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Author SHA1 Message Date
George Hartzell
52f0249c61 tcl is actually a runtime dependency. 
lmod uses tclsh at runtime, so adjust the depends_on accordingly
(thanks @davydden!).
 2016-07-21 13:51:03 -04:00
George Hartzell
a27cb639d8 The lmod package should depend_on('tcl') 
The lmod package needs a tclsh.  Up until now it just assumed
that one was available on the system.

This change adds a depends_on('tcl') to the lmod package.

The tcl package installs a tclsh script with an embedded version
number (e.g. tclsh8.6) but the lmod configuration looks for tclsh.
This change extends the tcl package to symlink tclshX.Y to tclsh in
the tcl package bin directory.
 2016-07-21 13:51:03 -04:00
Todd Gamblin
098af17971 Merge pull request #1208 from paulhopkins/bugfix/github1196-specify-preferred-variants 
Bugfix/github1196 specify preferred variants
 2016-07-21 08:36:19 -07:00
Todd Gamblin
5745ede31d Merge pull request #1328 from suraia/fix-recursive-module-load 
Fix recursive module loading
 2016-07-21 08:34:36 -07:00
Todd Gamblin
0b1d03abe6 Merge pull request #1327 from suraia/update-load-documentation 
Update documentation for recursive module loading
 2016-07-21 08:33:40 -07:00
Paul Hopkins
00280936da Flake8 fixes to ensure qa tests pass 2016-07-21 13:12:58 +01:00
Paul Hopkins
480fe9cb9a Re-add documentation for variant preferences 2016-07-21 12:32:00 +01:00
Paul Hopkins
bd91dd9d6d Allow users to supply preferred variants via packages.yaml 2016-07-21 12:32:00 +01:00
Michael Kuhn
732c24f603 Fix recursive module loading. 2016-07-21 13:15:53 +02:00
Michael Kuhn
4e1f86881a Update documentation for recursive module loading. 2016-07-21 13:15:10 +02:00
Gregory Lee
07d4c6cf0b Merge pull request #1205 from glennpj/psxe 
Setup environment for Intel Parallel Studio
 2016-07-20 21:14:34 -07:00
Glenn Johnson
ead1b93f75 MPI related changes 
- Redid the code for setting the itac symlink for the cluster edition.
- Removed the *PATH variables for MPI to avoid a conflict with other MPI
  environment modules.
- Added missing test for `+all` when checking variants.
 2016-07-20 20:03:05 -05:00
Glenn Johnson
0be4c7dfbd Changes as discussed in PR review 
- removed unneeded entry for `debugger/gdb/intel64_mic`
- set `+mpi` directory name to impi
 2016-07-20 20:03:05 -05:00
Glenn Johnson
5e5e36a659 Fix flake8 errors. 2016-07-20 19:54:35 -05:00
Glenn Johnson
16f67b5bb1 Setup environment for Intel Parallel Studio 
Set up the environment for the Intel compilers and tools. This commit
does the following:

- Unset variables that were incorrect from the auto guess prefix
  inspections.
- Add a RemovePath environment_modifications_formats for dotkit.
- Set the module environment variables appropriate for the different
  variants.
- Change the component logic so that the '+all' variant works. It was
  getting split by letter and leaving COMPONENTS empty.
- Added a variant checking function.
- Added NONRPM_DB_DIR to the silent.cfg so that the product database
  goes to the installation directory.
- With the product database in prefix the code to remove the product
  database file from the home directory is no longer needed and was
  removed.
- Reformat the 'tools' variant description.

There are probably more variables needed for the '+tools' for the
'professional' product version but I do not have access to that.
 2016-07-20 19:54:35 -05:00
Todd Gamblin
e389afedaa Merge pull request #1323 from glennpj/rlib 
Set environment variables for R
 2016-07-20 15:43:26 -07:00
Todd Gamblin
b9c79824a2 Merge pull request #1313 from sknigh/gnu-tools 
Added packages for GNU tools screen, datamash, and parallel
 2016-07-20 15:38:55 -07:00
Todd Gamblin
0777d3a5ba Merge pull request #1326 from mwilliammyers/package-openexr 
openexr : Add new package
 2016-07-20 15:35:36 -07:00
Glenn Johnson
0c75174ec3 Fix indent/flake8 error. 2016-07-20 15:56:20 -05:00
mwilliammyers
e973adf84b openexr : Add new package 2016-07-20 14:49:03 -06:00
Glenn Johnson
f9137f606f Set environment variables 
This commit adds `setup_environment` to export the libraries and
headers.

Fixes #1314.
 2016-07-20 15:37:31 -05:00
Todd Gamblin
8856a226c7 Merge pull request #1277 from mathstuf/special-deptypes 
deptypes: support special deptypes by string
 2016-07-20 13:15:57 -07:00
Todd Gamblin
d8acd41ba1 Merge pull request #1321 from mwilliammyers/package-ilmbase 
ilmbase : Add new IlmBase package
 2016-07-20 13:13:21 -07:00
Todd Gamblin
8efbec3c0b Merge pull request #1292 from eschnett/eschnett/hdf5-default-1.10 
Make newest HDF5 release the default version
 2016-07-20 12:57:45 -07:00
Todd Gamblin
4c7c9f4ff5 Merge pull request #1303 from adamjstewart/features/armadillo 
Updates to Armadillo package
 2016-07-20 12:56:41 -07:00
Todd Gamblin
cd4f429f72 Merge pull request #1319 from LLNL/cray-linker 
Cray linker
 2016-07-20 12:56:01 -07:00
Samuel Knight
24c14ff7a8 Added gnu packages datamash, parallel, and screen 2016-07-20 19:53:14 +00:00
Gregory Becker
eda1176ba7 added package as argument to setup_platform_environment 2016-07-20 12:26:31 -07:00
mwilliammyers
c9f4e8ce5a ilmbase : Add new IlmBase package 2016-07-20 13:13:47 -06:00
Gregory Becker
6983c1d30d Documented linker default 2016-07-20 12:04:00 -07:00
Gregory Becker
412618d531 fixed flake errors 2016-07-20 11:52:16 -07:00
Gregory Becker
7db4170062 removed commented-out code 2016-07-20 11:36:47 -07:00
Gregory Becker
f4fb9a0771 Set default link type to dynamic on cray. Includes hooks for platform-based environment changes 2016-07-20 11:35:13 -07:00
Todd Gamblin
79e066d53c Merge pull request #1315 from LLNL/improved-cray-detection 
Improved cray detection
 2016-07-20 11:11:56 -07:00
Gregory Becker
106147716a fixed flake errors 2016-07-20 11:00:56 -07:00
Gregory Becker
0d18f7249c fixed flake errors 2016-07-20 10:50:18 -07:00
Gregory Becker
26d1ddc176 Improved cray_xc detection bug fix 2016-07-20 10:28:38 -07:00
Gregory Becker
4c506b36c5 Improved cray_xc detection 2016-07-20 10:25:07 -07:00
Todd Gamblin
4434f482c0 remove FIXMEs 2016-07-20 09:48:54 -07:00
Todd Gamblin
3def8ef60e Merge branch 'cdo' of https://github.com/robertdfrench/spack into robertdfrench-cdo 2016-07-20 09:48:01 -07:00
Todd Gamblin
20584ab084 Merge pull request #1302 from robertdfrench/adios-url 
Get adios from github, not NCCS
 2016-07-20 09:47:23 -07:00
Todd Gamblin
7c28338d60 Merge pull request #1301 from robertdfrench/silver-searcher 
Silver Searcher 0.32 is out
 2016-07-20 09:47:12 -07:00
Todd Gamblin
17a63c9646 Merge pull request #1284 from eschnett/eschnett/py-h5py.2 
Declare dependency of "py-h5py +mpi" on "py-mpi4py"
 2016-07-20 09:45:54 -07:00
Todd Gamblin
01a361d637 Merge pull request #1288 from LLNL/features/cray_compiler_names 
Let packages call use_cray_compilers() in install to get , etc set to…
 2016-07-20 09:45:36 -07:00
Todd Gamblin
7f20678969 Merge pull request #1291 from eschnett/eschnett/netcdf-4.4.1 
Update NetCDF to version 4.4.1
 2016-07-20 09:34:14 -07:00
Erik Schnetter
69e36c9821 Ensure that per-4.4.1 NetCDF doesn't use HDF5 1.10 2016-07-20 11:25:46 -04:00
Todd Gamblin
c503b43e38 Merge pull request #1311 from adamjstewart/features/licenses 
Re-ignore licenses directory
 2016-07-20 07:14:47 -07:00
Adam J. Stewart
83330d2b59 Re-ignore licenses directory 2016-07-20 08:50:32 -05:00
Todd Gamblin
6501cba5a7 Merge pull request #1309 from LLNL/features/spack-defaults 
Add "default" configuration scope.
 2016-07-19 23:48:12 -07:00
Todd Gamblin
26480f14f9 Add "default" configuration scope. 
- Default scope is versioned with spack and can be overridden by site
  or user config.

- Default scope provides sensible default concretization preferences
  for all of Spack.

- per-platform concretization scope can be added later (to force a
  particular MPI on, e.g., Cray systems)
 2016-07-19 17:10:17 -07:00