Commit graph

2075 commits

Author SHA1 Message Date
Elizabeth Fischer
6a48385111 Keep users environment in the spack setup script (spconfig.py). This is important to avoid breaking things that require module loads to work; for example, non-activate Python packages. 2016-05-05 17:48:24 -04:00
Elizabeth F
2243de9e2f Make quiet mode default for spack spconfig 2016-05-04 23:39:27 -04:00
Elizabeth F
4d466fe879 spack setup: Fix broken module convenience settings. 2016-04-27 20:57:04 -04:00
citibeth
4a6b5d5247 Update to documentation formatting. 2016-03-27 00:14:10 -04:00
citibeth
a1c965d70d Fixed imports to make `git spconfig` work after recent merge from develop. 2016-03-26 20:40:22 -04:00
Elizabeth F
9889b1a5fe Added documentation for StagedPackage, etc. 2016-03-25 17:15:15 -04:00
Elizabeth F
8f675b0ee8 Made StagedPackage user-visible. 2016-03-25 17:15:06 -04:00
citibeth
358b387283 Merge remote-tracking branch 'upstream/develop' into efischer/160311-StagedPackage 2016-03-25 17:14:35 -04:00
Todd Gamblin
42ec822379 Merge pull request #633 from davydden/netcdf_curl
make netcdf link against Spack's curl
2016-03-25 12:54:53 -07:00
Todd Gamblin
8b2e79bcfa Merge pull request #485 from epfl-scitas/packages/blas_lapack_providers
reworking package : netlib
2016-03-25 12:53:46 -07:00
Todd Gamblin
680563cc4c Merge pull request #630 from davydden/metis_parmetis
Metis parmetis cleanup
2016-03-25 12:52:19 -07:00
Todd Gamblin
1d2d4b94c5 Merge pull request #629 from adamjstewart/fixes/info
Fix spack info indentation
2016-03-25 12:49:35 -07:00
citibeth
8019748396 Merge remote-tracking branch 'upstream/develop' into efischer/160311-StagedPackage
# Conflicts:
#	lib/spack/spack/package.py
2016-03-25 15:36:54 -04:00
Massimiliano Culpo
f15249afe5 Merge branch 'develop' of https://github.com/LLNL/spack into packages/blas_lapack_providers
Conflicts:
	var/spack/repos/builtin/packages/py-numpy/package.py
2016-03-25 11:05:05 +01:00
Denis Davydov
fd67da607e make netcdf link against Spack's curl 2016-03-25 09:32:48 +01:00
Denis Davydov
03c8a91f6a parmetis: avoid hardcoding -lm; use same approach as in METIS 2016-03-24 22:33:10 +01:00
Denis Davydov
0d4d201b70 patch parmetis to use external GKlib 2016-03-24 21:24:03 +01:00
Denis Davydov
7fb463abb9 install GKlib headers along with METIS 2016-03-24 21:24:03 +01:00
Adam J. Stewart
9985816642 Fix spack info indentation 2016-03-24 14:49:41 -05:00
Todd Gamblin
38ea75e8ca Merge pull request #490 from epfl-scitas/packages/atlas
atlas : provides both 'blas' and 'lapack'
2016-03-24 11:24:04 -07:00
Todd Gamblin
823edd0bb2 Merge pull request #627 from adamjstewart/features/numpy-scipy
Simplify NumPy dependencies
2016-03-24 11:05:09 -07:00
Todd Gamblin
3be081f476 Merge pull request #628 from alfredo-gimenez/develop
Remove incorrect sanity check for libelf
2016-03-24 11:01:46 -07:00
Alfredo Gimenez
254f65f299 Remove incorrect sanity check for libelf 2016-03-24 10:48:38 -07:00
Adam J. Stewart
8643e21913 Simplified NumPy dependencies 2016-03-24 12:34:58 -05:00
Todd Gamblin
b1cd8ea241 Merge pull request #625 from epfl-scitas/pythonpath
Fix : PYTHONPATH missing in module files
2016-03-24 03:25:59 -07:00
alalazo
758a9c9096 python extensions : create PYTHONPATH in module files 2016-03-24 10:57:46 +01:00
Todd Gamblin
7cf1b7ed51 Merge pull request #613 from davydden/superlu_dist_fix_lib
fix superlu-dist lib installation
2016-03-24 02:54:43 -07:00
Todd Gamblin
1306cdd998 Merge pull request #618 from epfl-scitas/fixes/espresso_no_module
fix : no module file gets generated by espresso
2016-03-24 02:53:56 -07:00
Todd Gamblin
4be8472f61 Merge pull request #612 from davydden/mumps_osx
fix MUMPS build on OSX (set parallel=False)
2016-03-24 02:53:29 -07:00
Todd Gamblin
f031bdfbc9 Merge pull request #617 from epfl-scitas/features/disable_modules
feature : module file generation may be disabled via configuration file
2016-03-24 02:52:45 -07:00
Todd Gamblin
e1848c1d28 Merge pull request #624 from davydden/parmetis_gnu
fix parmetis on Ubuntu with GNU compilers by linking to lm
2016-03-24 02:44:40 -07:00
Todd Gamblin
c83d22b5fc Merge pull request #587 from cyrush/cmake_pkg_openssl_as_variant
cmake package: add variant for openssl support
2016-03-24 02:42:39 -07:00
Denis Davydov
9b8b17b6f1 fix parmetis on Ubuntu with GNU compilers by linking to lm 2016-03-24 10:36:02 +01:00
alalazo
e4adc675e5 module files configuration : added default configuration 2016-03-24 10:04:02 +01:00
alalazo
f095e619b9 module files configuration : enable/disable logic is now positive 2016-03-24 09:31:28 +01:00
Todd Gamblin
b10a98a3ac Merge pull request #622 from davydden/blasklist_openblas_0216
blacklist Openblas 0.2.16 for missing _dggsvd_ and _sggsvd_
2016-03-23 19:07:11 -07:00
Denis Davydov
4e5dfc8b18 fix missing (depricated) _dggsvd_ and _sggsvd_ in Openblas 0.2.16 2016-03-23 22:09:39 +01:00
alalazo
acaa589bdd Merge branch 'develop' of https://github.com/LLNL/spack into packages/blas_lapack_providers
Conflicts:
	var/spack/repos/builtin/packages/netlib-lapack/package.py
2016-03-23 17:25:00 +01:00
alalazo
34a8f0c96b espresso : fixes #454 2016-03-23 17:01:52 +01:00
alalazo
d93f2b335d modules : fixed annoying indent 2016-03-23 16:04:36 +01:00
alalazo
0fbdb3f65d modules : added configuration file with disable keyword 2016-03-23 15:54:26 +01:00
Todd Gamblin
cc582dd4b4 Add mock python package. 2016-03-23 02:03:27 -07:00
Todd Gamblin
091fcc3aa9 Merge pull request #599 from davydden/slepc
add Slepc package
2016-03-23 01:53:32 -07:00
Todd Gamblin
a4f5084589 Merge pull request #609 from xjrc/packages/silo
Update Package : Silo
2016-03-23 01:52:56 -07:00
Todd Gamblin
71c976d212 Merge pull request #611 from davydden/p4est
add p4est package
2016-03-23 01:52:38 -07:00
Todd Gamblin
38350ae33d resurrect preferred=True option for packages lost in merge of externals support.
- Pyton 2.7.11 is preferred again.
2016-03-23 01:32:54 -07:00
Denis Davydov
01918a6f48 fix MUMPS build on OSX (set parallel=False) 2016-03-23 09:29:24 +01:00
Todd Gamblin
c4134ee71e Fix #608: broken numpy build.
- Failed to catch all instances of modify_module when it was renamed
  to setup_dependent_package.

- Refactored remaining modify_module calls.

- Also modified Python's setup_dependent_package slightly: only
  creates empty site-packages directory for Python extensions now, not
  for all dependents.
2016-03-23 00:36:32 -07:00
Denis Davydov
5b3c96a9bb fix superlu-dist lib installation 2016-03-23 08:07:45 +01:00
Joseph Ciurej
474db2085e Simplified the 'url_for_version' function for the 'Crypto++' package. 2016-03-22 15:55:54 -07:00