Amjad Kotobi
04fdcbed09
ruby-narray: Added git master branch ( #19817 )
2020-11-09 13:04:22 -06:00
ilbiondo
740cc4058b
tskit package ( #19725 )
...
* tskit package
* Update var/spack/repos/builtin/packages/tskit/package.py
I can't see any hard requirement for 3.6:
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* fixes following PR review
* Update var/spack/repos/builtin/packages/tskit/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-09 13:03:09 -06:00
Ethan Stam
e73e7cf0ad
ParaView: correct path for PARAVIEW_VTK_DIR ( #19770 )
...
* ParaView: correct path for PARAVIEW_VTK_DIR
* Update formatting
2020-11-09 13:02:00 -06:00
Mark Olesen
ac8a07ef4a
openfoam / openfoam-org : handle arch naming differences #19777 ( #19778 )
...
- issue caused by the openfoam-org internal naming for their
newly added support for aarch64
Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2020-11-08 20:26:51 -06:00
Michael Kuhn
0857648313
perl: make 5.32.0 the preferred version ( #19799 )
...
Version 5.32.0 has been out for quite a while and Linux distributions
are shipping it. I have also done a rebuild of some common packages with
the new version. Let's make it the preferred version.
2020-11-08 10:54:22 -06:00
Adam J. Stewart
1e35faa932
Bash: add new patches, maintainer ( #19798 )
2020-11-07 20:13:35 -06:00
mic84
765b4c5d2f
amrex: new options names for version > 20.11 ( #19769 )
...
* amrex: new options names for version > 20.11
* amrex: change option name DIM -> AMReX_SPACEDIM
* Update var/spack/repos/builtin/packages/amrex/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-07 14:10:08 -06:00
Brian Van Essen
9cd0f00607
Added code to help DiHydrogen find cuDNN and CUB ( #19783 )
...
* Added code to help DiHydrogen find cuDNN and CUB
* Cleaning up dependencies on CUB and adding guards for when newer
versions of CUDA include CUB and it should be excluded.
* Changed Hydrogen to disable half support by default.
* Have LBANN force Hydrogen and DiHydrogen to build without half when the variant is disabled.
* Added explicit variants to enusre that if LBANN is build without Cuda,
Aluminum, or Half support, it enforces those constraints for Hydrogen
and DiHydrogen. Cleaned up the use of Python extend versus append in
LBANN and DiHydrogen recipes.
* Fixed Flake8
2020-11-07 14:09:00 -06:00
Michael Kuhn
887bf734e4
fdupes: new package ( #19747 )
2020-11-07 14:08:15 -06:00
vvolkl
1d7d4a9071
[evtgen] add env var ( #19787 )
...
* [evtgen] add env var
* Update var/spack/repos/builtin/packages/evtgen/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-07 14:06:41 -06:00
Itaru Kitayama
e87266c646
Add the scorep package dependency. ( #19742 )
...
Co-authored-by: Itaru Kitayama <itaru.kitayama@riken.jp>
2020-11-06 21:18:49 -06:00
Dr. Christian Tacke
c8b92ef34b
fmt: Add Version 7.1.2 ( #19756 )
2020-11-06 21:12:45 -06:00
Dr. Christian Tacke
3b4558fe6c
fairlogger: Add Version 1.9.0 ( #19758 )
2020-11-06 21:12:19 -06:00
Chen Wang
d085d53ebc
New version of Recorder: 2.1.6 ( #19760 )
2020-11-06 21:11:49 -06:00
eugeneswalker
fbc7cefcf7
make TIMER compatible with LLVM F18 ( #19765 )
2020-11-06 21:11:13 -06:00
Thomas Madlener
381305da0f
[root] fix package definition ( #19775 )
2020-11-06 21:04:23 -06:00
darmac
1d52bbdf17
Add new package: predixy ( #19776 )
2020-11-06 21:03:33 -06:00
Andrew W Elble
dcf3d8332a
cp2k: fix lmax variant to use tuple ( #19780 )
...
* cp2k: fix lmax variant to use tuple
discovered during testing #19501
@dev-zero
* retain conversion to string
2020-11-06 20:58:38 -06:00
Cyrus Harrison
ef9b8da282
add new vtk-h versions ( #19785 )
2020-11-06 20:53:36 -06:00
eugeneswalker
8dc8155ed5
fast-global-file-status needs elf ( #19789 )
2020-11-06 20:52:19 -06:00
eugeneswalker
73773ef9f3
spot: add v2.9.4 ( #19790 )
2020-11-06 20:51:48 -06:00
Michael Kuhn
f447657395
expat: add 2.2.10 ( #19791 )
2020-11-06 20:51:04 -06:00
Michael Kuhn
d8f2e54ebf
py-setuptools: add 50.3.2 ( #19792 )
2020-11-06 20:50:17 -06:00
Michael Kuhn
010ad6011e
glib: add 2.66.2 and 2.64.6 ( #19793 )
2020-11-06 20:49:21 -06:00
Tom Payerle
07b1ddee23
virtualgl: Change virtual jpeg dependency to libjpeg-turbo dep ( #19795 )
...
See #19784
virtualgl CMake system is looking for a specific libjpeg-turbo include
file, not present in libjpeg (currently the only other jpeg provider)
2020-11-06 20:47:09 -06:00
Adam J. Stewart
319c4f2e9e
meson: set STRIP on macOS ( #19677 )
...
* at-spi2-core: add new version
* Add strip hacks
* meson: set STRIP on macOS
2020-11-07 00:34:47 +01:00
ilbiondo
a3854700fb
cget package ( #19728 )
...
* cget package
* Update var/spack/repos/builtin/packages/cget/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/cget/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/cget/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-06 16:39:42 -06:00
Frank Willmore
2df73cae38
Mumps oneapi ( #19786 )
...
added oneapi compiler to directives for mumps package
Co-authored-by: Frank Willmore <willmore@anl.gov>
2020-11-06 13:56:42 -08:00
Andrew W Elble
f59bbf9c3a
py-grpcio: workaround build failures pending new release ( #19710 )
...
https://github.com/grpc/grpc/pull/24449 grpc/grpc#24248
2020-11-06 15:02:11 -05:00
Jen Herting
1f8ca07f46
New package: code-server ( #16076 )
...
* [code-server] created template
* [code-server] installing base server
* [code-server] added description and homepage
* [code-server] removed fixmes
* [code-server] git version > 2 is recommended
* [code-server] added version 3.1.1
* [code-server] flake8
* [code-server] added version 3.4.1
* [code-server] cp() -> install_tree()
* [code-server] removes predefined utilies
* [code-server] ln() -> symlink()
2020-11-06 12:56:45 -06:00
Jen Herting
1b18e8fbad
New Package: libcumlprims ( #19108 )
...
* [libcumlprims] created template
* [libcumlprims] setting up version urls and added versions
* [libcumlprims] added dependencies
* [libcumlprims] installing prebuild binaries
* [libcumlprims] fixing dependencies
* [libcumlprims] trying to fix cumlprims includedir
* [libcumlprims] updated envvar to SPACK_INCLUDE_DIRS
* [libcumlprims] typoo
* [libcumlprims] added homepage and description. removed fixmes
* [libcumlprims] cp -> install_tree
* [libcumlprims] removed unused import
* [libcumlprims] using new version of updating header files env vars
* [libcumlprims] flake8
2020-11-06 12:55:29 -06:00
Adam J. Stewart
3953f6af95
oneDNN: add v1.7 ( #19718 )
2020-11-06 11:45:33 -06:00
Adam J. Stewart
3c4ee6d3cb
py-scipy: add v1.5.4 and master ( #19757 )
2020-11-06 11:45:14 -06:00
Adam J. Stewart
df3cc079eb
GDAL: add v3.2.0 ( #19685 )
...
* GDAL: add v3.2.0
* Fix typo: satisfes -> satisfies
Co-authored-by: Andrew W Elble <aweits@rit.edu>
Co-authored-by: Andrew W Elble <aweits@rit.edu>
2020-11-06 11:42:46 -06:00
Adam J. Stewart
e26d01022e
py-numpy: add v1.19.4 ( #19678 )
2020-11-06 11:41:48 -06:00
Sheng Di
2cb676e8d7
add z-checker ( #19738 )
...
* revise z-checker's package.py
* add mpi dependency to z-checker
* add one whitespace required by Flake8
* trailing whitespace
Co-authored-by: Sheng Di <sdi1@anl.gov>
2020-11-06 07:48:11 -06:00
Brian Van Essen
f041876470
Added CUB dependency to Aluminum ( #19737 )
...
* Added CUB dependency to Aluminum
* Added hash for version 0.6.0
* Added a maintainer field and slight cleanup.
* Cleanup extend versus append
2020-11-05 18:01:49 -06:00
Brian Van Essen
16c8cdaef7
LBANN update HWLOC versions ( #19683 )
...
* Updates in LBANN an Aluminum code now allow working with versions
HWLOC 1.11.x and 2.x and up.
* Updating the minimum CMake version to address a pending PR in LBANN
that will require C++17 support and needs CMake to properly separate
the compiler flags from nvcc.
* Clarified the support for different versions of HWLOC in LBANN
2020-11-05 16:28:27 -06:00
ilbiondo
dcd514c321
filtlong package ( #19732 )
...
* filtlong package
* Update var/spack/repos/builtin/packages/filtlong/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-05 11:04:24 -06:00
ilbiondo
4c254c6c9f
bamaddrg package ( #19729 )
...
* bamaddrg package
* Change version to URL rather than git
2020-11-05 11:02:43 -06:00
Andrew W Elble
08e825f474
kokkos-legacy: fix host_arch/gpu_arch variants ( #19754 )
...
'default' specifies a value that is not present in 'values'.
2020-11-05 17:31:11 +01:00
Andrew W Elble
6dc25e7dbf
py-pykwalify: fix conflict directive (missing '^') ( #19753 )
2020-11-05 17:30:32 +01:00
Andrew W Elble
fa7ba11d1a
py-quantities: fix conflict directive (missing '^') ( #19752 )
2020-11-05 17:30:08 +01:00
Andrew W Elble
9bca9611c5
py-flye: fix conflict directive (missing '%') ( #19751 )
2020-11-05 16:53:24 +01:00
Andrew W Elble
9908e7a590
pfunit: fix conflict directive (missing '+') ( #19750 )
2020-11-05 16:26:26 +01:00
Andrew W Elble
d7335185e3
heffte: fix conflict directive (missing '^') ( #19749 )
2020-11-05 16:26:03 +01:00
Adam J. Stewart
09ec3e9268
Update packages.yaml format references in packages ( #19741 )
2020-11-05 15:44:00 +01:00
Andrew W Elble
c4b4cd4973
py-llvmlite: fix llvm compatibility version ( #19739 )
...
won't build with llvm 11
2020-11-04 15:17:19 -06:00
Chris White
4cd711cb79
Axom: update package ( #19717 )
...
* update spack package from axom's main repo
* flake8, plus loop over possible clangformat paths
2020-11-04 14:37:24 -06:00
Jeremy
6f4e2e58c3
10.1 release and various bug fixes for SST packages ( #19719 )
2020-11-04 12:47:41 -06:00
arjun-raj-kuppala
cc0a585816
AMD - Bumped up version for hip-rocclr, rocm-opencl, rocm-smi-lib ( #19721 )
2020-11-04 12:44:59 -06:00
Sreenivasa Murthy Kolam
3daa7b7b40
update rocm-bandwidth-test,rocm-dbgapi,rocprofiler for rocm 3.9.0 ( #19724 )
...
* update rocm-bandwidth-test,rocm-dbgapi,rocprofiler for rocm 3.9.0
* bump up rocm-gdb for rocm-3.9.0
2020-11-04 12:43:40 -06:00
ilbiondo
ab046403f6
admixtools package ( #19727 )
2020-11-04 12:37:15 -06:00
Satish Balay
5b02910e9c
petsc add version 3.14.1 ( #19730 )
2020-11-04 12:27:11 -06:00
Veselin Dobrev
5511c29869
New MFEM version: 4.2 ( #19684 )
2020-11-04 12:26:39 -06:00
Robert Maynard
823a3fa646
Added HIP support to VTK-m package ( #19523 )
2020-11-04 12:25:17 -06:00
Satish Balay
c2b943c209
Trilinos: fix error when configuring downstream dependency
2020-11-04 11:28:14 -05:00
darmac
44d406a1aa
Add new package: abi-compliance-checker ( #18737 )
...
* Add new package: abi-compliance-checker
* refine dependencies
* change exuberant-ctags to universal-ctags
2020-11-04 14:37:24 +01:00
Andrew W Elble
efb26bb14f
libusb: disable udev ( #19713 )
...
* libusb: disable udev
spack has no libudev/systemd package currently
* convert to AutotoolsPackage
* remove spack import
2020-11-03 16:47:38 -06:00
Andrew W Elble
ddd2aa0ffc
sirius,spfft: fix defaults for amdgpu_target to be str, not tuple ( #19660 )
2020-11-03 12:43:16 -06:00
Glenn Johnson
6bcb7128e6
Regenerate patch for gate to include SGE script ( #19663 )
...
The previous patch left out the SGE.script file.
2020-11-03 12:42:40 -06:00
Glenn Johnson
4ba7ad5162
New package - gatepet2stir ( #19664 )
2020-11-03 12:41:47 -06:00
Sreenivasa Murthy Kolam
e93ac1a8bd
bump up hsakmt-roct ,hsa-rocr-dev,llvm-amdgpu version for 3.9.0 release ( #19668 )
...
* bump up version for 3.9.0 release
* update version of rocminfo for rocm-3.9.0
* bump up rocm-cmake version for rocm-3.9.0
* bump up rocm-smi and rocmdevice-libs for 3.9.0
* bumpup comgr version for rocm_ 3.9.0
* bump rocm-clang-ocl for rocm-3.9.0
* bump hipify-clang for rocm-3.9.0
2020-11-03 12:39:40 -06:00
Andrew W Elble
886ae9a83f
speexdsp: fix link dependency on FFT library ( #19714 )
...
without this, the library does not have a dependency
on the fft lib it was built with.
2020-11-03 12:36:24 -06:00
Desmond
95d63afa58
Package/py json get ( #19689 )
...
* py-json-get: new package at 1.1.1
* py-json-get: new package at 1.1.1
Co-authored-by: las_djorton <las_djorton@build.las.iastate.edu>
2020-11-03 12:35:26 -06:00
Andrew W Elble
b9d12c93ef
disable tests to fix build. ( #19697 )
2020-11-03 12:34:17 -06:00
mic84
001f90f411
amrex: new version 20.11 ( #19691 )
...
* amrex: new version 20.11
* Fix formatting issues
2020-11-03 12:33:45 -06:00
Geoffrey Oxberry
2c511a7dd0
new package: fprettify 0.3.6 ( #19699 )
2020-11-03 12:31:29 -06:00
Andrew W Elble
11fb0e17b0
py-pygobject: new version 3.38.0 ( #19709 )
...
fix to allow Gtk and others work from 'import gi' etc.
2020-11-03 12:29:59 -06:00
darmac
cefbc39356
Add new package: libbinio ( #19706 )
2020-11-03 12:27:45 -06:00
darmac
ffec64ce30
Add new package: jose ( #19707 )
2020-11-03 12:27:22 -06:00
darmac
b7421c1476
Add new package: libdatrie ( #19708 )
2020-11-03 12:26:54 -06:00
Daniel Arndt
6492b9a84e
Use commit instead of branch as version for dtk 3.1-rc2 ( #19712 )
2020-11-03 12:25:26 -06:00
Char Aznable
859fbae4fa
Trilinos: support cuda, hwloc, Kokkos_ARCH_* and c++ std ( #19119 )
2020-11-03 12:07:20 -06:00
Elliot Saba
771e8b6294
[julia]: CPU names are LLVM-style, must map across ( #19549 )
...
In this case, the `zen2` architecture is unknown; Spack must use the
LLVM-style `znver2` target instead.
2020-11-03 12:04:29 -06:00
Pieter Ghysels
8cc08bd88b
Trilinos: Add STRUMPACK dependency ( #19560 )
...
* Trilinos: Add STRUMPACK dependency
* break long lines, flake8 cleanup
* Use spec['strumpack'].libs.directories[0]
instead of spec['strumpack'].prefix.lib
because libraries may be in lib or lib64.
Likewise use headers.directories[0] iso prefix.include.
Suggested by adamjstewart
2020-11-03 12:04:12 -06:00
Wouter Deconinck
cd625e5974
[dire] dire is included in pythia8@8300: so dire depends_on adjusted ( #19628 )
2020-11-03 12:03:48 -06:00
Geoffrey Gunter
125b80d193
range-v3: add version 0.11.0 ( #19639 )
...
* range-v3: add version 0.11.0
This release drops support for llvm-3.9 per the release notes.
https://github.com/ericniebler/range-v3/releases/tag/0.11.0
* range-v3: rename 'develop' version to 'master'
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-03 12:03:19 -06:00
Satish Balay
dc3d03ed30
superlu-dist: update to version 6.4.0 ( #19682 )
2020-11-03 12:02:53 -06:00
Satish Balay
5b33157a45
petsc@3.14 update superlu-dist dependency [keep it open-ended for both petsc and superlu-dist future versions] ( #19686 )
2020-11-03 12:01:14 -06:00
Satish Balay
294715282a
py-petsc4py: add version 3.14.0 ( #19681 )
2020-11-03 12:00:50 -06:00
Tim Haines
7649186988
Elfutils: added v0.182 ( #19700 )
2020-11-03 16:37:35 +01:00
darmac
a920ef50dd
Add new package: istio ( #17829 )
2020-11-03 08:19:43 -06:00
darmac
5a54e39d71
Add new package: py-boom ( #18811 )
...
* Add new package: py-boom
* change name to py-boom-boot-manager
2020-11-03 08:18:28 -06:00
dunatotatos
4637d97d41
snakemake: add upper limit to allowed python versions ( #19705 )
...
Running v3.1.2 with Python 3.7 returns a SyntaxError close to `async=True`.
2020-11-03 12:13:00 +01:00
darmac
03b7404316
Add new package: abi-dumper ( #18738 )
...
* Add new package: abi-dumper
* refine dependencies
2020-11-03 11:20:06 +01:00
Brian Van Essen
d38fdb3854
Update cuDNN packages to check Power installation ( #19620 )
...
* Updated cuDNN package to check to make sure that target directory
exists before linking it.
* Fixed flake8
* Fixed Flake8
2020-11-02 20:08:44 -06:00
Hervé Yviquel
b4ea74c11b
allow ucx to build with more recent version of gdrcopy ( #19606 )
...
* allows UCX since v1.7 to build with more recent version of gdrcopy (v2.X)
* Update var/spack/repos/builtin/packages/ucx/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-02 15:53:11 -06:00
Satish Balay
2ca894bd1e
pumi add version 2.2.5 ( #19680 )
2020-11-02 14:02:50 -06:00
Satish Balay
4d6c9a8f29
omega-h: add version 9.32.5 ( #19679 )
2020-11-02 12:50:10 -06:00
Seth R. Johnson
62eab8923e
ROOT: use native CMakePackage functions in packages.py ( #19642 )
...
* root: update to built-in CMakePackage functions
* root: Disable options from missing variants
* Remove modification of CMAKE_PROGRAM_PATH
2020-11-02 16:21:44 +00:00
Scott McMillan
f621e97f47
Fix issue with NAMD patch not applying cleanly ( #19675 )
...
Co-authored-by: Scott McMillan <smcmillan@nvidia.com>
2020-11-02 10:12:15 -06:00
Tiziano Müller
acc075d79d
llvm: fix +lldb build with external ncurses on openSUSE ( #19627 )
...
fixes #19625
2020-11-02 07:39:21 -06:00
Harmen Stoppels
4fe56de72e
hip: revert using libs.directories[0] instead of prefix.lib ( #19671 )
...
Currently fails with:
Error: NoLibrariesError: Unable to recursively locate rocm-device-libs libraries
2020-11-02 09:54:29 +01:00
eugeneswalker
b2d6c63421
hip: setup run environments ( #19637 )
...
* hip: rocminfo is a runtime requirement
* hip: +setup_run_environment, +setup_dependent_run_environment
* hip: run environment: get lib dir using libs.directories[0], not prefix.lib
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-01 21:52:06 -06:00
Adam J. Stewart
a4dd8d5582
Scalapack: don't apply patches twice ( #19662 )
2020-11-01 15:15:04 -08:00
Adam J. Stewart
ea8ba48a32
meson: add new version, external find support ( #19658 )
2020-11-01 15:33:14 -06:00
Adam J. Stewart
750027e80f
libepoxy: remove meson dependency ( #19659 )
2020-11-01 16:11:46 -05:00
Adam J. Stewart
854aed2571
krb5: fix build with Apple Clang 12 ( #19657 )
2020-11-01 16:11:40 -05:00
Hervé Yviquel
f62efe5e2e
Fix rdma-core package installation ( #19643 )
...
* add python-docutils dependency
* adds symlink to script for better compatibility if py-docutils installation
* Improve post_install phase of py-docutils
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* fix review of rdma-core package
* improve formating of py-docutils package
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-11-01 10:08:06 -06:00
