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Author SHA1 Message Date
Garrett Morrison
0cec2d3110
zfp: update for version 1.0.0 (#33452) 
* zfp: updates and many fixes for version 1.0.0

Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
 2022-11-15 16:21:57 -07:00
Satish Balay
40e4884e8b
xsdk: add version @0.8.0 (#33794) 
- enable sundials+magma+ginkgo
- enable dealii+sundials
- disable dealii~cgal due to build errors
- enable petsc+rocm
- enable slepc+cuda+rocm
- enable strumpack+cuda+slate
- enable slate build with non-gcc compilers
- enable pumi+shared
- enable mfem+shared
- enable ginkgo+mpi
- add hiop
- and exago
  - use exago~ipopt due to mumps~mpi conflict with mpi.h)
  - add raja variant [used by exago/hiop]
    ~raja builds exago in pflow-only mode - i.e exago~hiop~ipopt~python~cuda ^hiop~cuda [Default on MacOS]

Co-authored-by: Cody Balos <balos1@llnl.gov>
 2022-11-15 16:52:58 -06:00
Jean-Luc Fattebert
f18425a51f
Update BML versions list in package.py (#33920) 
* Update BML versions list in package.py
* Update package.py
 2022-11-15 14:08:10 -08:00
Massimiliano Culpo
472893c5c4
Run Python 3.6 unit tests on ubuntu-20.04 (#33918) 2022-11-15 22:33:11 +01:00
SXS Bot
289bbf74f6
spectre: add v2022.11.15 (#33921) 
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
 2022-11-15 13:05:02 -08:00
Harmen Stoppels
a0182c069f
Show time per phase (#33874) 2022-11-15 21:10:07 +01:00
Erik Schnetter
4ecb6ecaff
meson: add new version 0.64.0 (#33880) 2022-11-15 12:42:11 -07:00
Saqib Khan
d5193f73d8
New Package: Prime95/Mprime (#33895) 
* New Package: Prime95/Mprime
* Fix trailing whitespaces in prime95
* Fix checksum for prime95

Signed-off-by: saqibkh <saqibkhan@utexas.edu>
 2022-11-15 11:39:02 -08:00
Brent Huisman
1aab5bb9f2
Add v0.8 to Arbor (#33916) 2022-11-15 12:57:29 -06:00
Erik Schnetter
8dda4ff60b
nsimd: Update Python requirements (#33879) 
We need Python 3.0:3.9
 2022-11-15 10:05:14 -08:00
iarspider
0811f81a09
thepeg: make rivet dependency optional... (#33912) 
* thepeg: make rivet dependency optional...
* add "libs" variant, move compiler flags to flag_handler

Co-authored-by: iarspider <iarspider@users.noreply.github.com>
 2022-11-15 09:36:15 -08:00
Harmen Stoppels
af74680405
depfile: improve tab completion (#33773) 
This PR allows you to do:

```
spack env create -d .
spack -e . add python
spack -e . concretize
spack -e . env depfile -o Makefile

make in<tab>              # -> install
make install-<tab>        # -> install-deps/
make install-deps/py<tab> # -> install-deps/python-x.y.z-hash
make install/zl<tab>      # -> install/zlib-x.y.z-hash

make SP<tab>              # -> make SPACK
make SPACK_<tab>          # -> make SPACK_INSTALL_FLAGS=
```
 2022-11-15 18:03:17 +01:00
Harmen Stoppels
d1715c5fdf
Fixup: start the timer before the phase (#33917) 2022-11-15 16:52:43 +01:00
Harmen Stoppels
b245f1ece1
Fix incorrect timer (#33900) 
Revamp the timer so we always have a designated begin and end.

Fix a bug where the phase timer was stopped before the phase started,
resulting in incorrect timing reports in timers.json.
 2022-11-15 16:33:47 +01:00
Harmen Stoppels
e10c47c53d
glib: add missing libelf dep (#33894) 2022-11-15 07:18:10 -07:00
Harmen Stoppels
0697d20fd4
openssh: add libxcrypt (#33892) 2022-11-15 06:58:12 -07:00
Brian Van Essen
fd4f905ce5
External find now searches all dynamic linker paths (#33800) 
Add spack.ld_so_conf.host_dynamic_linker_search_paths

Retrieve the current host runtime search paths for shared libraries;
for GNU and musl Linux we try to retrieve the dynamic linker from the
current Python interpreter and then find the corresponding config file
(e.g. ld.so.conf or ld-musl-<arch>.path). Similar can be done for
BSD and others, but this is not implemented yet. The default paths
are always returned. We don't check if the listed directories exist.

Use this in spack external find for libraries.

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2022-11-15 14:48:15 +01:00
Harmen Stoppels
d36c7b20d2
python: missing libxcrypt dep (#33847) 
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2022-11-15 14:36:16 +01:00
Harmen Stoppels
2948248d7a
Remove exit(0) (#33896) 
Since they cause --backtrace to report backtraces even with exit code 0
 2022-11-15 14:35:44 +01:00
Jonathon Anderson
850c54c3b1
Revert "fix perl libxcrypt.so dep (#33846)" (#33909) 
This reverts commit bf1b2a828c, as libxcrypt's configure script requires Perl, leading to a circular dependency.
 2022-11-15 14:04:31 +01:00
Harmen Stoppels
90fb16033e
gitlab: report load in generate job (#33888) 2022-11-15 13:21:21 +01:00
Matthieu Dorier
13a68d547d
mochi-margo: add v0.11 (#33910) 2022-11-15 13:19:18 +01:00
Massimiliano Culpo
857ae5a74b fixup 2022-11-15 12:42:48 +01:00
Massimiliano Culpo
b3124bff7c
Stop using six in Spack (#33905) 
Since we dropped support for Python 2.7, there's no need
so use `six` anymore. We still need to vendor it until
we update our vendored dependencies.
 2022-11-15 10:07:54 +01:00
Scott Wittenburg
5c4137baf1
gitlab: Add shared PR mirror to places pipelines look for binaries. (#33746) 
While binaries built for PRs that get merged must still be rebuilt
in develop pipelines, they can be used by other PRs that find they
would otherwise need to rebuild them.  Now that spackbot is
managing copying PR binaries from merged PRs into a shared location,
keeping it pruned to a reasonable size, and making sure the indices
are up to date, spack can use these mirrors as a potential source
of binaries.
 2022-11-14 19:37:23 -07:00
Stephen Sachs
a9dcd4c01e
[py-pmw-patched] needs setuptools to build (#33902) 
Error message:
```
ModuleNotFoundError: No module named 'setuptools'
```

Co-authored-by: Stephen Sachs <stesachs@amazon.com>
 2022-11-14 18:11:23 -06:00
Harmen Stoppels
2cd7322b11
swig: needs zlib (#33890) 2022-11-14 13:22:12 -07:00
Terry Cojean
f9e9ecd0c1
Ginkgo 1.5.0 version, new MPI variant, related fixes (#33838) 
* Ginkgo 1.5.0 release, new MPI variant

* Fix ROCTHRUST/ROCPRIM issues

* Fix deal.II issue with Ginkgo 1.5.0

* Also fix hipRAND+rocRAND RPATH settings

* Turn off CCACHE for spack builds.

Co-authored-by: Veselin Dobrev <dobrev@llnl.gov>

Co-authored-by: Veselin Dobrev <dobrev@llnl.gov>
 2022-11-14 12:33:11 -06:00
Veselin Dobrev
d756034161
Alquimia: tweak for building xsdk v0.8.0 with ROCm/HIP (#33881) 2022-11-14 12:15:50 -06:00
psakievich
2460c4fc28
Add $date option to the list of config variables (#33875) 
I'm finding I often want the date in my paths and it would be nice if spack had a config variable for this.

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2022-11-14 10:13:30 -08:00
Cory Bloor
6e39efbb9a
rocm: add all GFX9, GFX10 and GFX11 amdgpu_targets (#33871) 
This change adds all documented AMDGPU processors from GFX9 through GFX11 and sorts the list.
 2022-11-14 10:11:22 -08:00
Satish Balay
277e35c3b0
superlu-dist: add version 8.1.2 (#33868) 2022-11-14 10:09:55 -08:00
Harmen Stoppels
bf1b2a828c
fix perl libxcrypt.so dep (#33846) 
Detected using https://github.com/spack/spack/pull/28109
 2022-11-14 18:56:43 +01:00
Dom Heinzeller
2913f8b42b
hdf4: fix build on Apple M1 (#33740) 2022-11-14 17:49:34 +01:00
Harmen Stoppels
57f4c922e9
util-linux: fix deps (#33893) 2022-11-14 17:26:21 +01:00
Todd Gamblin
8d82fecce9 Update CHANGELOG.md for v0.19.0 
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2022-11-14 08:22:29 -06:00
Todd Gamblin
96126cbf17 Update SECURITY.md for v0.19 2022-11-14 08:22:29 -06:00
Todd Gamblin
6ecb57e91f Bump version to v0.20.0.dev0 2022-11-14 08:22:29 -06:00
Harmen Stoppels
a75af62fe3
Get rid of context for exceptions outside PackageBase (#33887) 2022-11-14 14:11:22 +01:00
Massimiliano Culpo
e4e02dbeae
Fix a bug/typo in a config_values.py fixture (#33886) 2022-11-14 05:26:14 -07:00
Massimiliano Culpo
3efa4ee26f
Remove support for running with Python 2.7 (#33063) 
* Remove CI jobs related to Python 2.7

* Remove Python 2.7 specific code from Spack core

* Remove externals for Python 2 only

* Remove llnl.util.compat
 2022-11-14 13:11:28 +01:00
Harmen Stoppels
f4c3d98064
libxcrypt: 4.4.31 (#33885) 2022-11-14 04:30:04 -07:00
Harmen Stoppels
a4cec82841
Speed up traverse unit tests (#33840) 2022-11-14 09:34:14 +01:00
Veselin Dobrev
3812edd0db
[plasma] add support for building with 'cray-libsci' (#33869) 2022-11-13 21:47:24 -06:00
Harmen Stoppels
3ea9c8529a
tau: checksum (#33873) 2022-11-13 13:06:08 -07:00
Adam J. Stewart
ed28797f83
GDAL: add v3.6.0 (#33856) 
* GDAL: add v3.6.0

* Explicitly control BASISU

* More reasonable variant defaults
 2022-11-13 13:56:11 -06:00
Adam J. Stewart
eadb6ae774
py-pytorch-lightning: add v1.8.1 (#33854) 2022-11-13 11:45:23 -08:00
Veselin Dobrev
a5d35c3077
[sundials] fix cmake argument generation for '+magma' (#33858) 
[dealii] force cmake to accept Scalapack settings from Spack
 2022-11-13 09:50:57 -06:00
Todd Gamblin
3d811617e6
hotfix: ensure that schema is compatible with tutorial VM config 
We added a hotfix to releases/v0.19 with a feature flag, but the flag
is incompatible with the config schema on `develop`.

- [x] Ensure schema is compatible on develop even though config option is unused.
 2022-11-13 09:14:00 -06:00
Massimiliano Culpo
03224e52d2
Speed-up bootstrap and architecture unit tests (#33865) 
* Speed-up bootstrap mirror unit test

The unit test doesn't need to concretize, since it checks
only metadata for the mirror.

* architecture.py: use "default_mock_concretization" for slow test
 2022-11-13 13:09:22 +01:00