Commit graph

26473 commits

Author SHA1 Message Date
Adam J. Stewart
967463432b
py-shapely: env vars always needed (#31217) 2022-06-21 18:11:36 -07:00
Howard Pritchard
bc03b5caaf
meson: fix to recognize intel oneapi compiler (#30605)
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2022-06-21 10:47:46 -07:00
Massimiliano Culpo
649760dc1a
Canonicalize positional argument to spack bootstrap mirror (#31180)
fixes #31139
2022-06-21 19:25:01 +02:00
Adam J. Stewart
77118427b1
grep: add +pcre variant (#31204) 2022-06-21 10:06:42 -07:00
haralmha
1a024963a2
frontier-client: Add openssl and zlib directories to search path (#31212) 2022-06-21 09:38:24 -07:00
Massimiliano Culpo
aebb601b70
Stricter compatibility rules for OS and compiler when reusing specs (#31170)
* Stricter compatibility rules for OS and compiler when reusing specs
* Add unit test
2022-06-20 17:32:13 -07:00
Robert Cohn
d95f53e1ac
New (external-only) package: oneapi-igc (#31045) 2022-06-20 13:38:41 -07:00
Christian Goll
0fe57962b3
OpenSUSE Tumbleweed: use GLIBC version as distro version (#19895)
Tumbleweed is a rolling release that would have used a date 
as a version instead.
2022-06-20 22:20:31 +02:00
Massimiliano Culpo
8ec451aa7d
setuptools: add v62.4.0 (#31112) 2022-06-20 08:59:58 -07:00
Stephen Sachs
14349cb882
lammps: add lammps_sizes variant (#31182)
This is translated to CMakes LAMMS_SIZES variable. Used to select integer sizes.

Co-authored-by: Stephen Sachs <stesachs@amazon.com>
2022-06-20 09:39:03 +00:00
Pariksheet Nanda
bc438ed4e9
ome-files-cpp: add v0.6.0 (#31156) 2022-06-20 10:16:21 +02:00
Sam Broderick
760a12c440
Fix request for bzip2, since bzip was pulled due to patent issues (#31198) 2022-06-20 08:13:20 +00:00
Adam J. Stewart
9325c8e53f
py-tensorboard-data-server: fix build on Apple M1 (#30908) 2022-06-20 10:12:32 +02:00
HELICS-bot
fd5b7d6cce
helics: add v3.2.1 (#31190)
Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
2022-06-20 09:54:57 +02:00
Cory Bloor
b19a0744f1
rocm: add master and develop to BLAS and SOLVER (#30273) 2022-06-20 09:52:47 +02:00
Sebastian Ehlert
75d0c0dff7
fpm: add v0.6.0 (#31193) 2022-06-20 09:49:21 +02:00
Adam J. Stewart
aedc41c3a0
texlive: fix and deprecate live version (#31195) 2022-06-20 09:44:36 +02:00
Valentin Churavy
1f39d6d916
Julia: add v1.7.3 (#31196) 2022-06-20 09:41:50 +02:00
Ye Luo
1bc3b0a926
quantum-espresso: Add 7.1 (#31192) 2022-06-18 23:32:28 +02:00
Ryan Marcellino
62596fb796
py-f90wrap: new version (#31174) 2022-06-17 17:09:34 -06:00
Brian Van Essen
15c35a3cff
Bugfix external find --all for libraries (#31186)
* Fixed a bug in the 'external find --all' command where the call failed
to find packages by both executable and library. The bug was that the
call `path.all_packages()` incorrectly turned the variable
`packages_to_check` into a generator rather than keeping it a list.
Thus the second call to `detection.by_library` had no work to do.

* Fixed the help message for the find external and compiler commands as
well as others that used the `scopes_metavar` field to define where
the results should be stored in configuration space.  Specifically,
the fact that configuration could be added to the environment was not
mentioned in the help message.
2022-06-17 21:52:06 +00:00
Brian Van Essen
249c90f909
Added the ecp and radiuss tags to the LBANN software stack packages. (#31188) 2022-06-17 21:25:50 +00:00
Kyle Gerheiser
043b2cbb7c
Fix external compiler detection for MPICH and OpenMPI (#30875)
os.path.dirname was being used to compare compilers. If two compilers
are in the same directory then it will pick up the first one it encounters.

Compare the full compiler path instead.
2022-06-17 14:01:49 -06:00
Bernhard Kaindl
aedf215b90
openssh: don't suid-install ssh-keysign (not used by default) (#31083) 2022-06-17 12:09:52 -06:00
Mikhail Titov
eed4a63be7
rct: update packages (RE, RG, RP, RS, RU) with new versions (#31172) 2022-06-17 10:44:22 -07:00
Massimiliano Culpo
13b609b4b6
docs: quote string to show valid YAML (#31178)
fixes #31167
2022-06-17 18:25:52 +02:00
Chuck Atkins
85dc20cb55
Spec: Add a new virtual-customizable home attribute (#30917)
* Spec: Add a new virtual-customizable home attribute

* java: Use the new builtin home attribute

* python: Use the new builtin home attribute
2022-06-17 10:29:08 -04:00
Massimiliano Culpo
667c39987c
py-setuptools: install setuptools from wheels directly (#31131)
When installing setuptools from sources in Spack, we might
get into weird failures due to the way we use pip.

In particular, for Spack it's necessary to install in a
non-isolated pip environment to allow using PYTHONPATH as a
selection method for all the build requirements of a
Python package.

This can fail when installing setuptools since there might
be a setuptools version already installed for the Python
interpreter being used, with different entry points than
the one we want to install.

Installing from wheels both pip and setuptools should
harden our installation procedure in the context of:
- Bootstrapping Python dependencies of Spack
- Using external Python packages
2022-06-17 10:42:28 +02:00
Cyrus Harrison
f35d8c4102
vtk-h: use cmake base pkg, overhaul recipe (#28898)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-06-17 09:59:57 +02:00
Sreenivasa Murthy Kolam
6ac3186132
Support 'spack external find' for rocm packages (#30792) 2022-06-17 09:34:49 +02:00
Robert Cohn
466572dc14
Update Intel package descriptions (#31150) 2022-06-17 09:23:40 +02:00
Harmen Stoppels
1c0bf12e5b
openssl package: default to mozilla certs (#31164)
On Cray systems that use Cray Data Virtualization Service (DVS),
symlinks across filesystems are not allowed, either due to a bug, or
because they're simply not POSIX compliant [1].

Spack's OpenSSL package defaults to `certs=system` which comes down to
symlinking `/etc/ssl` in the Spack install prefix, triggering this
problem, resulting in mysterious installation failures.

Instead of relying on system certs, we can just use
`ca-certificates-mozilla`, and if users really need system certs, then
they're probably better off marking OpenSSL entirely as external.

[1] https://github.com/glennklockwood/cray-dvs
2022-06-16 23:25:32 -06:00
Adam J. Stewart
bf990bc8ec
py-sphinx: add v5, maintainer (#31171) 2022-06-16 20:41:31 -06:00
Massimiliano Culpo
267358a799
ASP-based solver: fix rules on version weights selection (#31153)
* ASP: sort and deduplicate version weights from installed specs

* Pick version weights according to provenance

* Add unit test
2022-06-16 14:17:40 -07:00
Peter Scheibel
392b548312
Manifest parsing: avoid irrelevant files (#31144)
* Manifest directory may not contain manifest files: exclude non-manifest files
* Manifest files use different name for rocmcc: add translation for it
2022-06-16 15:16:48 -05:00
Elizabeth Sherrock
8c3b82c140
New packages: py-ford and dependencies (#31107)
* Created package and added description

* Add py-markdown-include

* Created package

* Finished creating package

* Added py-md-environ

* Added build dependencies

* Added other deps

* Add python-markdown-math (#4)

* Created package and started to add info

* Removed unneeded global/install options

* Figured out version spec for markdown-math

* Removed type=build from unnecessary dependencies

* Removed unneeded install/global options, added version spec to dependency

* Added wscullin as interim maintainer for packages

* Fixed style issues

* Took care of trailing whitespace

* Removed comment line before imports

* Changed file charset to match other packages

* Update var/spack/repos/builtin/packages/py-ford/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/py-ford/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Removed test dependency after review feedback

* Added new 6.1.12 version to py-ford

Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-06-16 12:14:40 -07:00
Qian Jianhua
2e4b533420
rpcsvc-proto: add 'cpp' path for rpcgen (#31157) 2022-06-16 18:24:28 +00:00
Mark Abraham
3b393fe0eb
Add LevelZero variant to hwloc package (#31161)
* Add LevelZero variant to hwloc package

This permits the hwloc package to build with with support for the
Intel Level Zero low-level layer, analogous to CUDA, ROCm, and OpenCL.

* Fix typo
2022-06-16 12:21:36 -06:00
Massimiliano Culpo
895ceeda38
concretize.lp: impose a lower bound on the number of version facts if a solution exists (#31142)
* concretize.lp: impose a lower bound on the number of version facts if a valid version exists

fixes #30864

* Add a unit test
2022-06-16 09:25:56 -07:00
Satish Balay
6f1e3a4ad3
xsdk-examples: use 'parallel=False' with tests - as they may fail with a large '-j'[when used with +cuda] (#31138) 2022-06-16 07:50:45 -07:00
iarspider
ce41b7457b
Xerces-C: Add option to disable transcoder (#31162)
* Xerces-C: Add option to disable transcoder

* Update package.py

* Apply suggestion from review

* Flake-8
2022-06-16 10:40:03 -04:00
G-Ragghianti
4f9f56630b
slate, blaspp, lapackpp: new versions (#31147)
* Adding new release for slate, blaspp, and lapackpp

* Setting release tar file hashes

* New slate release
2022-06-16 08:09:42 -04:00
Rob Falgout
e216ba1520
hypre: new version 2.25.0 (#31146) 2022-06-16 08:07:30 -04:00
Massimiliano Culpo
4fd5ee1d9d
CI: test binary bootstrapping of clingo on all macOS versions (#31160) 2022-06-16 07:26:20 -04:00
Mosè Giordano
89f32d51f3
grid: add new package (#31133) 2022-06-16 09:00:09 +02:00
Manuela Kuhn
3b3be70226
r-httpuv: fix zlib dependency (#31121) 2022-06-15 20:22:58 -05:00
Chuck Atkins
95888602f2
mesa: Match rtti settings with the libllvm dependency (#31145)
* llvm-amdgpu: Update the libllvm version provided

* mesa: Match configure rtti settings to the libllvm dependency
2022-06-15 17:29:33 -06:00
Wileam Y. Phan
0205fefe0c
googletest: use URLs with .tar.gz extension (#31129) 2022-06-15 18:21:44 +00:00
Tom Scogland
b261b2a5ff
Allow bootstrapping to work when partial or incompatible modules exist in the module path (#31035) 2022-06-15 19:09:07 +02:00
Ryan Mast
8c58c14c3d
helics: add v2.8.1 (#31134) 2022-06-15 09:27:50 +02:00