in 0.11.0, so bump the python3
support back a version.
* flux-sched: add v0.7.0 and make boost dependency more precise
* llvm: Bump version to 7.0.1
* llvm: Added perl-data-dumper build dependency for openmp
* llvm: Enable exception handling and RTTI
Useful to have turned on in general with RTTI but also necessary
to workaround some lldb stability issues with some versions of
libstdc++.
* Update the PMIx package
- Add latest releases to the list.
- Add dependency on hwloc for versions >= 3.0
- Flag preferred versions for libevent and hwloc
- Improve the description
- Point the project URL to the correct site
Signed-off-by: Ralph Castain <rhc@pmix.org>
* Only install the hwloc dependency for versions >= 3.0.0
Thanks to @ax3l for the suggestion
Signed-off-by: Ralph Castain <rhc@pmix.org>
* Add myself as a listed maintainer
Signed-off-by: Ralph Castain <rhc@pmix.org>
* Add warnings for existing conflicts. New versions of QMCPACK require a compiler with C++14 support.
* QMCPACK now requires a newer release of CMake.
* Switch QMCPACK to using FFTW-api provider.
* Relax dependencies on QMCPACK +da variant.
* Add QMCPACK 3.6.0 release.
* QMCPACK compiler-CUDA conflicts.
* QMCPACK fix typo in expressing conflict.
* Conditional needed since these variables are only used when FFTW is a dependency to QMCPACK.
* QMCPACK QE variant dependency was underspecified. Must include MPI as a hard dependency on QE.
* Update QMCPACK dependencies for HDF5, CMake and Boost.
* QMCPACK clean-up, more consistent use of spec vs. self.spec.
* Add support for collective I/O variant of QMCPACK.
* Update QMCPACK conflicts for QE and PHDF5 variants.
* Use built-in install method for QMCPACK starting with 3.6.0
* QMCPACK compiler C++14 conflicts were off by one version.
* QMCPACK package needs to setup_environment method.
* In support of PR#10252, get rid of slashes in string.
* Migrate these to the CUDA package and make a seperate PR.
* In support of PR#10252, get rid of join_path for nexus.
* In support of PR#10252, work around concretizer limitation.
* In support of PR#10252, convert to conditionals to if-else clauses for compactness.
* In support of PR#10252, get rid of extra space and new line in warning messages.
"spack install" will install all packages added to the current
environment. When this included external packages, the environment
update would fail because it would attempt to copy log files that
were only generated if Spack handled the install itself. This skips
that step for external packages.
* Allow overwrite nonexistent and multiple packages
initial implementation
give one prompt to users instead of a prompt per spec
testing
* flake
* bugfix: install overwrite check each spec against installed
* python3 compliance for filter/map
* Updated MPI and TAU versions in the TAU package
* Updated PDT versions
* Added support for Python (+python), default to `False`
* Cleaned up binutils, python, mpi usage.
* Updated binutils install to add additional header files to the include/extra directory.
* Resolving review problems with TAU and binutils packages.
The binutils package was updated to include support for installing
the ELF headers as a +headers variant. The TAU package was updated
to use all known Spack dependencies.
* r-gamlss-data: new package at 5.1-0
* r-gamlss-dist: new package at 5.1-1
* r-gamlss: new package at 5.1-2
* r-gamlss: add mass, survival, nlme imports
Fixes#10361Fixes#6634
When mkl isnt in the spec, still write an explicit mkl entry to
prevent numpy from looking in system dirs and using a system install
of mkl. Do the same for openblas and atlas (although mkl was the only
system install reported to interfere with Spack's choice).
* Updating nalu-wind, nalu, openfast, and tioga packages. Includes
improved handling of +shared variant.
* Add fftw and catalyst support to nalu-wind.
* Restrict ParaView to use matplotlib versions before 3 (which
require Python 3)
* py-modred: New package
Parallelized python module for finding modal decompositions and
reduced order models.
* fix license
I think?
* Add dependency on py-numpy
and remove commented out code
* vigra: new package
* Better constraints and types on some depends_on. Use site_packages_dir variable for Python install dir. Explicit switch-offs where available. Change some local variables to suit style checks.
* Take care of lines too long
* Explicit WITH_HDF5=ON
