Commit graph

24713 commits

Author SHA1 Message Date
Adam J. Stewart
1679274ac2
py-horovod: add py-tensorflow-estimator dependency (#28674) 2022-01-29 20:22:19 -06:00
Jen Herting
c78a754e5d
New package: py-kaldiio (#28643)
* espnet first build with depends

* fixed flake8

* updated to lastest version and removed python dependency

* changed to pypi and version 2.17.2

* [py-kaldiio] depends on py-pytest-runner

* [py-kaldiio] updated copyright

Co-authored-by: Sid Pendelberry <sid@rit.edu>
2022-01-29 12:52:23 -06:00
Valentin Volkl
813a0d9b19
prmon: better testing, fix checksums (#28672)
* prmon: make sure integration tests do not run in parallel

Some integration tests fail if not run on an otherwise idle machine.

* prmon: run unittests based on googletest

* prmon: fix checksums
2022-01-29 14:32:57 +01:00
Seth R. Johnson
aece700e14
superlu: simplify cmake logic and fix cuda conflict (#28658)
* superlu-dist: use CMakePackage helper functions

* Fix #28609

It's OK to have CUDA in the dependency tree as long as it's not being
used for superlu-cuda.
2022-01-29 12:58:09 +00:00
Pat Riehecky
a98a261b74
Update Packages: py-celery py-kombu py-amqp py-pytz py-click-plugins (#28648) 2022-01-28 16:47:10 -07:00
Pat Riehecky
6f3670d1eb
New Package: py-python-dotenv (#28651) 2022-01-28 14:23:25 -07:00
Pat Riehecky
f189e5eb1c
Update Package: py-pre-commit (#28665) 2022-01-28 14:36:48 -06:00
Massimiliano Culpo
bc06c1206d
macholib, altgraph: update vendored dependency (#28664) 2022-01-28 10:55:12 -08:00
Massimiliano Culpo
4bd761d1d5
Update actions/setup-python to latest version (#28634) 2022-01-28 14:17:59 +01:00
Graeme A Stewart
02b48f5206
prmon: add up to v3.0.1, add new maintainers (#28657)
* Update prmon package to latest versions

Add recent versions of the prmon package
Add the spdlog dependency for versions >=3
Add package developers as additional maintainers
Update name of development branch to 'main'

* Correct checksum for v3.0.1
2022-01-28 04:42:02 -07:00
Michele Martone
cce8f3faf5
librsb: added v1.2.0.11/v1.3.0.0 (#28637) 2022-01-28 11:46:54 +01:00
Tim Haines
5519289f1d
fpchecker: add v0.3.5 (#28639)
Co-authored-by: Tim Haines <thaines@cs.wisc.edu>
2022-01-28 11:44:18 +01:00
Nils Leif Fischer
d80241a203
spectre: allow disabling debug symbols (#28511)
* spectre: allow disabling debug symbols

* spectre: fix PCH builds

* spectre: support builds with shared libs
2022-01-28 11:40:02 +01:00
Desmond Orton
1e1e3ae80a
metabat: switch to CMakePackage, deprecate old versions (#28384) 2022-01-28 11:34:35 +01:00
kwryankrattiger
a3755e5c76
ParaView: Require Ninja for builds (#28650) 2022-01-28 11:30:23 +01:00
Satish Balay
4c3bc0d3dc
slepc: switch from using -with-arpack-dir to --with-arpack-include/lib options (#28654)
Also save configure.log, make.log
2022-01-28 11:20:35 +01:00
Adam J. Stewart
46b9911289
py-torch: add v1.10.2 (#28653) 2022-01-28 11:01:17 +01:00
Vasileios Karakasis
e06319a3dc
Add more ReFrame versions (#28655) 2022-01-28 02:42:07 -07:00
Desmond Orton
bf80a9f83a
at-spi2-core: patch for version 2.40.1 and beyond (#28497)
at-spi2-core is automatically selecting dbus-broker and enabling systemd if it finds dbus-broker-launch which some systems might have even without systemd being part of the actual spack environment. This is not ideal for a spack package.
2022-01-28 10:40:26 +01:00
Tom Vander Aa
f7f7a168e9
ucx backtrace-detail variant (#28625)
ucx has the configure option --[enable|disable]-backtrace detail.
This option is not explicitely set by spack, causing problems on my system, because
./configure does not find the bfd.h header file / libbfd.so library.

Added variant + dependencies (binutils). Disabled by default
2022-01-28 10:35:10 +01:00
liuyangzhuan
80f92cfdde
gptune: add variants (mpispawn, hypre) (#27733)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-01-28 10:31:56 +01:00
Toyohisa Kameyama
693f0958b5
trilinos: version 12 cxxstd flags (#28582)
* trilinos: version 12 requires cxxstd=11

* trilinos: use cmake version 3.21 or old when trilinos version 12

* conflict cxxstd=17 and cmake@3.2.[01]

* trilinos: version 12 requires cxxstd=11.

* Trilinos_CXX11_FLAGS is set to ' ' to avoid inject C++11 flag.

* set Trilinos_CXX11_FLAGS only version 12 or older.
2022-01-28 01:29:18 -07:00
Seth R. Johnson
2fd26be988
Trilinos: minimize E4S CUDA build (#28591)
* trilinos: update dependencies

Use the tribits deps to clarify some dependencies, and group some together
using `with` statements, eliminating some transitive conflict duplication.

* trilinos: Restricit cuda incompatibility

* e4s: vastly reduce number of packages in trilinos-cuda build

Not clear who the customers of cuda-enabled trilinos are, or what options
they need, or which sets of options conflict...

* e4s: remove ~wrapper from trilinos+cuda
2022-01-27 21:08:15 -07:00
Jen Herting
405adce5ae
New package: py-wordcloud (#28482)
* [py-wordcloud] created template

* [py-wordcloud]

- added dependencies
- added homepage
- added description
- removed fixmes
- updated copyright
2022-01-27 15:08:57 -07:00
Jen Herting
a2170c9e04
New package: py-spectral (#28481)
* simple build of spectral

* fixed trailing whitespace for style

* [py-spectral] updated copyright

* [py-spectral] runtime imports py-numpy

Co-authored-by: Sid Pendelberry <sid@rit.edu>
2022-01-27 14:57:14 -07:00
Jen Herting
bae2a2660e
New package: py-deepecho (#28488)
* [py-deepecho] created template

* [py-deepecho]

- added dependencies
- added homepage
- added description
- removed fixmes
- updated copyright

* [py-deepecho] flake8

* [py-deepecho] removed .999

* [py-deepecho] added dependency on py-pytest-runner
2022-01-27 15:25:28 -06:00
Harmen Stoppels
08fb190264
python: 3.9.10, 3.10.2 (#28635) 2022-01-27 14:03:02 -07:00
Massimiliano Culpo
b9b1665cb2
Pin the version of "coverage" in CI to 6.2 (#28638)
Hotfix for coverage v6.3 blocking our CI workflows
2022-01-27 20:35:05 +01:00
Paul Kuberry
ec9748eaf3
xyce: Add cxxstd variant with only valid value of 11 (#28616) 2022-01-27 11:40:57 -05:00
Max Zeyen
28ea1bab68
gpi-space: add new package (#27989) 2022-01-27 07:35:20 -07:00
Gregory Lee
61ea456f5d
conduit: add v0.8.1 and patch to add algorithm for std sort (#28618) 2022-01-27 12:26:18 +01:00
Tim Moon
71c8375862
Update CMake to 3.21 in LBANN-related projects (#28507)
* Update CMake to 3.21 in LBANN-related projects

* Allow CMake 3.17 for older versions of LBANN, Hydrogen, Aluminum
2022-01-27 12:21:45 +01:00
kwryankrattiger
8106983ddb
Vtkm kokkos variant (#28363)
* VTK-m: Make vtk-m consistent with ROCmPackage

* VTKm: Add kokkos variant

Specifying +kokkos will enable kokkos backend.
Specifying +kokkos with +rocm will require a kokkos with a ROCm backend.
Specifying +cuda enables VTK-m native CUDA backend. VTK-m native cuda backend
  is not compatible with the kokkos +cuda backend.

* VTK-m: Add cuda_native variant

Required to allow specifying a vtk-m spec the selects a
cuda_arch and predictably propagate that to the underlying kokkos
dependency.

This also makes explicit selecting kokkos with a cuda backend or using
the VTK-m cuda backend.
2022-01-27 01:08:13 -07:00
Nils Leif Fischer
28bda22e52
New packages: py-quaternionic and py-spherical (#28611) 2022-01-26 17:48:43 -05:00
kwryankrattiger
991438a242
Mesa(18): Use libllvm virtual package (#28365)
* Mesa(18): Use libllvm virtual package

* Mesa patch configuration

Patch Mesa to define LLVM_VERSION_SUFFIX if llvm is pre-release

* Patch llvm-config to define LLVM_VERSION_SUFFIX
2022-01-26 15:16:41 -05:00
Harmen Stoppels
92abffa2d4
cmake: new version 3.22.2 (#28608) 2022-01-26 11:28:00 -07:00
Massimiliano Culpo
3cf5df7e3b
Ensure "spack unit-test" can bootstrap clingo (#28572) 2022-01-26 14:19:15 +01:00
Valentin Volkl
b700335be7
lhapdfsets: add new package (#25477) 2022-01-26 04:58:58 -07:00
haralmha
b7bb687d17
vbfnlo: use patch method and filter_file instead of patch directive (#28506)
* Patch only for @3.0.0beta5

* Replace version specific patch file with patch function

Co-authored-by: root <root@hahansencs8.cern.ch>
2022-01-26 11:16:02 +01:00
Harmen Stoppels
e3d62b2f7b
Print 'Waiting for another process to install x, y, z' in distributed builds (#28535)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-01-26 10:42:08 +01:00
Seth R. Johnson
5300cbbb2e
trilinos: Enable LAPACK functionality in amesos2 (#28577) 2022-01-25 17:30:40 -08:00
Richarda Butler
38a1036c46
Bugfix: Tasmanian stand alone test (#28496) 2022-01-26 01:10:28 +00:00
Ryan Marcellino
75db515af2
alluxio: new version v2.7.2 (#28589) 2022-01-25 19:46:37 -05:00
Adam J. Stewart
2ace2a750b
Fix build of libnetworkit/py-networkit (#28458) 2022-01-25 17:07:43 -06:00
Cyrus Harrison
7134cab8c4
occa: new release 1.2.0 release, and commit refs for prior releases (#28590) 2022-01-25 13:26:32 -07:00
Adam J. Stewart
4c57503e7e
py-tensorboard-plugin-wit: install wheel (#28566) 2022-01-25 14:00:17 -06:00
Daniele Cesarini
1f3f1100b3
New packages: BigDFT suite (#26853) 2022-01-25 10:35:09 -08:00
Seth R. Johnson
edb99a2b05
Nalu wind: simplify version dependencies with trilinos (#28588)
* nalu-wind: simplify trilinos variant requirements

* nalu-wind: simplify version dependencies

With spack versioning, 'master' < 'develop' and 'develop' > 2.18.2.
2022-01-25 12:22:21 -05:00
eugeneswalker
fe76d6563a
tau: %clang needs cmake for build (#28531)
* tau%clang needs cmake for build

* specify cmake@3.14:
2022-01-25 09:18:56 -08:00
Mark Grondona
4af334fb7e
flux-pmix: add new package (#28559)
* pmix: add v4.1.0

* flux-pmix: add flux-pmix package
2022-01-25 09:35:36 -07:00