Commit graph

25241 commits

Author SHA1 Message Date
eugeneswalker
ad6d28d9ad
e4s mini mac stack: add bzip2 (#29650) 2022-03-21 21:22:21 -06:00
Mark W. Krentel
26ff44388f
libunwind: add versions 1.6.2 and 1.6-stable (#29639) 2022-03-21 22:30:36 +00:00
Seth R. Johnson
075c76128a
numactl: add explicit darwin conflict (#29481) 2022-03-21 15:50:01 -06:00
Seth R. Johnson
226004b960
Add conflicts/updates for HEP tools on Summit (#29556)
* Fix bad `-mfma` flag on summit

* ROOT: new version and ppc conflict

See https://github.com/root-project/root/issues/9297
2022-03-21 15:43:01 -06:00
Thomas Madlener
3448a4642a
geant4-data: Add latest version to make it available for geant4 (#29462) 2022-03-21 15:14:43 -06:00
Joe Schoonover
dae656405f
hohqmesh: add v1.2.1 (#29454) 2022-03-21 20:24:48 +00:00
Valentin Volkl
3c0e422509
xapian-core: add v1.4.19 (#29583) 2022-03-21 14:02:57 -06:00
Valentin Volkl
b08f147cf3
edm4hep: add version 0.4.1 (#29542)
* edm4hep: add version 0.4.1

* style
2022-03-21 13:10:40 -06:00
Glenn Johnson
15dbc86177
r-insight: add v0.16.0 (#29617) 2022-03-21 11:53:21 -06:00
Glenn Johnson
2f3a31cef6
py-pyvcf: constrain py-setuptools to 0.57 (#29610)
This package can not use setuptools newer than 0.57 due to needing
features removed in later versions of setuptools.
2022-03-21 11:03:12 -06:00
Seth R. Johnson
fa554d763e
vecgeom: fix cuda arch (#29582)
* vecgeom: fix cuda arch

* vecgeom: change 'options' to 'args'

* vecgeom: add spec to locals

* vecgeom: suppress architecture specializations when cuda
2022-03-21 10:54:58 -06:00
Glenn Johnson
b4b8aaf3bc
r-sf: add v1.0.7 (#29625) 2022-03-21 10:47:01 -06:00
Valentin Volkl
c4b3b9ed9a
mariadb: add version 10.8.2 (#29586) 2022-03-21 10:41:45 -06:00
Glenn Johnson
674030ce62
r-yaml: add v2.3.5 (#29628) 2022-03-21 17:27:09 +01:00
haralmha
0b7eca36d1
lcgenv: add new package (#29436) 2022-03-21 17:03:20 +01:00
Felix Liu
3c1f87099b
Updated configure flags in newer versions of ipopt (#29445) 2022-03-21 17:01:13 +01:00
David M. Rogers
6d0b59b7ea
sparrow: add new package (#29291) 2022-03-21 16:59:11 +01:00
Greg Becker
dba7a03daa
config add: fix parsing of validator error to infer type from oneOf (#29475) 2022-03-21 16:55:02 +01:00
miheer vaidya
560abdc46d
Barvinok: fix pet variant description, add maintainer (#29421) 2022-03-21 16:53:44 +01:00
Glenn Johnson
9c2465173e
r-tinytex: add v0.37 (#29627) 2022-03-21 09:51:00 -06:00
Thomas Madlener
06a9496a39
geant4: Add external find support (#29642)
* geant4: Add external find support (partial)

* Fix style

* Fix style another time
2022-03-21 15:50:42 +00:00
Glenn Johnson
8fcfde62df
r-terra: add v1.5-21 (#29626) 2022-03-21 09:43:42 -06:00
dependabot[bot]
b65054881f
build(deps): bump docker/build-push-action from 2.9.0 to 2.10.0 (#29506)
Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 2.9.0 to 2.10.0.
- [Release notes](https://github.com/docker/build-push-action/releases)
- [Commits](7f9d37fa54...ac9327eae2)

---
updated-dependencies:
- dependency-name: docker/build-push-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-03-21 16:39:45 +01:00
Cameron Smith
6b6f67e90f
pumi: add v2.2.7 (#29521) 2022-03-21 16:36:23 +01:00
Larry Knox
e485d16c62
hdf5: add v1.13.1 (#29514)
Also add preferred=True to all "maintenance versions".
2022-03-21 16:23:41 +01:00
Harmen Stoppels
18f71aef1e
elfio: add v3.10 (#29644) 2022-03-21 08:27:08 -06:00
Glenn Johnson
ef0bc71035
r-recipes: add v0.2.0 (#29623)
Also add new package: r-hardhat.
2022-03-21 09:21:02 -05:00
Glenn Johnson
b4ab4ddc27
augustus: explicitly depend on ncurses (#29597) 2022-03-21 15:18:19 +01:00
Glenn Johnson
f2b123760c
bamtools: add missing dependency on jsoncpp (#29598) 2022-03-21 15:16:34 +01:00
Glenn Johnson
db5bd7134a
cistem: add missing dependency on libtiff (#29599) 2022-03-21 15:15:59 +01:00
Glenn Johnson
26a62a3258
cnvnator: tweak dependencies (#29600)
- constrain samtools to version 1.13
- replace lzma dependency with xz
- add missing dependencies for libdeflate and openssl
- explicitly set LD_FLAGS for dependencies in makefile
2022-03-21 15:15:27 +01:00
Glenn Johnson
732f1dd14d
gate: add v9.1 (#29601) 2022-03-21 15:14:54 +01:00
Glenn Johnson
e05f453531
gatetools: add v0.11.2 (#29602) 2022-03-21 15:14:20 +01:00
Glenn Johnson
d69e8dbace
relion: add dependency on libpng for version 4 (#29615) 2022-03-21 15:10:52 +01:00
Glenn Johnson
3ec27332ec
r-future: add v1.24.0 (#29616) 2022-03-21 15:09:51 +01:00
Glenn Johnson
311dc67536
r-jsonlite: add v1.8.0 (#29618) 2022-03-21 15:08:56 +01:00
Glenn Johnson
1b849aaa2c
r-philentropy: add v0.6.0 (#29619)
This also adds r-poorman as a new package.
2022-03-21 15:08:34 +01:00
Glenn Johnson
b67c7e593b
r-pillar: add v1.7.0 (#29620) 2022-03-21 15:08:08 +01:00
Glenn Johnson
daaac3e2f0
r-rcurl: add v1.98-1.6 (#29622) 2022-03-21 15:06:41 +01:00
haralmha
c7f9431e1b
crmc: new package (#29371) 2022-03-21 14:53:06 +01:00
haralmha
b0a712097a
ftjam: add new package (#29320) 2022-03-21 14:52:12 +01:00
Paul Kuberry
558e99ecca
xyce: switch to Trilinos 13.2.0 and add dependencies for +pymi (#29331)
* xyce: switch to Trilinos 13.2.0 and add dependencies for +pymi

* xyce: clean up Trilinos dependency logic
2022-03-21 14:26:41 +01:00
Adam J. Stewart
12ed453707
py-torchgeo: add v0.2.1 (#29632) 2022-03-21 14:24:15 +01:00
Jörg Behrmann
8fdc2ff462
python: add v3.10.3 (#29640)
From the release announcement: "This is a special bugfix release ahead of
schedule to address a memory leak that was happening on certain function calls
when using Cython. The memory leak consisted of a small constant amount of bytes
in certain function calls from Cython code. Although in most cases this was not
very noticeable, it was very impactful for long-running applications and certain
usage patterns. Check bpo-46347 for more information."
2022-03-21 13:18:52 +01:00
Harmen Stoppels
cf3cfab86c
libtree: add upperbound for elfio (#29637) 2022-03-21 12:59:15 +01:00
Harmen Stoppels
8f5b9a89fb
major.minor.micro.dev0 Spack version (#25267)
When you install Spack from a tarball, it will always show an exact
version for Spack itself, even when you don't download a tagged commit:

```
$ wget -q https://github.com/spack/spack/archive/refs/heads/develop.tar.gz
$ tar -xf develop.tar.gz
$ ./spack-develop/bin/spack --version
0.16.2
```

This PR sets the Spack version to `0.18.0.dev0` on develop, following [PEP440](https://github.com/spack/spack/pull/25267#issuecomment-896340234) as
suggested by Adam Stewart.

```
spack (fix/set-dev-version)$ spack --version
0.18.0.dev0 (git 0.17.1-1526-e270464ae0)
spack (fix/set-dev-version)$ mv .git .git_
spack $ spack --version
0.18.0.dev0
```

- [x] Update the release guide
- [x] Add __version__ to spack's __init__.py
- [x] Use PEP 440 canonical version strings
- [x] Make spack --version output [actual version] (git version)

Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
2022-03-20 22:37:55 -06:00
Harmen Stoppels
6d1da528f7
cmake: 3.21.x, 3.22.x bump (#29633) 2022-03-20 17:50:20 -06:00
Valentin Volkl
6611f0bf4b
rivet: fix dependency build types (#29358)
* rivet: fix dependency build types

If it isn't a python package, there is no good reason to change the default build type to remove link

* rivet: turn swig into build dependency
2022-03-20 14:18:12 -06:00
Luca Heltai
3d6156d3b2
dealii: new version and restrict sundials version (#29631) 2022-03-20 15:47:37 -04:00
Glenn Johnson
c6b69a8244
py-torch: set INTEL_MKL_DIR (#29613)
Add the INTEL_MKL_DIR variable so py-torch can find mkl if provided by
intel-oneapi-mkl.
2022-03-20 10:35:18 -05:00