Commit graph

25651 commits

Author SHA1 Message Date
eugeneswalker
4817e4c80c
exago: use hipcc for +rocm builds (#30232) 2022-04-21 14:22:41 -06:00
eugeneswalker
111aeeb0ae
exago: depends on pkgconfig (#30231) 2022-04-21 13:21:16 -07:00
Erik Schnetter
3a70df9f64
fftw: Link explicitly against -lmpi (#29279)
* fftw: Link explicitly against `-lmpi`

Closes https://github.com/spack/spack/issues/29224.

* Generalize MPI flags

Co-authored-by: Dom Heinzeller <dom.heinzeller@icloud.com>

* Add platform guard

Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
Co-authored-by: Dom Heinzeller <dom.heinzeller@icloud.com>
2022-04-21 13:14:21 -06:00
Scott McMillan
616a8eebcd
perl: fix issues when compiling 5.34 with nvhpc compilers (#30110)
Co-authored-by: Scott McMillan <smcmillan@nvidia.com>
2022-04-21 11:10:46 -06:00
Harmen Stoppels
ac9bd3d72d
openssh: no pie for %nvhpc (#30189) 2022-04-21 11:21:35 +02:00
Tim Haines
7118602251
boost: add v1.79.0 (#30137) 2022-04-21 01:09:23 -05:00
marcost2
7ebce6191a
nvtop: add versions up to v2.0.1, rework package recipe (#30180) 2022-04-21 07:58:37 +02:00
Michael Kuhn
03832a0b0f
meson: add 0.62.0 and 0.61.4 (#30201) 2022-04-20 21:26:38 -06:00
Geoffrey Oxberry
b2534171be
ipopt: update urls to use github instead of coin-or.org, add version 3.14.5, add maintainer (#30207)
* ipopt: add goxberry as maintainer

This commit adds 'goxberry' (me, Geoff Oxberry) as a maintainer of the
Ipopt Spack package.

* ipopt: use github url instead of coin-or.org url

This commit changes the package URL for Ipopt from one containing
`coin-or.org` to one containing `github.com`. The rationale for
using `github.com` is as follows:

- The COIN-OR webpage now directs users interested in Ipopt source to
  GitHub.

- Ipopt used to have a COIN-OR project homepage actually hosted on
  coin-or.org using an SVN-Trac web page. A link to this project
  homepage no longer appears within the "Projects" section of
  COIN-OR's website.

- COIN-OR issued a 2021-12-15 post on the News section of its web site
  (see https://www.coin-or.org/news/) that discusses the impact that
  lack of financial support has on COIN-OR software maintenance. It
  seems reasonable to suspect that the GitHub project is likely to
  outlast the COIN-OR web site.

The sha256 hashes for ipopt@:3.12 downloaded from GitHub differ from
the corresponding COIN-OR versions, so these hashes are also updated.

* ipopt 3.14.5: add new version

This commit adds the latest version of Ipopt, 3.14.5, to the Ipopt
Spack package.
2022-04-20 19:18:55 -07:00
Tom Scogland
4905a71d6d
refactor powershell setup to make it sourceable (#29987)
* refactor powershell setup to make it sourceable

* only set editor if it is unset

* change directory to spack root in subshell

* Update share/spack/setup-env.ps1

Co-authored-by: John W. Parent <45471568+johnwparent@users.noreply.github.com>

Co-authored-by: John W. Parent <45471568+johnwparent@users.noreply.github.com>
2022-04-20 17:11:44 -07:00
eugeneswalker
0abc4564ae
hiop +rocm: use hipcc for cxx (#30182)
* hiop +rocm: use hipcc for cxx

* move CMAKE_CXX_COMPILER arg for +rocm case to existing block
2022-04-20 13:39:19 -07:00
eugeneswalker
13d05848ad
ipopt: use url_for_version to handle different urls for 3.13.4 onwards (#30197)
* ipopt: use url_for_version to handle different urls for 3.13.4 onwards

* ipopt: new versions: 3.14.1, 3.14.2, 3.14.3, 3.14.4

* fix indent
2022-04-20 13:38:21 -07:00
Giacomo Marciani
6f2f9653c5
[aws-parallelcluster] Fix maintainers (#30194) 2022-04-20 20:27:47 +02:00
Erik Schnetter
8556f83238
mpitrampoline: New version 4.0.0 (#30106) 2022-04-20 18:15:45 +02:00
haralmha
a717c5df40
py-httpstan: Add new package (#29770)
* py-httpstan: Add new package

* Fix dependencies

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Add run dependency to py-setuptools

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-04-20 11:07:43 -05:00
Wileam Y. Phan
3552cfac1a
fpm: add dependency on git (#30158) 2022-04-20 09:54:50 -06:00
Alex Hedges
b792e08c15
openssh: new version 9.0p1 (#30172) 2022-04-20 09:39:22 -06:00
snehring
d1d86d68f1
casper: fix compilation errors on newer compilers (#30142) 2022-04-20 17:11:05 +02:00
Harmen Stoppels
974beb4ffc
git: add 2.35.2 + deprecations (CVE-2022-24765) (#30040)
* git: add 2.35.2, explicit version(...)

git 2.35.2 fixes CVE-2022-24765 which seems to only affect Windows. But
nonetheless we should maybe set deprecated=True on older versions... The
restructure allows for that.

* deprecate over CVE-2022-24765
2022-04-20 07:22:20 -07:00
Harmen Stoppels
b7f8899d45
docs: add (config.yaml) to sections for faster lookup by config file (#30157) 2022-04-20 15:00:43 +02:00
Harmen Stoppels
e47ec07ffc
ucx: fix simd_values (#30186) 2022-04-20 10:00:45 +00:00
Axel Huebl
778eee1579
WarpX 22.04+: Fix RZ Test (#30185)
In WarpX 22.04, we introduced the openPMD `thetaMode` for fields in
RZ geometry. That means we need to name the fields differently than
the reconstructured Cartesian slice that we default to in plotfiles.
2022-04-20 02:18:46 -06:00
Ken Raffenetti
a43a633b2a
yaksa: add new package (#29877) 2022-04-20 09:56:02 +02:00
Asher Mancinelli
5e00dffe7f
Add new hiop version, add ginkgo glu version (#30178) 2022-04-20 09:51:58 +02:00
Dylan Simon
7aa1fef506
ncurses: add query parameters to select wide/nowide; readline: use wide only (#30144)
* ncurses: add wide, nowide headers, libs query parameter options

* readline: only link with libncursesw

Needed for python to detect proper ncurses library #27369
2022-04-20 09:44:34 +02:00
Giacomo Marciani
2d94624d0a
updated v2.11.6 (#30165) 2022-04-20 09:44:10 +02:00
Thomas Madlener
cc6cc4c7e5
dd4hep: Add latest version (#30164) 2022-04-20 09:43:54 +02:00
Mikael Simberg
943d463a2d
Configure nvhpc GCC from Spack variables (#29769)
Alter the `install_components/install` script to pass the `-gcc $SPACK_CC`,
`-gpp $SPACK_CXX`, and `-g77 $SPACK_F77` flags to `makelocalrc`.  This
ensures that nvhpc is configured to use the spack gcc spec, rather than
whatever gcc is found on the path.

Co-authored-by: Mikael Simberg <simberg@cscs.ch>

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2022-04-20 09:40:03 +02:00
Alex Hedges
53eb044b28
wget: new version 1.21.3 (#30175) 2022-04-20 07:31:33 +00:00
Alex Hedges
4f3553ae7c
util-linux: new version 2.38 (#30174) 2022-04-20 07:28:07 +00:00
Tim Haines
e59d7fcb9b
precice: conflict with boost@1.79.0 (#30179)
See https://github.com/precice/precice/pull/1250 for details.
2022-04-20 09:13:26 +02:00
Mark Grondona
056ea79d2c
flux-core: add v0.36.0-0.38.0, flux-sched: add v0.21.0-0.22.0 (#30176)
* flux-core: add v0.36, v0.37 and v0.38

 - add flux-core versions v0.36.0, v0.37.0, and v0.38.0.
 - add libarchive requirement for v0.38.0.
 - remove yaml-cpp depends which hasn't been required since v0.11

* flux-sched: add v0.21.0, v0.21.1, and v0.22.0

Add versions 0.21.0, 0.21.1 and 0.22.0 of flux-sched.
2022-04-20 09:12:33 +02:00
Adam J. Stewart
83533fc31f
PythonPackage docs: Spack now supports Windows (#30177) 2022-04-20 09:11:19 +02:00
Alex Hedges
0420c829c6
gzip: new version 1.12 (#30171) 2022-04-20 09:07:56 +02:00
Alex Hedges
c664a31f7b
strace: new version 5.17 (#30173) 2022-04-19 23:18:40 +00:00
Scott Wittenburg
a710a2425a
ci: Make test independent from any changes in spack repo (#30150)
Fix test_ci_generate_prune_untouched(), which would fail if run when
the latest commit changed the .gitlab-ci.yml.  This change mocks the
get_stack_changed() method in that test to disregard the state of
the current spack repo in favor of a mock repo under test control.
2022-04-19 16:27:24 -06:00
Erik Schnetter
5e014be8b7
hpx: Add missing boost+context dependency (#30108) 2022-04-19 16:48:49 -04:00
Harmen Stoppels
abc162cf3b
environment.py: write lockfile last (#30039)
This makes it easier to write `spack.lock: spack.yaml` type of rules in `Makefiles`.
2022-04-19 12:32:59 -07:00
John W. Parent
dc3cf5c6b0
OpenSSL package: fix ./configure error; restore parallel build (#29928)
* The configure script on Windows requires that CC/CXX be enclosed
  in quotes if the paths to those compiler executables contain
  spaces (so unlike most instances of Executable, the arguments
  need to contain the quotes)
* OpenSSL requires the nasm package on Windows
* Restore parallel build from 075e942 (accidentally reverted in
  #27021)
2022-04-19 11:04:26 -07:00
Harmen Stoppels
75638c1e88
ncurses: fix nvhpc, allow cmake+ncurses %nvhpc (#30162) 2022-04-19 10:19:19 -06:00
Jen Herting
fb5b78335b
[py-hpack] added version 3.0.0 (#29802)
* [py-hpack] py-wheel is implied by PythonPackage

* [py-hpack] fixes python dependency version

* [py-hpack] added version 3.0.0
2022-04-19 10:19:00 -06:00
haralmha
63600c0d0d
py-ipympl: Add new package (#29442)
* py-ipympl: Add new package

* Update var/spack/repos/builtin/packages/py-ipympl/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/py-ipympl/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/py-ipympl/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/py-ipympl/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Remove trailing whitespaces

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-04-19 11:12:06 -05:00
haralmha
beaf1c7fcc
py-webargs: Add new package (#29768)
* py-webargs: Add new package

* Fix python requirement

* Add run dependency to py-packaging

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-04-19 11:11:25 -05:00
Jen Herting
2da7f40cbc
[py-librosa] added version 0.9.1 and reformatted dependency list (#29544) 2022-04-19 11:10:10 -05:00
Jen Herting
4c446d54b1
New package: py-python-crfsuite (#29450)
* [py-python-crfsuite] created template

* [py-python-crfsuite]

- added homepage
- added description
- added dependencies
- removed fixmes
2022-04-19 11:09:47 -05:00
Christopher Kotfila
4067a28182
Set resource requests on package builds (#29922)
gitlab ci: Set resource requests explicitly

This PR sets resource requests for the Kubernetes executor, which should aid in
better workload scheduling in the cluster.  The specific values were derived from
profile data taken from several full "from scratch" rebuilds in a separate worker pool.

Co-authored-by: Zack Galbreath <zack.galbreath@kitware.com>
2022-04-19 10:09:32 -06:00
Sergey Kosukhin
f0ceeac0a8
serialbox: setup the run and dependent build environments (#29892)
* serialbox: setup the run and dependent build environments

* Update var/spack/repos/builtin/packages/serialbox/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-04-19 11:08:26 -05:00
snehring
2965a7a7e9
andi: add v0.14 (#30100) 2022-04-19 09:54:56 -06:00
snehring
3273928ddc
aperture-photometry: add v3.0.2, change url (#30103)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-04-19 15:50:53 +00:00
Sergey Kosukhin
a4f32dbf8d
netcdf-c: prevent overlinking to a system installation of libcurl (#28537) 2022-04-19 09:26:33 -06:00