Commit graph

29097 commits

Author SHA1 Message Date
Harmen Stoppels
e7b14dd491
database: don't warn adding missing build deps (#33361)
When installing an individual spec `spack --only=package --cache-only /xyz`
from a buildcache, Spack currently issues tons of warnings about
missing build deps (and their deps) in the database.

This PR disables these warnings, since it's fine to have a spec without
its build deps in the db (they are just "missing").
2022-10-17 18:30:19 +02:00
Adam J. Stewart
839cf48352
py-horovod: add v0.26 (#33311)
* py-horovod: add v0.26

* py-petastorm: add v0.12.0
2022-10-17 09:14:55 -07:00
Harmen Stoppels
39105a3a6f
installer.py: traverse_dependencies has local deptype (#33367)
Currently `traverse_dependencies` fixes deptypes to traverse once and
for all in the recursion, but this is incorrect, since deptypes depend
on the node (e.g. if it's a dependency and cache-only, don't follow
build type edges, even if the parent is build from sources and needs
build deps.)
2022-10-17 16:14:12 +00:00
Massimiliano Culpo
9081871966
GnuPG: add v2.3.8 and update stack (#33368) 2022-10-17 10:13:52 -06:00
iarspider
ad430a7504
Add checksum for py-ipykernel 6.15.2 (#33360) 2022-10-17 10:59:21 -05:00
iarspider
db342d8727
Add checksum for py-secretstorage 3.3.3 (#33366) 2022-10-17 10:54:31 -05:00
Carlos Bederián
32761cdb7b
python: add 3.10.7, 3.9.14, 3.8.14, 3.7.14 (#32623) 2022-10-17 17:47:10 +02:00
Scott Wittenburg
29df7e9be3
Support spackbot rebuilding all specs from source (#32596)
Support spackbot rebuilding all specs from source when asked (with "rebuild everything")

- Allow overriding --prune-dag cli opt with env var
- Use job variable to optionally prevent rebuild jobs early exit behavior
- ci rebuild: Use new install argument to insist deps are always installed from binary, but
package is only installed from source.
- gitlab: fix bug w/ untouched pruning
- ci rebuild: install from hash rather than json file
- When doing a "rebuild everything" pipeline, make sure that each install job only consumes
binary dependencies from the mirror being populated by the current pipeline.  This avoids
using, e.g. binaries from develop, when rebuilding everything on a PR.
- When running a pipeline to rebuild everything, do not die because we generated a hash on
the broken specs list.  Instead only warn in that case.
- bugfix: Replace broken no-args tty.die() with sys.exit(1)
2022-10-17 09:45:09 -06:00
Harmen Stoppels
ea80113d0f
Github Discussions can be used for Q&A (#33364) 2022-10-17 08:38:25 -07:00
Rui Peng Li
4fe53061a8
hypre 2.26.0 (#33299) 2022-10-17 08:31:28 -07:00
iarspider
bfe49222d5
Add checksum for py-prompt-toolkit 3.0.31 (#33362) 2022-10-17 09:02:19 -06:00
iarspider
42a27f3075
Add checksum for py-grpcio-tools 1.48.1 (#33358) 2022-10-17 10:01:22 -05:00
Harmen Stoppels
e882583b01
installer.py: fix/test get_deptypes (#33363)
Fixing an oversight in https://github.com/spack/spack/pull/32537

`get_deptypes` should depend on new `package/dependencies_cache_only`
props.
2022-10-17 08:57:58 -06:00
Scott Wittenburg
1be6506e29
gitlab ci: Do not force protected build jobs to run on aws runners (#33314) 2022-10-17 07:29:56 -07:00
iarspider
25e35c936b
Add checksum for py-astroid 2.12.7, py-astroid 2.12.10, py-setuptools 62.6.0, py-wrapt 1.14.1, py-pylint 2.15.0 (#32976)
* Add checksum for py-astroid 2.12.7, py-setuptools 62.6.0

* Also add checksum for py-wrapt

* Update package.py

* Update package.py (#57)

* Update package.py

* Update package.py

* Update package.py
2022-10-17 08:09:52 -06:00
Harmen Stoppels
2c802c12a5
installer.py: show timers for binary install (#33305)
Print a message of the form
```
Fetch mm:ss.  Build: mm:ss.  Total: mm:ss
```
when installing from buildcache. 

Previously this only happened for source builds.
2022-10-17 15:54:40 +02:00
iarspider
f3523d8655
py-jupyterlab-pygments: install from wheel to avoid cyclic dependency (#33278)
* py-jupyterlab-pygments: avoid cyclic dependency

* Fix style

* Update package.py

* Update package.py

* [@spackbot] updating style on behalf of iarspider

* Update package.py

* Flake-8

* fix

Co-authored-by: iarspider <iarspider@users.noreply.github.com>
2022-10-17 07:42:01 -06:00
Adam J. Stewart
84fbccd682
py-numpy: add v1.23.4 (#33260) 2022-10-17 15:23:08 +02:00
iarspider
8dc2d37447
Add checksum for py-sniffio 1.3.0 (#32975) 2022-10-17 05:19:40 -06:00
Harmen Stoppels
9933a9046a
py-tensorflow-hub: zlib, again. (#33359) 2022-10-17 12:39:16 +02:00
Michael Kuhn
f3ebe237e5
mariadb-c-client: add 3.3.2, 3.2.7, 3.1.18, 3.0.10 (#33335) 2022-10-17 09:53:07 +02:00
Wouter Deconinck
7993d10e54
sdl2: add v2.0.22 and v2.24.1 (#33351) 2022-10-17 09:37:34 +02:00
Diego Alvarez
574ab3e40a
nextflow: add v20.10.0 (#33354) 2022-10-17 09:35:45 +02:00
Mosè Giordano
1338dbca56
libblastrampoline: Add versions 5.1.1, 5.2.0 (#33352) 2022-10-17 09:23:51 +02:00
Adam J. Stewart
02fb32bc1e
py-setuptools: add v65.5.0 (#33353) 2022-10-17 09:17:10 +02:00
Adam J. Stewart
25e4d48227
py-sphinx: add v5.3 and v5.2 (#33356) 2022-10-16 22:45:07 +02:00
Hans Fangohr
7547f1c414
octopus: upgrade to 12.1 (#33343) 2022-10-16 18:19:01 +02:00
Miroslav Stoyanov
0c505e459b
tasmanian: disable openmp by default (#33345) 2022-10-16 18:17:44 +02:00
Adam J. Stewart
23fe981c41
py-meson-python: add new versions (#33294) 2022-10-16 18:00:24 +02:00
Harmen Stoppels
f7f11fc881
py-tensorflow: fix zlib (#33349)
* py-tensorflow: fix zlib

* [@spackbot] updating style on behalf of haampie

Co-authored-by: haampie <haampie@users.noreply.github.com>
2022-10-16 05:09:56 -06:00
Adam J. Stewart
496f4193a6
meson: update OneAPI compiler support patch (#33293) 2022-10-16 11:53:54 +02:00
Jonathon Anderson
10491e98a8
CI: allow multiple matches to combine tags (#32290)
Currently "spack ci generate" chooses the first matching entry in
gitlab-ci:mappings to fill attributes for a generated build-job,
requiring that the entire configuration matrix is listed out
explicitly. This unfortunately causes significant problems in
environments with large configuration spaces, for example the
environment in #31598 (spack.yaml) supports 5 operating systems,
3 architectures and 130 packages with explicit size requirements,
resulting in 1300 lines of configuration YAML.

This patch adds a configuraiton option to the gitlab-ci schema called
"match_behavior"; when it is set to "merge", all matching entries
are applied in order to the final build-job, allowing a few entries
to cover an entire matrix of configurations.

The default for "match_behavior" is "first", which behaves as before
this commit (only the runner attributes of the first match are used).

In addition, match entries may now include a "remove-attributes"
configuration, which allows matches to remove tags that have been
aggregated by prior matches. This only makes sense to use with
"match_behavior:merge". You can combine "runner-attributes" with
"remove-attributes" to effectively override prior tags.
2022-10-15 17:29:53 +00:00
iarspider
898c0b45fb
Add checksum for py-seaborn 0.12.0 (#33145)
* Add checksum for py-seaborn 0.12.0

* Update package.py

* Update package.py

* [@spackbot] updating style on behalf of iarspider

* Update package.py

Co-authored-by: iarspider <iarspider@users.noreply.github.com>
2022-10-15 10:34:30 -05:00
Michael Kuhn
b2d7782b00
rocksdb: add 7.7.3 (#33341) 2022-10-14 22:34:17 -06:00
Harmen Stoppels
2f6a56a43b
depfile: update docs (#33279) 2022-10-15 06:10:05 +02:00
Michael Kuhn
31cda96181
glib: add 2.74.0 and 2.72.4 (#33332) 2022-10-14 21:27:08 -06:00
WuK
19226ecc49
gptl: new version 8.1.1; use the correct mpi fortran compiler (#33235)
* gptl: new version 8.1.1; use the correct `mpifc`
* add `F90` and `$F77`
2022-10-14 15:54:41 -07:00
Greg Sjaardema
2a166a5cc4
seacas: update to latest release (#33330)
Add checksum for latest tag/release
2022-10-14 15:49:06 -07:00
Erik Schnetter
a661193c64
ninja: New version 1.11.1 (#33215) 2022-10-14 14:31:42 -06:00
iarspider
9546eadd98
Add checksum for py-oauthlib 3.2.1 (#33201)
* Add checksum for py-oauthlib 3.2.1

* Update package.py

* [@spackbot] updating style on behalf of iarspider

* Update package.py

* Update package.py

Co-authored-by: iarspider <iarspider@users.noreply.github.com>
2022-10-14 12:46:08 -06:00
John-Luke Navarro
89b3e6c6d0
py-libensemble: updating package for v0.9.3 (#33298)
* commit updating py-libensemble package for 0.9.3

* removed commented-out lines
2022-10-14 11:01:57 -05:00
Satish Balay
6983d520fa
petsc,py-petsc4py,slepc,py-slepc4py: add version 3.18.0 (#32938)
* petsc,py-petsc4py,slepc,py-slepc4py: add version 3.18.0

* workaround for dealii build failure [with petsc version check]

* pism: add compatibility fix to for petsc@3.18

* add in hipsolver dependency
2022-10-14 08:12:16 -07:00
eugeneswalker
c44934a44d
hip@5.2.0 onwards: set prefix properly (#33257)
* hip-set-prefix-rocm5.2.0-onwards

* Update var/spack/repos/builtin/packages/hip/package.py

Update description

Co-authored-by: Satish Balay <balay@mcs.anl.gov>
2022-10-14 08:12:07 -07:00
Auriane R
67bc90acb7
Fix pika@0.9.0 sha (#33307) 2022-10-14 07:13:57 -06:00
Dan Bonachea
0de1f98920
UPC++/GASNet-EX 2022.9.0 update (#33277)
* gasnet: Add new release hash
* upcxx: Add new release hash
* gasnet: misc updates
* upcxx: misc updates
2022-10-13 18:50:27 -07:00
iarspider
c13381fab3
Add checksum for py-gitpython 3.1.27 (#33285)
* Add checksum for py-gitpython 3.1.27

* Update package.py

* Update var/spack/repos/builtin/packages/py-gitpython/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-10-13 20:27:39 -05:00
Adam J. Stewart
d5ebb55338
meson: remove slash in path (#33292) 2022-10-13 20:26:51 -05:00
Scott Wittenburg
7da303334e
gitlab ci: Print better information about broken specs (#33124)
When a pipeline generation job is automatically failed because it
generated jobs for specs known to be broken on develop, print better
information about the broken specs that were encountered.  Include
at a minimum the hash and the url of the job whose failure caused it
to be put on the broken specs list in the first place.
2022-10-13 16:35:07 -06:00
iarspider
43dd34b651
Add checksum for py-psutil 5.9.2 (#33139) 2022-10-13 15:06:06 -06:00
Jim Edwards
00ea25061f
add version 1.12.3 of parallel-netcdf (#33286) 2022-10-13 14:51:50 -06:00