Modifications:
* Added zlib dependency, starting from version 3.0.0
* Added memchecker support for debugging
* Remove mpirun and similar links if slurm is selected as a scheduler
* [hypre] Add the 'headers' property plus a small tweak in the 'libs'
property.
* [hypre] Add fallbacks for searching for '.libs' in 'prefix.lib64' and
in all of 'prefix'.
* [hypre] Fix style.
* [hypre] Use find_headers instead of find + HeaderList.
* added a new package file for PHIST (Pipelined, Hybrid-parallel Iterative Solver Toolkit)
* packages/phist: fix some formatting errors (too long lines etc)
and set allowed values for option "outlev"
* packages/phist: fix some more flake8 errors
* add headers property to netlib-lapack and intel-mkl
* ghost: fix finding cblas header and libs (at least for mkl and netlib-lapack, which provide headers())
* added a new package file for PHIST (Pipelined, Hybrid-parallel Iterative Solver Toolkit)
* packages/phist: fix some formatting errors (too long lines etc)
and set allowed values for option "outlev"
* packages/phist: fix some more flake8 errors
* phist: use headers property to find lapacke include dir
* phist: fix flake8 error
* phist: be more specific about dependencies and update version
* phist: state trilinos minimum version when building with Tpetra kernels
* gmp: add oldish version 5.1.3 with checksum
* phist: get rid of the 'petsc+complex' variant, it can be installed by kernel_lib=petsc ^petsc+complex
* phist: new version
* phist: fix version checksum
* Revert "add headers property to netlib-lapack and intel-mkl"
This reverts commit d8cb62905ebfb2cba186fd2d736d54a88a49d089.
* Revert "ghost: fix finding cblas header and libs (at least for mkl and netlib-lapack, which provide headers())"
This reverts commit d406a77ed7879c124fbaf1d757d002b9f0771620.
* phist: remove unused function
* phist: reorder package file versions/variants/depends_on/rest
* phist: some minor changes requested by @adamjsteward
* Add latest version of MPFR and patches for older versions
* Fetch and checksum patches instead of storing them
* Fix bug, version attribute was being overridden
* meme: added perl-xml-parser dependency, resolved issue. still need to fix ghostscript or image-magick, conversion not working.
* meme: fixed issue with libxslt/libxml2 conflict, and added imagemagick support
* meme: removing libxslt/libxml2 dependency lines
* meme: configure args
* meme: separating configure args
* meme: removing a comment, and hoping for travis to rebuild. site seems back up.
* meme: make image-magick optional
* meme: add comment referencing PR
* meme: bah flake8
* Promote to Autotools for simplicity; broaden Intel CPU opt targeting from SSE4.2 to AVX2
* make Intel CPU opt targeting same as in ../libxc
* flake8 W291
* use canonical means to pass (ahem) the test phase, h/t @adamjstewart
* revert f25d598 (unrelated merge)
* re-merge
* make py-setuptools a run-time-only dep for py-basemap and patch python package to only apply setuptools flag for build deps
* py-qtconsole does not require setuptools
* intel-xed: new package
The Intel X86 Encoder Decoder library for encoding and decoding
x86 machine instructions.
* intel-xed: style fixes for flake8.
* intel-xed: better style fix
* intel-xed: update to version 2018.02.14, add PYTHONPATH for
building with python 3, cleanup the opt flag.
The restrict compilation option with icc causes deadlock when multithreading is used. This issue has already been reported to the Scotch development team, but for current versions it is more reliable not to use the restrict compilation option.
* libtool: actually do symlinking correctly on darwin
Version 4 of the libtool/darwin debacle:
AutotoolsPackage hardcodes libtool & libtoolize into the autoreconf
stage, so the commands `libtool` and `libtoolize` MUST be present, and
shimming in glibtoolize into AutotoolsPackage when sys.platfrom ==
'darwin' does not work.
join_path(spec['libtool'].prefix.bin, 'libtool') still shadows system
BSD libtool (in apple-cctools, see PR #7177), but this shadowing could
be okay, depending on the combination of dependent specs.
* librom: new package
* Adding unzip package.
* Removing bzip2 dependency in unzip and raising an error when on Cray.
* Fixing error.
* Using conflicts statement for Cray detection in unzip package.
* add headers property to netlib-lapack and intel-mkl
* ghost: fix finding cblas header and libs (at least for mkl and netlib-lapack, which provide headers())
* fix flake8 errors
* ghost: remove unnecessary query parameter
* fix flake8 errors
* ghost: make it a CudaPackage (as suggested by @davydden, thanks!)
* ghost: missing whitespace
* Fix a bug when checking for 'xl' or 'xl_r' compiler.
* Add support for parallel build - the 's', 'c', 'd', and 'z' targets
are build separately allowing parallel builds.
* When build '+shared', inject all dependencies into the link lines of
the mumps libraries.
* Run the examples only when installing with the '--test' Spack option.
It seems there has been a change in concretization that resulted in
a request for a llvm latest (5.0.1) while not satisfying the later
more precise request for a version.
Remove the first line and only rely on the last.
A build of python@3.X had the following in the logs:
```
The necessary bits to build these optional modules were not found:
_dbm _gdbm _tkinter
```
As Tkinter is already a variant, we adopt the same strategy for dbm.
This includes:
* Added latest available versions (1.11.9, 2.0.0)
* Added variants to enable graphical output from lstopo
* Enabled build of the bundled netloc package if @2.0.0:
* Added dependency from numactl if @:1.11.9
* Added a constraint to avoid using hwloc@2.0.0 with openmpi
cube's configure only recognizes qt versions with single digit version
components and breaks with qt 5.10. Patch the configure files directly
to avoid having to regenerate them.
Mscgen is a small program that parses Message Sequence Chart descriptions and
produces PNG, SVG, EPS or server side image maps (ismaps) as the output.
See http://www.mcternan.me.uk/mscgen/
This is needed when using system lua on RHEL and clones where lua
is installed in /usr/lib64. Note that the path entry for lua in
packages.yaml should specify the major/minor version of lua (since
this is used to calculate the lua lib directory)
updated hoomd-blue to latest tagged release in repo. This version also supports newer gcc6 compilers, so added constraint for older version to avoid breaking existing installs.
+ Newer versions of zoltan2 are doing test compiles that link to parmetis. If
these checks don't find `metis.h`, the check fails.
+ This small tweak ensures that the zoltan2 configure step can find `metis.h`
that is provided by spack.
For hdf5 `1.8.10` and some compilers, the hdf5 build system adds the
'-ansi' flag. hdf5 1.8.10 is not actually ansi compliant so this
adds a patch to modify the places where it violates ansi
compatibility (which ends up being a few comments).
