Commit graph

20600 commits

Author SHA1 Message Date
Adam J. Stewart
372ac4a073
Add testing for Python 3.9 (#19261) 2020-10-11 21:16:00 -07:00
Adam J. Stewart
759e8ee4c2
CUDA: update maintainers (#19262) 2020-10-11 21:11:17 -07:00
Toyohisa Kameyama
683ecb3f6e
mpifileutils: Add patch for aarch64. (#18724)
* mpifileutils: Add patch for aarch64.

* Update patch and limit version for apply patch.
2020-10-11 18:49:38 -05:00
Jean-Paul Pelteret
fe239c83fc
deal.II: Further modernisation and improvements (#19253) 2020-10-11 15:48:09 -04:00
Adam J. Stewart
cc136c27a9
Fix failing mpich build tests (#19259)
By default Spack uses the latest (highest version) GCC 
compiler available, which might change across updates
of the Github CI environment.

Since a C compiler is always installed and `mpich~fortran`
will result in faster build times, avoid building the FORTRAN
interface as part of the test.
2020-10-11 20:49:59 +02:00
Daniel Arndt
46cae921b9
Update datatransferkit (#19239)
Conflicts:
	var/spack/repos/builtin/packages/datatransferkit/package.py
	var/spack/repos/builtin/packages/xsdk/package.py
2020-10-11 13:27:54 -05:00
Roberto Di Remigio
7f46c11fda
Update XCFun with stable releases (#18784)
* Update XCFun with stable releases

* Fix lint
2020-10-10 21:14:15 -05:00
darmac
0ed8bbe765
Add new package: libgssglue (#18774) 2020-10-10 21:11:31 -05:00
darmac
be530949bb
Add new package: pinfo (#18806) 2020-10-10 21:11:03 -05:00
darmac
794f2c7510
Add new package: xdelta (#18827) 2020-10-10 21:09:55 -05:00
tcojean
a691e75af3
Ginkgo: new version and HIP support (#18842)
* Bump the Ginkgo version and add HIP support.

* Add the HIP variant to Ginkgo.

* Make HIP support work, check C++ compatibility.
2020-10-10 21:08:58 -05:00
Tom Payerle
793ffd8d9c
cpio: Fix issue compiling with newer intel compilers (#18854) (#18855)
* cpio: Fix issue compiling with newer intel compilers (#18854)

Do not add --no-gcc for recent intel compilers (e.g. 20.x)

* cpio: Remove --no-gcc flag for intel@19 as well as intel@20

Based on comments from @nrichart, removing --no-gcc option for intel@19
as well as intel@20
2020-10-10 21:07:04 -05:00
Toyohisa Kameyama
a408400619
audacious: add link type build to glib. (#18884) 2020-10-10 21:05:18 -05:00
Kelly (KT) Thompson
933aacf7b6
Provide draco-7_8_0. (#18947)
* Provide draco-7_8_0.

+ Also provide a patchfile for draco-7_6_0 to support CrayPE builds.
+ Version 7.8.0 has a new variant `+caliper`.
+ Sort dependencies alphabetically after grouping by required and optional.

* Remove patchfile that is no longer needed.

+ Newer versions of draco do not require this patch.
+ Older versions of draco are not supported for spectrum-mpi.

* Change new variant +caliper to default to False.
2020-10-10 21:02:00 -05:00
darmac
e8306e8f22
Add new package: less (#18952) 2020-10-10 21:00:54 -05:00
darmac
ec6f13aefa
Add new package: lsscsi (#18953) 2020-10-10 20:59:21 -05:00
darmac
6e4cf08984
Add new package: libnftnl (#18954) 2020-10-10 20:58:53 -05:00
darmac
edfac1a04f
Add new package: authd (#18955) 2020-10-10 20:58:29 -05:00
darmac
ff5d95da95
Add new package: backupninja (#18957) 2020-10-10 20:55:58 -05:00
darmac
3a59057f74
Add new package: universal-ctags (#18962) 2020-10-10 20:55:33 -05:00
darmac
28564620f6
Add new package: vtable-dumper (#18964) 2020-10-10 20:54:43 -05:00
Derek Ryan Strong
c9bee59bc3
pandoc: add variant for texlive (#18967)
* pandoc: add variant for texlive

Modifies the pandoc package by adding a variant for texlive, which is only needed for PDF output. Enables this variant by default.

* Fix whitespace
2020-10-10 20:53:51 -05:00
Toyohisa Kameyama
6383ef808d
poplpler: fix patch for 0.90.1. (#18969) 2020-10-10 20:53:05 -05:00
Sergey Kosukhin
5a49c2bcaf
parallel-netcdf: patch for PGI on Cray (#18972) 2020-10-10 20:50:25 -05:00
t-nojiri
b7ed6b4fe0
jellyfish@1.1.11: Change the type of the array dna_codes to the signed type. (#19019)
* jellyfish@1.1.11: Change the type of the array dna_codes to the signed type.

* jellyfish@1.1.11: Add patch file
2020-10-10 20:33:08 -05:00
Michael Kuhn
588cf7e03c
julea: Fix dependency typo and add new optional rocksdb dependency (#19045) 2020-10-10 20:28:56 -05:00
vvolkl
e37e66abd1
[dd4hep] update version v1.14.1 (#19056)
up
2020-10-10 20:26:44 -05:00
t-nojiri
1bd825674a
fl: Fix for aarch64 (#19089)
* fl: Fix for aarch64

* fl: Revise the points indicated by the review.
2020-10-10 20:25:36 -05:00
Tom Payerle
b3eb07cae0
superlu-mt: Add openmp flag to link command when using OpenMP (#19096)
Fix for #19095

When given +openmp, add the correct compiler openmp flag to the link
stage.  This seems to be required for %intel compilers.
I do this for all compilers, not just %intel, because it does not seem
to harm anything and might be beneficial for others (and just seems
'correct').
2020-10-10 20:24:08 -05:00
Pariksheet Nanda
9c5f0cab1d
meme: newer tarballs use a hyphen (#19222)
* meme: newer tarballs use a hyphen

* meme: remove trailing whitespace for flake8
2020-10-10 20:12:39 -05:00
Keita Iwabuchi
ea101daf81
Update Metall package to v0.4 and v0.5 (#19223)
* Metall: add version 0.2

* Add Metall v0.3

* Update Metall package to v0.4 and v0.5.
2020-10-10 20:11:40 -05:00
Dingwen Tao
03b9f0452c
Add cuSZ (#19228)
Co-authored-by: Dingwen Tao <tao@cs.ua.edu>
2020-10-10 20:10:55 -05:00
Melven Roehrig-Zoellner
ac91328c69
eigen: add a patch for 3.3.8 (#19229)
* eigen: add a patch for 3.3.8

* eigen: try to fix indenting
2020-10-10 20:09:21 -05:00
Hadrien G
528f86ddc4
[acts] Add version 1.1 (#19230) 2020-10-10 20:08:19 -05:00
Thomas Madlener
31772844d8
[whizard] Add compiler constraints and minimal ocaml version (#19231) 2020-10-10 20:07:43 -05:00
MichaelLaufer
ba04e8b890
parallel-netcdf: added burst buffer variant (#19237)
Co-authored-by: michael laufer <michael.laufer@toganetworks.com>
2020-10-10 19:56:51 -05:00
Andrew Gaspar
08a61006a5
Rust 1.47.0 (#19240) 2020-10-10 17:01:38 -05:00
h-denpo
cd800c20d3
asdcplib: Added PATH of openssl installed by spack to configure_args. (#19243) 2020-10-10 16:59:19 -05:00
Stan Tomov
160c00e3f7
Add MAGMA v2.5.4 release (#19245)
This release does not have conflict with CUDA 11.
2020-10-10 16:58:37 -05:00
darmac
3dd41548f6
Add new package: powertop (#18904) 2020-10-10 16:52:44 -05:00
Sajid Ali
9c56495503
py-scikit-image: bump version (#19153)
* py-scikit-image: bump version

* address reviewer comments

* address reviewer comments

* address reviewer comments

* py-scikit-image : update dependencies : part 2

* cloudpicke is a docs only dependency, enable it with a variant if necessary

* address reviewer comments

* cleanup build vs run deps

* address reviewer comments
2020-10-10 16:52:00 -05:00
Andrew Gaspar
ac7c3a1305
make py-pillow the default for pil (#19251)
py-pillow-simd is not portable to other architectures.
2020-10-10 12:55:07 -05:00
Jean-Paul Pelteret
69eb51dbfe
dealii: Reorganize package and add some new settings (#19137)
New variants:
- cxxstd
- examples
2020-10-10 09:20:53 -04:00
Geoff Womeldorff
35a9626ae9
Add package for FLCL (#19252)
* Initial cut at FLCL spackage. Works with GCC so far.

* Update spackage to list release which supports spack. Add @agaspar as a maintainer. Default unit tests to disabled when building with spack.

* Change url to 0.2.

* Nope, 0.3.
2020-10-09 17:37:17 -06:00
Danny Taller
012b4279b6
camp: new package (#19235) 2020-10-09 15:25:06 -07:00
Brian Van Essen
9a46ee0085
Fixed the dependency of newer OpenMPI on current hwloc. Pathch (#17917)
contributed by Thorsten Kurth.
2020-10-09 15:29:58 -05:00
谭九鼎
5e9f4dc982
Use https for links (#19244) 2020-10-09 11:24:09 -05:00
Andreas Baumbach
47e253f7fe
Add new package: bitsery (#19090) 2020-10-09 11:17:33 -05:00
Andreas Baumbach
830b30b8d5
Patch cereal (#19091)
Change-Id: I9fe2a1490c8c31a4174aca4ed2e270aa1efa1a50

Co-authored-by: Eric Müller <mueller@kip.uni-heidelberg.de>
2020-10-09 11:17:11 -05:00
Shahzeb Siddiqui
796561ed82
add package py-lmodule version 0.1.0 (#18856)
* add package py-lmodule version 0.1.0

Lmodule is tested with lmod >= 7.x. Lmod 6 has different json
structure in spider which is not supported by lmodule
2020-10-08 17:52:42 -05:00