* New Package: svn2git
https://github.com/nirvdrum/svn2git
svn2git is a tiny utility for migrating projects from Subversion to Git while
keeping the trunk, branches and tags where they should be. It uses git-svn to
clone an svn repository and does some clean-up to make sure branches and tags
are imported in a meaningful way, and that the code checked into master ends up
being what's currently in your svn trunk rather than whichever svn branch your
last commit was in.
* Actually requires +perl variant of subversion.
* fix style issue.
* Added magma package
* Incorporated Serban's change
* Remove deleted files
* argparse.py
* Sync forked Spack repo in github
* Use reported version of IBM XL Fortran compiler for compiler versions
>= 16.0.
Starting with the April 2018 release, the IBM XL C and Fortran
compilers report the same version, 16.0. Consequently, there is
no need to downgrade the Fortran compiler version to match that
of the C compiler.
* Eliminate blank lines.
* Update the Spectrum MPI package.py file to specify the correct compilation
scripts for the PGI compilers.
Fixes#7924
Spack's yaml schema validator was initializing all instances of
unspecified properties with the same object, so that updating the
property for one entry was updating it for others (e.g. updating
versions for one package would update it for other packages).
This updates the schema validator to instantiate defaults with
separate object instances and adds a test to confirm this behavior
(and also confirms #7924 without this change).
* mvapich2: add registration cache and file systems variants, avoid empty --with-pm= if no process manager is specified, add missing leading dash in --disable-silent-rules
* mpifileutils: roll back to dtcmp v1.0.3 due to API change, add option to build master branch
* add comment to explain why certain dtcmp is required, rename version for git branch
* dtcmp v1.0.2 is missing github tarball
When building eospac with %clang, spack's Fortran compiler wrapper is called
'flang', which is rejected by the eospac build system..Allow compilation with
%clang by patching the eospac build system.
My testing only covers %clang where flang is actually gfortran. However, this
patch only registers 'flang' as a known Fortran compiler and does not set any
flags or options that are compiler specific.
.
Add configurable HTTP, Python and readline support.
Add previously missing dependencies.
Minor patch to improve Python support (see https://github.com/xrootd/xrootd/pull/695).
* Use reported version of IBM XL Fortran compiler for compiler versions >= 16.0.
Starting with the April 2018 release, the IBM XL C and Fortran compilers report the same version, 16.0. Consequently, there is no need to downgrade the Fortran compiler version to match that of the C compiler.
* Use GitLab's API endpoint for fetching a git snapshot.
* More GitLab packages use the API.
* find_list_url for GitLab's API URLs.
* Flake8
* Url for 'hacckernels'.
* Check GitLab API regexps before the non-API ones.
* Add Trinity package
New package to install Trinity - another odd installer (assumes installation to /usr/local/bin and doesn't copy dot files hence deleting them)
* Update package.py
added dependencies from https://github.com/trinityrnaseq/trinityrnaseq/wiki/Installing-Trinity
* Update package.py
Copy tree to prefix.bin so that PATH can correctly be set for the Trinity command - can't split it off as it seems everything needs to stay together.
* Update package.py
Fixed over-length lines and space before comma
This commit fixes#7900.
In short: in the absence of constraints to the contrary, spack will
download the preferred version of a package, which is usually the most
recent non-develop version. On a clean spack installation without
hypre installed, `spack install mfem` will download hypre 2.14.0,
which is API-incompatible with mfem 3.3.2 (and earlier versions of
mfem), so spack will throw compiler errors re: the API mismatch.
This commit fixes that error by restricting mfem release versions
3.3.2 and earlier to hypre version 2.10.b to 2.13.999 (only 2.13.0
currently exists, but if it has a non-2.14.x maintenance release,
these versions of hypre should also be permitted).
* automake: added version 1.16.1
* lmod: added version 7.7.29
* git: added version 2.17.0
* tmux: added version 2.7
* scala: added version 2.12.5, fixed typo in version 2.10.6
* Added spark@2.3.0, hadoop@3.1.0, jdk@8u172-b11
* picard: added version 2.18.3
* tar: added version 1.30
