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1550 commits

Author SHA1 Message Date
Todd Gamblin
0bbbfc2ef7 Merge pull request #946 from LLNL/features/intel2 
Intel software packages and license enhancements
 2016-06-17 14:28:39 -07:00
Tom Scogland
8770f2a0ea fixing last flake8 issue 2016-06-17 13:42:27 -07:00
Tom Scogland
0743ef4d0b fixing flake8 issues 2016-06-17 13:32:28 -07:00
Tom Scogland
a4ac99877a cmd/list: adding description search and glob by default 2016-06-17 12:00:35 -07:00
Mario Melara
fe5eec5230 'find and 'add' are options for adding compilers via command line 2016-06-17 09:16:03 -07:00
Mario Melara
df84fe0b58 Added init_config parameter so we don't initialize the config when user runs spack compiler add. Should ONLY add what user specifies. Find compilers takes in paths parameter. 2016-06-16 18:10:38 -07:00
Todd Gamblin
005827ab23 Replace 2.6-incompatible skipIf with a conditional. 
- skipIf doesn't work with Python 2.6.
 2016-06-16 12:12:29 -07:00
Todd Gamblin
f60ae61652 remove dead code, cleanup. 2016-06-16 10:44:15 -07:00
Todd Gamblin
8867adf942 simplify instance check. 2016-06-16 10:43:36 -07:00
Todd Gamblin
c7dfa1699a rename Mac OS X to macos 2016-06-16 10:43:12 -07:00
Mario Melara
6b03770602 Added str method to mac_osx so that whenever we try to access darwins different operating systems we can grab the name correctly. This avoids having to worry whether we have a version attached to it or not. 2016-06-16 09:44:37 -07:00
Todd Gamblin
88b73bacdb Merge branch 'features/newarch' into develop 
Conflicts:
	lib/spack/spack/config.py
	var/spack/repos/builtin/packages/lua/package.py
 2016-06-16 03:03:26 -07:00
Todd Gamblin
17b868381f Fixes #460: Do not show variants by default in spack find. 
This does two things:

1. By default `spack find` no longer shows variants.  You have to
   supply `-v` to get that

2. This improves the `colify` implementation so that it no longer pads
   the rightmost column.  This avoids the issue where if one spec was
   too long in the output, *all* specs would have space padding added
   to that width, and it would look like the output of `spack find`
   was double spaced.  This no longer happens -- the one bad line
   wraps around and the other lines are now single-spaced when you use
   `-v` with boost.
 2016-06-16 02:55:33 -07:00
Todd Gamblin
88b671f8b1 Just call old os "unknown" 2016-06-16 02:06:19 -07:00
Todd Gamblin
f3d6818d5c be more tolerant when parsing new specs. 2016-06-16 00:55:39 -07:00
Todd Gamblin
c90cc465f5 Add __contains__ to arch to satsify old packages. 2016-06-16 00:54:59 -07:00
Gregory L. Lee
d4df4375d5 removed unused import per flake8 report 2016-06-15 20:32:08 -07:00
Gregory L. Lee
1724ff5658 do not create shebang.bak file 2016-06-15 20:21:02 -07:00
Gregory Becker
3fcd54203c two minor fixes 2016-06-15 16:44:38 -07:00
Gregory Becker
2fc9ac4036 Two minor fixes 2016-06-15 16:39:39 -07:00
Ben Boeckel
716f12dd58 reindex: preserve 'explicit' flags 
Look up in the old database whether the spec was explicit or not and
preserve it into the new database.

Fixes #1050.
 2016-06-15 12:48:40 -04:00
Denis Davydov
3d3a26cd9a flake8 fixes for filesystem.py 2016-06-15 18:31:10 +02:00
Ben Boeckel
36decbfa69 tty: do not break long words 
These "words" tend to be file paths which are best left unbroken.

Fixes #1057.
 2016-06-15 12:22:35 -04:00
Denis Davydov
a860a3d614 superlu-dist: avoid harcoding blas/lapack/mpi; remove preferred version 2016-06-15 18:21:13 +02:00
Massimiliano Culpo
30c9d976f6 environment : added more logic to treat append and prepend path 2016-06-12 18:54:56 +02:00
alalazo
5300ffac7f qa : fixed flak8 checks 2016-06-12 15:11:26 +02:00
alalazo
a6681f2d7f environment modules : added function to construct them from source files 2016-06-12 15:06:17 +02:00
alalazo
3737169450 qa : fixed style and a bug reported by flake8 
lib/spack/spack/test/versions.py:313: [F811] redefinition of unused 'test_union_with_containment' from line 306
Flake8 found errors.
 2016-06-11 12:57:46 +02:00
alalazo
eb9b00b210 versions : added unit tests for the new properties 2016-06-11 12:44:21 +02:00
Gregory Becker
0fea167f97 I made a hash of that minor merge 
Merge commit '4eeb' into features/newarch
 2016-06-10 16:28:09 -07:00
Gregory Becker
992bcac794 changed compiler yaml format 2016-06-10 16:26:02 -07:00
Erik Schnetter
2a4d440003 Add quotes around file name 
$input_log will expand to file names with special characters (e.g. "@"), thus bash requires quotes.
 2016-06-08 19:14:01 -04:00
alalazo
564483936f qa : fixed flake8 issues 2016-06-08 16:33:49 +02:00
alalazo
f4a39457de lmod : updated package and dependencies 2016-06-08 15:35:15 +02:00
Mario Melara
5715799d4e Added to_dict back into operating system 2016-06-07 14:15:28 -07:00
Mario Melara
4925be0bc4 Load external modules 2016-06-07 13:22:47 -07:00
Mario Melara
196737c217 Changed to passing full architecture spec to function rather than just platform_os so we can grab the operating system from the platform getters 2016-06-06 10:29:19 -07:00
Mario Melara
835982faed Changed OS name to CNL10 so that we properly find the compilers for the test platform 2016-06-06 09:08:59 -07:00
Mario Melara
864191b6ed Got rid of unnecessary global keyword 2016-06-06 09:06:58 -07:00
Mario Melara
5b023bb0a1 Passing through full arch instead of just operating sysystem so that we can use the platform to get the operating system 2016-06-06 09:05:14 -07:00
Mario Melara
c7b48f6fef Passing full arch for proper compiler spec so that we can use the platform to get the operating system 2016-06-06 09:04:24 -07:00
Mario Melara
f751d68177 Passing architecture to functions to find compiler. We can use the platform name if provided to find the operating system. Also changed error to operating system instead of target since operating system is now in charge of compiler finding. 2016-06-06 09:03:32 -07:00
Tom Scogland
30e8e77fb6 Merge pull request #869 from brettviren/feature/views 
Feature/views
 2016-06-05 11:31:48 -07:00
Mario Melara
30c204a0a5 Made a merge commit earlier with Todd fixing all_platforms, but changed how architecture looks in spec.yaml. Just three strings. Also made some flake8 formatting changes 2016-06-03 16:16:59 -07:00
Mario Melara
bc557cc765 Merge branch 'features/newarch' of https://github.com/NERSC/spack into features/newarch 2016-06-03 15:59:00 -07:00
Mario Melara
24d160e93e Changed how architecture looks like in spec.yaml. Now it's only three strings, platform, os, target in spec.yaml. Also did some flake8 formatting changes 2016-06-03 15:57:54 -07:00
Todd Gamblin
9d04dccb79 Update version to correspond to master. 2016-06-02 01:20:40 -07:00
Gregory Becker
817f43f927 Fixed config format to allow default compiler flags 2016-05-31 13:39:25 -07:00
Todd Gamblin
7bdf63a0fa Fix some bugs in architecture. 2016-05-31 03:01:05 -07:00
Todd Gamblin
24ee32d7b0 More flexible reading of specs from DB, formatting. 2016-05-30 22:02:22 -07:00
Todd Gamblin
f3f0122f11 Merge branch 'develop' into features/newarch 2016-05-30 13:54:53 -07:00
Mario Melara
b14ba31250 Quick fix for mock compilers.yaml to work on linux machines. 2016-05-30 13:22:08 -07:00
Mario Melara
716991775d Added extra check on linux machines, since most linux machines don't have module system 2016-05-30 13:09:41 -07:00
Mario Melara
08a9d80ebc Changed platform to py_platform to avoid name collisions. The naming collisions resulted in an error on linux machines 2016-05-30 13:07:20 -07:00
Mario Melara
f96c979024 Added a conditional to check if package is external 2016-05-30 13:05:49 -07:00
Todd Gamblin
e8b4d5fb6f Performance boost: reduce instantiations of re.Scanner 
- Lexer is the same for every Spec parser in spack, so don't build it
  every time.

- This improves time to import package.py files a lot, as a Lexer
  doesn't have to be constructed for every spc in the packages.

- To concretize dealii:
  - Before: ~20 sec
  - After:  ~6 sec
 2016-05-28 23:05:23 -07:00
Mario Melara
22ca72e7b9 Added conditional skipIf to test_external_modules, darwin machines don't have tcl modules so skip this test and let user know why 2016-05-28 12:40:29 -07:00
Mario Melara
69585cb6e3 Added elcap compilers 2016-05-28 12:39:43 -07:00
Mario Melara
f0a9c45207 Adding external to mock config 2016-05-28 10:13:57 -07:00
Mario Melara
98a4a9f2cc Adding test for external modules 2016-05-28 10:13:22 -07:00
Mario Melara
becec8ac7e Added external module check in normalize to avoid infinite loop 2016-05-28 10:12:53 -07:00
Gregory Becker
9dad7c2ace re-merged mainline develop 2016-05-27 13:13:19 -07:00
Gregory Becker
f49644cdea Fixed typo in linux platform 2016-05-27 12:37:58 -07:00
Gregory Becker
023504ed64 Fixed the external modules bug 2016-05-27 12:26:59 -07:00
Todd Gamblin
285646bbfa Merge pull request #981 from epfl-scitas/tests/unit_test_for_968 
find : add unit tests
 2016-05-27 11:00:45 -05:00
Todd Gamblin
2f18a34458 Merge pull request #989 from LLNL/features/cflags-documentation 
updated documentation for cflags PR
 2016-05-27 10:59:40 -05:00
Gregory Becker
a2f90453f4 Fixed backwards compatibility for compilers.yaml config file 2016-05-26 20:30:05 -07:00
Mario Melara
9c1da4fa4c Corrected parantheses wrapping 2016-05-26 13:58:17 -07:00
Gregory Becker
189e8b3f34 fixed compiler config init logic 2016-05-26 13:17:01 -07:00
Gregory Becker
88bec814eb Allow 'arch=' syntax for specs to allow copying from output 2016-05-26 12:10:41 -07:00
Gregory Becker
c0661744cc fixed compatibility work 2016-05-26 11:38:40 -07:00
Gregory Becker
b968603a57 made yaml format backwards compatible 2016-05-26 11:14:05 -07:00
Mario Melara
3b675d8b70 Changed comparison operator so that we don't get caught in an infinite loop 2016-05-26 11:09:14 -07:00
Gregory Becker
c30fe932d9 fixed mock config to use truncated versions of linux distro versions 2016-05-25 16:34:45 -07:00
Gregory Becker
8f99334f11 Fixed test config to work on yosemite 2016-05-25 16:06:14 -07:00
Todd Gamblin
76d42b5200 Merge pull request #982 from trws/rust 
Rust
 2016-05-25 15:15:51 -05:00
Gregory Becker
0f40174723 added test platform 2016-05-25 12:28:59 -07:00
Gregory Becker
3a68dd2011 (hopefully) final fixes of the merge 2016-05-25 12:22:16 -07:00
Gregory Becker
74dc7ffe4d updated documentation for cflags PR 2016-05-25 10:56:12 -07:00
Gregory Becker
513aae5ef8 fixed bug where earlier test was blowing away environment, causing an error on which('modulecmd') 2016-05-23 17:39:06 -07:00
Gregory Becker
1da6bbd146 Fixed a couple more bugs 2016-05-23 17:25:54 -07:00
Gregory Becker
d438ea0880 'Ugly merge because I mishandled git 
Merge branch 'save' into features/newarch
 2016-05-23 16:57:54 -07:00
Gregory Becker
d7612e7aaa Fixed errors caught by spec and concretize tests 2016-05-23 16:54:41 -07:00
Mario Melara
6c352132d0 Started writing documentation for architecture. Might need a couple more drafts 2016-05-23 14:28:00 -07:00
Todd Gamblin
3ab56a188e Fixes #980: really slow spack spec performance 
- `spack spec dealii` now takse seconds rather than 18 minutes.

- Slow hash (`dag_hash`) was accidentally inserted into the fast hash
  (`__hash__`).

- Do not put the slow hash in the fast hash.
 2016-05-22 18:33:13 -07:00
Tom Scogland
9bd4bc02d6 fixing warning for package fetch 2016-05-22 11:16:00 -07:00
Todd Gamblin
d087086581 update documentation. 2016-05-21 14:33:05 -07:00
Mario Melara
c3767d593d compiler list is sorted in descending order, in order to get most up to date version we check from the beginning of the list 2016-05-20 15:48:13 -07:00
alalazo
7303c387e8 autopep8 : fixed style 2016-05-20 10:34:11 +02:00
alalazo
b485ca8198 find : added unit tests, exits with 1 if -E and -e are given 2016-05-20 10:32:46 +02:00
Mario Melara
175a042fd3 Changed rpaths method so that it only grabs rpaths using the compiler module name instead of PrgEnv-x module name 2016-05-19 16:42:13 -07:00
Mario Melara
36450b9bc9 Adding link_paths to craype compilers 2016-05-19 14:25:50 -07:00
Gregory Becker
19c8a52fe1 fixed spec syntax test 2016-05-19 09:53:49 -07:00
Brett Viren
126fc10b9d Remove view print for now. 2016-05-19 08:36:18 -06:00
Gregory Becker
63459ab0c7 Fixed some of the bugs 2016-05-18 18:21:52 -07:00
Gregory Becker
01d5ffcd87 Fixed the first set of merge bugs 2016-05-18 17:42:11 -07:00
Mario Melara
16431f7a4c Merge branch 'features/newarch' of https://github.com/NERSC/spack into features/newarch 2016-05-18 17:26:30 -07:00
Mario Melara
b25da51638 Changed unsatisfiable architecture test 2016-05-18 17:26:06 -07:00
Mario Melara
6926f4d0da Changed arch tests to new spec target= os= 2016-05-18 17:23:10 -07:00
Gregory Becker
5417f1cdc6 more merge work 2016-05-18 17:21:03 -07:00