Michael F. Herbst
a955f63530
Add bohrium to spack ( #6395 )
...
* Add bohrium package.py
* Changes suggested by @davydden
* Add +cuda guard
* Specify required environment setup
2017-11-23 07:24:55 -07:00
Eric
1dba6435bd
r-plotly: Create new package ( #6423 )
2017-11-23 07:17:17 -07:00
Denis Davydov
ddf10fa322
dealii: limit CMake to 3.9 as 3.10.0 is not supported yet ( #6427 )
2017-11-23 07:16:44 -07:00
sknigh
e2cf933ec1
gcc environment module will set CC, CXX, FC, F77, and F90 flags ( #3954 )
2017-11-23 12:44:55 +01:00
Cameron Smith
951679376e
zoltan: add optional dependency on parmetis ( #6387 )
2017-11-23 09:03:02 +01:00
Eric
6fd1009081
r-mixtools: Create new package ( #6421 )
2017-11-23 09:01:10 +01:00
Eric
bdd8bb1fd9
r-ranger: Create new package ( #6422 )
2017-11-23 09:00:32 +01:00
Chien-Chang Feng
630d7e19db
py-yt: Yt-project is moved. Add new version. ( #6409 )
2017-11-23 07:25:35 +01:00
Jon Rood
8b63cc6ad6
Using MPI environment compiler variables for pnetcdf. ( #6424 )
2017-11-22 21:34:21 -08:00
Massimiliano Culpo
0fc6611dc2
Changed every docs variant into doc as decided in #2663 ( #6412 )
...
fixes #2663
2017-11-22 15:06:59 +01:00
Sergey Kosukhin
d4ab511f73
Script for 'eccodes' is compatible with Python 3. ( #6402 )
2017-11-21 15:59:04 -07:00
Audrey Thoma
a0df5ae3e0
phantompeakqualtools: new package ( #6403 )
2017-11-21 15:58:20 -07:00
Eric
9e013ee036
r-pbapply: Create new package ( #6377 )
2017-11-21 13:45:12 -07:00
Eric
5a72d30816
r-ggjoy: Create new package ( #6399 )
2017-11-21 13:44:25 -07:00
Eric
60b50a7bd2
r-ica: Create new package ( #6400 )
2017-11-21 13:43:02 -07:00
Eric
d6a5310df5
r-cppprogress: Create new package ( #6398 )
2017-11-21 13:42:44 -07:00
Eric
d725904803
r-sdmtools: Create new package ( #6397 )
2017-11-21 13:42:28 -07:00
BenBrands
27b9d2614c
CMake: add 3.10.0 ( #6393 )
2017-11-21 08:04:53 -07:00
David Poliakoff
003f83db50
gotcha: new package ( #6391 )
...
* Initial stab at a package for Gotcha
* Commit with no boilerplate
* Flake8
2017-11-21 08:04:43 -07:00
Audrey Thoma
c4613b8e1f
mira: new package ( #6385 )
2017-11-21 08:04:08 -07:00
Michael F. Herbst
f0c0243cd4
Fix to allow installing pocl 0.14 again ( #6372 )
...
* Resolve issue 4669
* Use prefix path magic attribute
2017-11-21 08:03:36 -07:00
Yifan Zhu
5250c8eb0a
r-broom: new package ( #6282 )
2017-11-21 10:49:09 +01:00
Yifan Zhu
e3abc7bfa4
r-haven: created new package ( #6293 )
2017-11-21 09:54:43 +01:00
Yifan Zhu
b7189ecf9e
r-psych: created new package ( #6286 )
2017-11-21 09:40:10 +01:00
Yifan Zhu
ef8429c99c
r-modelr: created new package ( #6289 )
2017-11-21 09:26:44 +01:00
Eric
0743c5bde6
r-crosstalk: Create new package ( #6383 )
2017-11-20 21:52:58 -07:00
Eric
cd5e6a14bb
r-fnn: Create new package ( #6384 )
2017-11-20 21:52:39 -07:00
Audrey Thoma
8b2abfb28b
masurca: new package ( #6386 )
2017-11-20 21:51:35 -07:00
Eric
70ce7e2099
meme: add version 4.12.0 ( #6388 )
2017-11-20 21:50:46 -07:00
Eric
035cce2b81
py-biopython: add version 1.70 ( #6389 )
2017-11-20 21:50:25 -07:00
Eric
17e0b81463
r-ggridges: Create new package ( #6376 )
2017-11-20 14:18:16 -07:00
Eric
30b794254f
py-pysam: add version 0.13 ( #6382 )
2017-11-20 14:08:25 -07:00
BenBrands
93d5a91a56
dealii: fix HDF5 dependency ( #6374 )
2017-11-20 11:57:53 -07:00
BenBrands
83db25967e
Atlas: add 3.11.39 ( #6375 )
2017-11-20 11:57:34 -07:00
Eric
9040f34aba
r-tclust: Create new package ( #6380 )
2017-11-20 11:57:04 -07:00
Eric
1d69dbe7ae
r-diffusionmap: Create new package ( #6378 )
2017-11-20 11:56:47 -07:00
Eric
012acdc7a2
r-chemometrics: Create new package ( #6379 )
2017-11-20 11:56:33 -07:00
Denis Davydov
4e878c21cd
elpa: add 2017.05.002 and 2017.05.003 ( #5306 )
...
* elpa: add 2017.05.002 and 2017.05.03
* add a variant for optimization flags
2017-11-20 11:17:22 -07:00
Denis Davydov
34da07db9b
dealii: add cuda_arch variant via CudaPackage ( #6070 )
2017-11-19 12:39:13 -07:00
Adam J. Stewart
acbdf516f7
Add a new package for rlwrap ( #6371 )
2017-11-19 06:45:25 -07:00
lingnanyuan
cf3df2a321
r-dose: Create new package. ( #6355 )
2017-11-18 12:54:14 -07:00
Eric
20092adb94
r-vgam: Create new package ( #6363 )
2017-11-18 06:39:55 -07:00
Eric
618f4dff6d
r-bindrcpp: Create new package ( #6366 )
2017-11-18 06:36:39 -07:00
Eric
1c55a401b1
r-dtw: Create new package ( #6365 )
2017-11-18 06:35:47 -07:00
Eric
ebfc7bd7aa
r-som: Create new package ( #6364 )
2017-11-18 06:35:21 -07:00
Michael Kuron
e2fea1e1e6
siesta: new package ( #6346 )
...
* siesta: new package
* siesta: use libs instead of ld_flags everywhere
2017-11-17 19:01:15 -07:00
Stephen Hudson
b2f0306c6f
Mpi4py update ( #6342 )
2017-11-17 19:00:36 -07:00
Javier Cervantes
21da747a5d
hepmc: fix hash and urls, add new version 3.0.0 ( #6348 )
2017-11-17 18:59:52 -07:00
健美猫
8bc024d2d9
Add cluster.2017.5 and cluster.2018.1. ( #6349 )
2017-11-17 18:59:18 -07:00
lingnanyuan
9647038f27
r-rvcheck: Create new package. ( #6351 )
2017-11-17 18:59:00 -07:00
lingnanyuan
eda91bebd7
r-gosemsim: Create new package. ( #6352 )
2017-11-17 18:58:43 -07:00
lingnanyuan
d836d7e7ea
r-do-db: Create new package. ( #6353 )
2017-11-17 18:58:23 -07:00
lingnanyuan
c604638681
r-fgsea: Create new package. ( #6354 )
2017-11-17 18:58:01 -07:00
lingnanyuan
5c06255b24
r-clusterprofiler: Create new package. ( #6356 )
2017-11-17 18:57:40 -07:00
sknigh
1f8f593dd6
Added libhio 1.4.0.0 ( #6357 )
2017-11-17 18:57:17 -07:00
Brian Homerding
17debcb9b2
NuT: Add Installation of lib and demo app ( #6341 )
2017-11-16 16:30:42 -07:00
Matthias Vogelgesang
a62f8698c3
Add UFO and dependencies ( #6337 )
...
* Add json-glib
* Add ufo-core
* Add ufo-filters
2017-11-16 09:37:17 -08:00
healther
ef3c909701
add package py-numba ( #6323 )
...
* add package py-numba
* Update package.py
* Update package.py
* Update package.py
2017-11-16 10:13:20 -07:00
Audrey Thoma
e941f33eaf
meraculous: new package ( #6292 )
...
* meraculous: new package
* adding gcc version conflict
* Update package.py
* Update package.py
2017-11-16 09:40:46 -07:00
lingnanyuan
bb3d5fd313
r-rhdf5: Create new package. ( #6330 )
2017-11-16 09:40:15 -07:00
lingnanyuan
e732a554ff
r-shortread: Create new package. ( #6332 )
2017-11-16 09:30:18 -07:00
lingnanyuan
cca06422fa
r-sva: Create new package. ( #6333 )
2017-11-16 09:28:59 -07:00
David Hows
d89b09493c
Minor package fixes ( #6334 )
...
* Add no-implicit-fallthrough to MsgpackC
* Add 0.2.1 of Neovim
* Lint
2017-11-16 09:28:40 -07:00
Stephen Hudson
9d1224e5d8
py-petsc4py: Update version to 3.8.0 and add dependencies ( #5792 )
...
* py-petsc4py: Update version to 3.8.0 and add dependencies
- Added explicit dependency on python and numpy
* Kept old version - and corrected minimal python version
* Update to 3.8.1
2017-11-15 16:49:36 -07:00
baip
697f3ea71d
cp2k: add dependency on smm and libxc & new version 5.1 ( #6194 )
...
* cp2k: add libxsmm dependency
* cp2k: add libxc dependency
* cp2k: add smm variant to select from libxsmm or libsmm
* cp2k: add version 5.1
2017-11-15 16:49:08 -07:00
Christoph Junghans
7da8a02cbf
git grep --files-with-matches github.com/llnl/spack | xargs sed -i '/github.com/s@llnl/spack@spack/spack@' ( #6329 )
2017-11-15 16:46:39 -07:00
Denis Davydov
cb5fd6035a
intel: add 2018.1 ( #6322 )
2017-11-15 13:13:15 -07:00
Axel Huebl
d1a733bc86
xtensor, xtl, xsimd ( #6315 )
...
Adds the QuantStack libs (C++, header-only) needed for
xtensor.
2017-11-15 13:12:31 -07:00
Yifan Zhu
cde0570c56
r-janitor: created new package ( #6313 )
2017-11-15 13:09:24 -07:00
Yifan Zhu
0d9ab84ebb
r-dbplyr: created new package ( #6311 )
2017-11-15 13:09:11 -07:00
Howard Pritchard
af1b93b3db
Open MPI: add 2.0.4 release to package file ( #6310 )
...
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2017-11-15 13:03:07 -07:00
健美猫
71f12597a7
Update pgi to 17.10 . ( #6306 )
2017-11-15 13:02:54 -07:00
Sergey Kosukhin
e77b11674f
Update for 'magics' and 'libemos'. ( #6275 )
2017-11-15 13:01:23 -07:00
Benedikt Riedel
2eb7fabe62
Allow openblas to build on a VM ( #6258 )
...
This adds a "virtual_machine" boolean variant which adds build
options that enable building openblas on a VM.
2017-11-15 10:32:02 -08:00
Eric
9acf207023
picard: add versions and fix url format ( #6309 )
2017-11-14 16:41:27 -07:00
Michael Kuhn
ec5d366bcd
likwid: Fix hash for 4.3.0 ( #6307 )
...
Prefer 4.2.1 for now because 4.3.0's hash changes regularly.
2017-11-14 16:41:05 -07:00
健美猫
d9a4e7a038
Update miniconda to 4.3.30. ( #6233 )
2017-11-14 12:11:53 -08:00
Adam J. Stewart
138e9d08c6
Add the latest version of Lmod ( #6297 )
2017-11-14 10:32:41 -08:00
koebbe
50957bd44f
py-h5py: make sure to depend on the hl variant of hdf5 ( #6304 )
2017-11-14 09:26:58 -07:00
vishalkenchan
0692029273
update trilinos checksums ( #6301 )
2017-11-14 09:22:34 -07:00
Michael Kuhn
aa27432a1d
ncl: Check for ncl binary after installation ( #6298 )
...
ncl's build system will happily continue in case of errors, which might
result in the ncl binary not being built.
2017-11-14 09:22:04 -07:00
Michael Kuhn
e31b997162
icu4c: Update to 60.1 ( #6295 )
...
Previous versions try to include xlocale.h, which fails on glibc >= 2.26.
2017-11-14 09:21:35 -07:00
Yifan Zhu
a8f9182ef3
r-forcats: created new package ( #6291 )
2017-11-14 09:21:21 -07:00
Michael Kuhn
93bca2f3a2
libbson, libmongoc: Update to 1.8.1 ( #6290 )
2017-11-14 09:21:05 -07:00
Eric
137a9e64ac
trimgalore: add version 0.4.5 ( #6288 )
2017-11-14 09:20:20 -07:00
Yifan Zhu
392e25b7e6
r-mnormt: created new package ( #6287 )
2017-11-14 09:20:06 -07:00
Yifan Zhu
05eb287ed9
r-bindr: created new package ( #6285 )
2017-11-14 09:19:49 -07:00
Yifan Zhu
c042644b53
r-glue: created new package ( #6283 )
2017-11-13 16:25:52 -07:00
Douglas Duckworth
c7d2b4dbd6
relion 2.1 - update variant defaults ( #6201 )
...
Default precision should be double for CPU. Generally users also want
to use GPUs so the +cuda variant is now also enabled by default.
2017-11-13 12:29:43 -08:00
Christoph Junghans
bde727e187
mpibash: move to autotools ( #6253 )
2017-11-13 10:48:31 -07:00
Christoph Junghans
02335fa849
ucx: initial commit ( #6265 )
2017-11-13 10:47:58 -07:00
Eric
306aca812d
ont-albacore: add version 2.1.2 ( #6278 )
2017-11-13 10:47:40 -07:00
Satish Balay
6fd92e4257
petsc: update to version 3.8.2 ( #6244 )
...
Includes pkgconfig fix [for mfem static build failure]
2017-11-11 07:16:03 -07:00
Brian Homerding
19f8940c01
Nekbone: Installing data files for example runs ( #6243 )
...
* Nekbone: Installing data files for example runs
* Typo Fix
2017-11-10 19:59:33 -07:00
Sergey Kosukhin
263126bc5d
Create symlink for 'swig' binary after installation. ( #6240 )
2017-11-10 19:50:11 -07:00
Aaron Fisher
af06ea0e74
Fixed mfem mpi build issue. ( #6254 )
...
* Fixed mfem mpi build issue.
* Fixed a non-mpi build issue and switched to the latest official MFEM release.
2017-11-10 19:49:17 -07:00
Yifan Zhu
e38f31e773
feature/r-reprex: new package ( #6257 )
2017-11-10 19:47:21 -07:00
Cyrus Harrison
b079e1dbd5
add alpine ascent ( #6224 )
...
* add ascent package and and deps
* proper use of site_packages_dir prop
* flake8
* add maitain, small updates
* flake8
* flake8
* fixs for docstrings for sphinx
2017-11-10 17:00:47 -08:00
becker33
917d021997
Add version 1.04 ( #6259 )
2017-11-10 15:52:48 -08:00
becker33
a7b817b494
elfutils: add --no-as-needed flag for library ordering issue ( #6256 )
...
* add --no-as-needed flag for library ordering issue libelf
* fix syntax error.
2017-11-10 11:42:37 -08:00
