Commit graph

25061 commits

Author SHA1 Message Date
Robert Romero
811abf5d00
HiCOPS: add new package (#26767)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2022-03-09 09:47:04 +01:00
iarspider
37e14ee1ac
sigcpp: add new package (#29341) 2022-03-09 09:41:13 +01:00
Jon Rood
68f0973339
hypre: add rocm support (#29147)
Co-authored-by: Sarah Osborn <30503782+osborn9@users.noreply.github.com>
2022-03-09 09:39:59 +01:00
Wouter Deconinck
9d1d52d51f
geant4: new version 11.0.1 (#29411) 2022-03-09 09:32:35 +01:00
haralmha
27e3b34d6d
qmtest: add new package (#29377) 2022-03-09 09:28:27 +01:00
kentaw77
c523e22575
zpares: add new package (#29278) 2022-03-09 09:25:22 +01:00
Mosè Giordano
5064ad6cad
libblastrampoline: add v5.0.2 (#29407) 2022-03-09 09:19:23 +01:00
Brian Van Essen
990a620d52
rdkit: added new versions up to 1021_09_05 (#29415) 2022-03-09 09:02:59 +01:00
haralmha
a9996db35c
py-control: add new package (#29386)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-03-08 13:22:40 -07:00
haralmha
ddc5b4422d
py-param: add new package (#29384)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-03-08 12:58:46 -07:00
Keita Teranishi
b2a02861bb
trilinos: new variant for the Panzer package (#29256)
* Adding Panzer as Default

* Set Panzer as non-default

* Updated the conflict for Panzer.

* Updated the conflict for Panzer.

* Resolve the issue with Stratimikos and Thyra

* Fixing stk build issues.

* Fixing stk build issues.

* Adding another conflict for Thrya
2022-03-08 12:14:40 -07:00
Wouter Deconinck
1df9c3437f
hztool: new package (dependency of sherpa #29338) (#29365) 2022-03-08 19:58:29 +01:00
SXS Bot
9cc6bc26a2
spectre: add v2022.03.07 (#29378)
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2022-03-08 19:36:00 +01:00
Tiziano Müller
94ce7f5040
cray-libsci/cp2k: add constraints to get consistently linked executables (#29396)
* cray-libsci: only be a provider for scalapack with +mpi

If a package explicitly links the scalapack provider we might otherwise end up with different variants of libsci being linked: the explicitly linked one and the one added by the Cray compiler wrappers.

* cp2k: require cray-libsci+openmp with +openmp for consistency

otherwise we might get 2 different libsci linked: one explicitly, the other one via the Cray compiler wrappers, leading at least to segfaults during cleanup

* cp2k: depend on cray-fftw+openmp with +openmp
2022-03-08 19:32:15 +01:00
Seth R. Johnson
5bea24526f
Fix overconstrained HDF5 variants (#29132)
* hdf5: mark +fortran+shared conflict for older version

This version was only activated unintentionally by silo's conflict
statement, but `@1.8.15+shared+fortran+cxx` errors out in configure:

```
CMake Error at CMakeLists.txt:814 (message):
   **** Shared FORTRAN libraries are unsupported ****
```

* silo: refine hdf5 conflicts to avoid building old version

Before this, `silo+hdf5` concretized to 1.10.7 or sometimes 1.8.15. Now
I've verified it works for the following configurations:
```
silo@4.10.2 patches=7b5a1dc,952d3c9
^   hdf5@1.10.7 api=default

silo@4.10.2 patches=7b5a1dc,952d3c9,eb2a3a0
^   hdf5@1.10.8 api=v18

silo@4.10.2 patches=7b5a1dc,952d3c9,eb2a3a0
^   hdf5@1.12.1 api=v110

silo@4.11-bsd patches=eb2a3a0
^   hdf5@1.12.1 api=v110

silo@4.11-bsd patches=eb2a3a0
^   hdf5@1.10.8 api=default

silo@4.11-bsd patches=eb2a3a0
^   hdf5@1.12.1 api=default
```

and verified that the following fail:
```
silo@4.10.2 ^hdf5@1.12.1 api=default
silo@4.11 ^hdf5 api=v18
silo@4.11-bsd ^hdf5@1.13.0 api=v12
silo@4.11-bsd ^hdf5@1.13.0 api=default
```

and have updated the constraints to match. Hdf5 no longer has to be
downgraded to work with Silo.

* silo: fix dependency conflicts

* py-h5py: shorten and add comments to py-h5py hdf5 dependencies

* e4s: remove slightly outdated hdf5 requirement

* e4s: remove excessive hdf5 variant constraints

These I think are holdovers from the old concretizer.

- `hdf5_compat` can be expressed as `+hdf5 ^hdf5@1.8`
- The extra variants on hdf5 shouldn't break conduit
- axom unnecessarily restricts hdf5 version

* conduit: restore hdf5_compat flag
2022-03-08 13:15:10 -05:00
Tanner Hobson
57b27023a4
sensei: add v3.2.2 (#29388) 2022-03-08 11:14:41 -07:00
Seth R. Johnson
ceb260927b
git-lfs and go: add new versions (#29121)
* go: new version 1.17.7

* git-lfs: new versions 2.12,2.13,3.1
2022-03-08 19:06:57 +01:00
Glenn Johnson
1c362ccb11
gurobi: add v9.5.1 and fix build (#29225)
This package can not be install with pip, it uses distutils
2022-03-08 19:00:58 +01:00
haralmha
2c2eb911e1
vectorclass-version2: add new package (#29400) 2022-03-08 18:41:08 +01:00
Axel Huebl
d1e0266952
rocm-smi: project moved (deprecate) (#28733)
According to its README, this project moved.

References:
- https://github.com/RadeonOpenCompute/ROC-smi#rocm-system-management-interface
- https://github.com/RadeonOpenCompute/rocm_smi_lib/tree/master/python_smi_tools
2022-03-08 18:31:20 +01:00
Richarda Butler
8986c21d73
bolt: fix standalone test (#29389) 2022-03-08 18:25:13 +01:00
Chris White
64532902f9
blt: add v0.5.0 (#29393) 2022-03-08 18:20:53 +01:00
haralmha
568a535e3f
apfel: depend on python also for ~python variant (#29395) 2022-03-08 17:10:56 +01:00
Nils Vu
cd5e7579be
spectre: add docs dependencies, BUILD_DOCS toggle (#29399)
New versions don't try to configure docs targets at all when the
BUILD_DOCS option is turned off. This avoids CMake warnings
when docs dependencies are not found.
2022-03-08 16:51:05 +01:00
Mikael Simberg
b559b99c8f
Add pika 0.2.0 (#29398)
* Add pika 0.2.0
* Add apex variant to pika
2022-03-08 04:46:47 -07:00
Harmen Stoppels
a39a6c4ea7
version.py: set is_commit in constructor (#29369)
Speeds up comparison on `Version` by ~2.5x, e.g.

```python
In [1]: v = spack.version.Version('1.0.0'); w = spack.version.Version('1.0.2')

In [2]: %timeit v < w

1.47 µs ± 5.59 ns per loop (mean ± std. dev. of 7 runs, 1000000 loops each)

535 ns ± 1.75 ns per loop (mean ± std. dev. of 7 runs, 1000000 loops each)
```
2022-03-08 10:50:48 +01:00
Harmen Stoppels
4b5e071141
Add libtree 3.1.0 (#29356) 2022-03-08 10:18:47 +01:00
eugeneswalker
2a64c6a402
rocsolver depends on fmt@7:8.0.1 (#29391) 2022-03-07 18:58:42 -07:00
Qian Jianhua
aea10bf876
landsfcutil: support Fujitsu compiler (#29367) 2022-03-07 17:18:23 -08:00
Qian Jianhua
2088d407a2
sigio: support Fujitsu compiler (#29366) 2022-03-07 17:17:44 -08:00
Qian Jianhua
cc14384818
sfcio: support Fujitsu compiler (#29364) 2022-03-07 17:15:08 -08:00
Dom Heinzeller
3d29e0d641
Bug fixes for ESMF on macOS with apple-clang+gfortran, with gfortran-10+ in general, and on Cray (#29193)
* Bugfix in var/spack/repos/builtin/packages/esmf/package.py

* Bug fixes in var/spack/repos/builtin/packages/esmf/package.py to build ESMF on macOS with clang+gfortran and on cray

* Add maintainer to var/spack/repos/builtin/packages/esmf/package.py

* Fix style errors

* Fix more style errors
2022-03-07 11:58:39 -07:00
Valentin Volkl
ad2b493171
libzmq: default to ~docs (#29372) 2022-03-07 10:54:31 -07:00
Valentin Volkl
5bbcb43ad3
py-jupytext: add version 0.13.6 (#28688)
* py-jupytext: add version 0.13.6

From da3fcc305d:

markdown-it-py v2.0 implements some internal changes, but won't affect jupytext

* py-jupytext: keep mdit-py version restricted to 1

* py-jupytext: update dependencies

* Apply suggestions from code review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Apply suggestions from code review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-03-07 11:17:34 -06:00
Aurelien Bouteiller
fe8548853d
PaRSEC: moved repository to GitHub, now require cmake 3.18 (#29346)
Signed-off-by: Aurelien Bouteiller <bouteill@icl.utk.edu>
2022-03-07 09:05:14 -08:00
Pieter Ghysels
4a17099cc3
Strumpack v6.3.1 (#29353)
* Add STRUMPACK version 6.3.1

* Add STRUMPACK version 6.3.1 (in URL)
2022-03-07 09:04:32 -08:00
Valentin Volkl
822b763222
man-db: add gitlab repository, new version 2.10.1 (fixes MAXDIRS issue) (#29359)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2022-03-07 08:22:52 -07:00
Valentin Volkl
28aa1a64d4
groff: default to ~pdf (#29373) 2022-03-07 08:02:49 -07:00
Valentin Volkl
e3ab326228
mesa, mesa18: default to ~llvm (#29360) 2022-03-07 09:59:20 -05:00
haralmha
6934703ffb
Add checksum for relax@root6 (#29314) 2022-03-07 10:54:45 +01:00
Valentin Volkl
53fb5963eb
starlight: add new package (#29158) 2022-03-07 02:30:13 -07:00
liuyangzhuan
022aa496a5
butterflypack: add v2.1.1 (#29343) 2022-03-07 08:50:32 +01:00
Todd Gamblin
d424d0e54e
find: deprecate spack find -bootstrap for spack -bootstrap find (#29152)
Since adding the `spack --bootstrap` argument we don't need `spack find --bootstrap`
anymore.  Deprecate it.
2022-03-05 21:41:18 -08:00
Greg Sjaardema
762893d4a6
seacas: new version with new dependency on fmt (#29348)
Removed the internal copies of lib::fmt and modified to have a dependency on lib::fmt instead.  Requires fmt-8.1.0 or later
2022-03-05 15:11:18 -05:00
Vivian Hafener
addf6f2686
New package: py-ml-collections (#29325) 2022-03-05 14:03:41 -06:00
Vivian Hafener
ce4b812b52
Rebased upon upstream (#29337) 2022-03-05 14:03:03 -06:00
Greg Sjaardema
afaaf04fa9
fmt: add 8.1.0 and 8.1.1 (#29347) 2022-03-05 02:50:53 +01:00
Jen Herting
9f49461183
New package: py-priority (#29139)
* [py-priority] created template

* [py-priority]

- added homepage
- added description
- added dependencies
- removed fixmes
2022-03-04 15:26:30 -07:00
Asher Mancinelli
4081597731
hiop: add version v0.5.4 (#29301)
* Add HiOp v0.5.4, update magma constraint

* Add v2.6.2rc1 to magma, make hiop depend on it

* Update var/spack/repos/builtin/packages/hiop/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-03-04 13:52:23 -06:00
Paul R. C. Kent
d42e5421dc
New versions: qmcpack@3.12.0, 3.13.0 (#29345) 2022-03-04 11:19:34 -08:00