Commit graph

31651 commits

Author SHA1 Message Date
Jack Morrison
84faf5a6cf
intel-mpi-benchmarks: Add MPI implementation check variant (#37363)
* Add MPI implementation check variant to Intel MPI Benchmarks

* [@spackbot] updating style on behalf of jack-morrison
2023-05-30 16:37:58 -05:00
Eric Berquist
9428749a3c
Update SST packages to 13.0.0 (#37467)
* add sst-{core,elements,macro} v13.0.0

* Add newest DUMPI versions and remove unavailable ones

* update maintainer lists

* sst-core: tracking and profiling flags

* sst-elements with Pin requires the Pin location

* sst-core: Zoltan integration was removed in version 12

* spack style fixes

* sst-core: ensure Python is in the sst{sim,info}.x rpaths

* sst-macro: update homepage and maintainers

* spack style --fix
2023-05-30 16:35:33 -05:00
Michael Kuhn
efdac68c28
julia: fix build for @1.8.4:1.8.5 (#37990)
julia@1.8.4:1.8.5 fails to build because it does not find libstdc++ (see https://github.com/JuliaLang/julia/issues/47987).
2023-05-30 13:49:15 -07:00
Carlos Bederián
5398c31e82
ucx: add 1.14.1 (#37991) 2023-05-30 13:46:39 -07:00
Thomas Madlener
188168c476
podio: Add 0.16.5 tag (#37994) 2023-05-30 13:39:15 -07:00
Michael Kuhn
4af84ac208
gobject-introspection: add 1.76.1 (#37995) 2023-05-30 13:37:53 -07:00
Manuela Kuhn
deb8b51098
py-dunamai: add 1.17.0 (#38003) 2023-05-30 15:34:15 -04:00
Manuela Kuhn
0d582b2ea9
py-duecredit: add 0.9.2 (#38002) 2023-05-30 15:33:54 -04:00
Manuela Kuhn
f88b01c34b
py-datalad-container: add 1.2.0 (#38000) 2023-05-30 15:28:34 -04:00
Manuela Kuhn
0533c6a1b8
py-datalad-metalad: add 0-4-17 and new dep py-datalad-deprecated (#37993)
* py-datalad-metalad: add 0-4-17 and new dep py-datalad-deprecated

* Fix style
2023-05-30 15:18:15 -04:00
Manuela Kuhn
f73d5c2b0e
py-cryptography: add 40.0.2 (#37925)
* py-cryptography: add 40.0.2

* Add pkgconfig dependency
2023-05-30 10:26:17 -05:00
Tamara Dahlgren
567d0ee455
tests/hdf5: convert to new stand-alone test process (#35732) 2023-05-29 16:56:17 +02:00
Tamara Dahlgren
577df6f498
sqlite: convert to new stand-alone test process (#37722) 2023-05-29 07:59:23 -04:00
Harmen Stoppels
8790efbcfe
Remove patchelf self-relocation (#33834) 2023-05-29 13:14:24 +02:00
Tamara Dahlgren
212b1edb6b
tests/biobambam2: convert to new stand-alone test process (#35696) 2023-05-29 12:54:38 +02:00
snehring
d85a27f317
sentieon-genomics: replacing square brackets in help (#37622) 2023-05-29 12:52:36 +02:00
Chris White
5622afbfd1
amgx: add v2.2.0 and v2.3.0 (#37567) 2023-05-29 12:42:36 +02:00
Carlos Bederián
f345038317
nwchem: fix non-fftw fftw-api providers (#37442) 2023-05-29 12:41:41 +02:00
Michael Kuhn
e43d4cfee0
glib: add 2.76.3 and 2.76.2, update build systems (#37226)
This also converts the package to the new way of handling multiple build
systems.

Co-authored-by: michaelkuhn <michaelkuhn@users.noreply.github.com>
2023-05-29 06:38:57 -04:00
Vanessasaurus
7070658e2a
Automated deployment to update package flux-core 2023-05-15 (#37684)
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-05-29 12:35:22 +02:00
dependabot[bot]
fc4b032fb4
build(deps): bump codecov/codecov-action from 3.1.3 to 3.1.4 (#37688)
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 3.1.3 to 3.1.4.
- [Release notes](https://github.com/codecov/codecov-action/releases)
- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md)
- [Commits](894ff025c7...eaaf4bedf3)

---
updated-dependencies:
- dependency-name: codecov/codecov-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-05-29 12:34:34 +02:00
Vanessasaurus
8c97d8ad3f
add flux-security variant to flux-core (#37689)
This will build flux-security separately to have a flux-imp
that can be defined in a flux broker.toml. Note that the user
that wants a multi-user setup is recommended to create a view,
and then a system/broker.toml in flux config directory that
points to it.

Signed-off-by: vsoch <vsoch@users.noreply.github.com>
Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2023-05-29 12:34:07 +02:00
Alberto Invernizzi
26107fe6b2
highfive: add newer versions + add git repo (#37635)
* add versions
* add develop pointing to git@master
2023-05-29 06:09:02 -04:00
Tamara Dahlgren
9278c0df21
binutils: convert to new stand-alone test process (#37690) 2023-05-29 11:59:09 +02:00
Tamara Dahlgren
37e95713f4
libsigsegv: convert to new stand-alone test process (#37691) 2023-05-29 11:58:39 +02:00
SXS Bot
3ae8a3a517
spectre: add v2023.05.16 (#37716)
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2023-05-29 11:56:21 +02:00
Tamara Dahlgren
031af84e90
m4: convert to new stand-alone test process (#37723) 2023-05-29 11:49:28 +02:00
Annop Wongwathanarat
7d4b65491d
armpl-gcc: add version 23.04.1 (#37907) 2023-05-29 05:49:19 -04:00
Harmen Stoppels
3038d1e7cd
Use @= in some packages (#37737)
Change the pattern @x.y:x.y.0 -> @=x.y

Co-authored-by: haampie <haampie@users.noreply.github.com>
2023-05-29 11:47:00 +02:00
Lehman Garrison
b2e6ef97ce
hdfview: add 3.1.4, 3.2.0, 3.3.0. Update dependencies. (#37745) 2023-05-29 11:41:44 +02:00
Tamara Dahlgren
e55236ce5b
tests/arborx: convert to new stand-alone test process (#37778)
Co-authored-by: Andrey Prokopenko <andrey.prok@gmail.com>
2023-05-29 11:33:07 +02:00
Alec Scott
68dfd6ba6e
hbase: add v2.5.3 (#37518)
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-05-29 11:29:11 +02:00
Jim Galarowicz
38d2459f94
survey: add v1.0.8 (#37385) 2023-05-29 11:26:56 +02:00
Nicolas Cornu
e309f367af
catch2: new versions (#37742) 2023-05-29 11:26:06 +02:00
Harmen Stoppels
3b59c95323
fix InternalConcretizerError msg (#37791) 2023-05-29 11:24:43 +02:00
Howard Pritchard
fddaeadff8
OPENMPI: disable use of sphinx (#37717)
Sphinx is used to build Open MPI manpages, etc. as part of the make dist
process to create release tarballs.  There should be no need/use to do
this within Spack.  Also some sites have older Sphinx installs which
aren't compatible with the needs of the Open MPI documentation.
For example, attempts to install openmpi@main fail at NERSC owing to
such a situation.

Since Spack normally is used to build from release tarballs, in which
the docs have already been installed, this should present no issues.

This configuration option will be ignored for older than 5.0.0 Open MPI releases.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2023-05-29 11:23:42 +02:00
Joel Falcou
c85eaf9dc5
Add package for KUMI tuple library (#37795) 2023-05-29 11:23:06 +02:00
Brian Vanderwende
ddec7f8aec
bbcp: fix cloning "master" version (#37802) 2023-05-29 11:21:48 +02:00
AMD Toolchain Support
f057d7154b
NAMD: add AVXTILES support (#37040) 2023-05-29 11:10:09 +02:00
Tamara Dahlgren
a102950d67
berkeley-db: convert to new stand-alone test process (#35702) 2023-05-29 10:56:42 +02:00
Howard Pritchard
783be9b350
dealii - add platform-introspection variant (#37833)
This option is needed for DFT FE - or more accurately the check needs to
be checked off for a number of platforms or else the code doesn't work.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2023-05-29 10:56:03 +02:00
Juan Miguel Carceller
27c8135207
xrootd: add patch for when libraries are installed in lib64 (#37858)
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-05-29 10:36:57 +02:00
Tamara Dahlgren
77ce4701b9
Bugfix/tests: add slash to test log message (#37874) 2023-05-29 10:36:36 +02:00
Juan Miguel Carceller
73ad3f729e
dd4hep: add patch to fix missing hits when using LCIO (#37854)
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-05-29 10:35:14 +02:00
Jim Edwards
1e7a64ad85
parallelio: add v2.6.0 release and ncint variant (#37805) 2023-05-29 10:19:15 +02:00
Tamara Dahlgren
3a5864bcdb
tests/sip: convert to new stand-alone test process (#35693) 2023-05-29 10:16:35 +02:00
Alec Scott
7e13a7dccb
cbc: add v2.10.9 (#37974) 2023-05-29 04:04:28 -04:00
Alec Scott
e3249fa155
bedops: add v2.4.41 (#37972) 2023-05-29 04:04:06 -04:00
Thomas-Ulrich
0c20760576
pumi: fix simmodsuite base variant, and mpi lib name (#37401) 2023-05-29 09:59:32 +02:00
Alec Scott
7ee7995493
cracklib: add v2.9.9 (#37976) 2023-05-29 03:59:13 -04:00