Commit graph

593 commits

Author SHA1 Message Date
Tamara Dahlgren
3c3b18d858
spack ci: add support for running stand-alone tests (#27877)
This support requires adding the '--tests' option to 'spack ci rebuild'.
Packages whose stand-alone tests are broken (in the CI environment) can
be configured in gitlab-ci to be skipped by adding them to
broken-tests-packages.

Highlights include:
- Restructured 'spack ci' help to provide better subcommand summaries;
- Ensured only one InstallError (i.e., installer's) rather than allowing
  build_environment to have its own; and
- Refactored CI and CDash reporting to keep CDash-related properties and
  behavior in a separate class.

This allows stand-alone tests from `spack ci` to run when the `--tests`
option is used.  With `--tests`, stand-alone tests are run **after** a
**successful** (re)build of the package.  Test results are collected
and report(able) using CDash.

This PR adds the following features:
- Adds `-t` and `--tests` to `spack ci rebuild` to run stand-alone tests;
- Adds `--fail-fast` to stop stand-alone tests after the first failure;
- Ensures a *single* `InstallError` across packages
    (i.e., removes second class from build environment);
- Captures skipping tests for externals and uninstalled packages
    (for CDash reporting);
- Copies test logs and outputs to the CI artifacts directory to facilitate
    debugging;
- Parses stand-alone test results to report outputs from each `run_test` as
    separate test parts (CDash reporting);
- Logs a test completion message to allow capture of timing of the last
    `run_test` part;
- Adds the runner description to the CDash site to better distinguish entries
    in CDash tables;
- Adds `gitlab-ci` `broken-tests-packages` to CI configuration to skip
    stand-alone testing for packages with known issues;
- Changes `spack ci --help` so description of each subcommand is a single line;
- Changes `spack ci <subcommand> --help` to provide the full description of
    each command (versus no description); and
- Ensures `junit` test log file ends in an `.xml` extension (versus default where
    it does not).

Tasks:

- [x] Include the equivalent of the architecture information, or at least the host target, in the CDash output
- [x] Upload stand-alone test results files as  `test` artifacts
- [x] Confirm tests are run in GitLab
- [x] Ensure CDash results are uploaded as artifacts
- [x] Resolve issues with CDash build-and test results appearing on same row of the table 
- [x] Add unit tests  as needed
- [x] Investigate why some (dependency) packages don't have test results (e.g., related from other pipelines)
- [x] Ensure proper parsing and reporting of skipped tests (as `not run`) .. post- #28701 merge
- [x] Restore the proper CDash URLand or mirror ONCE out-of-band testing completed
2022-08-23 00:52:48 -07:00
Robert Cohn
00b244853e
enable packages that use numpy for oneapi e4s stack (#32293)
* enable geopm oneapi

* enable packages that depend on py-numpy

* disable nan warnings

* undo geopm enable

* undo geopm, it has multiple compile issues
2022-08-22 07:02:22 -07:00
sparkyniner
21e6679056
spack list: add --tag flag (#32016)
* modified list.py and added functionality for --tag

* Removed long and very long, shifted rest of code above return statement

* removed results variable

* added import statement at top

* added the line accidentally deleted

* added line accidentally deleted

* changed p.name to p, added line inside if statement

* line order switched

* [@spackbot] updating style on behalf of sparkyniner

* ran update completion command

* add tests

* Update lib/spack/spack/test/cmd/list.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* [@spackbot] updating style on behalf of sparkyniner

* changed argument to mock_packages and moved code under filter by tag

* removed bad rebase code and added additional test

* [@spackbot] updating style on behalf of sparkyniner

* added line removed earlier

* added line removed earlier

* replaced function

* added more recommended changes

Co-authored-by: sairaj <sairaj@sairajs-MacBook-Pro.local>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-08-20 16:09:44 -06:00
eugeneswalker
e1bce8c577
e4s %oneapi: add aml +ze (level zero) (#32161) 2022-08-19 08:25:15 -07:00
eugeneswalker
a42a874faa
e4s oneapi: compiler environment: prepend lib dir to LD_LIBRARY_PATH (#32227) 2022-08-19 06:30:18 -04:00
eugeneswalker
022d59f4a5
e4s: add dealii +cuda (#32159) 2022-08-18 22:41:57 -06:00
eugeneswalker
b2d1d07d2e
e4s %oneapi: add amrex +sycl (#32162) 2022-08-18 18:16:55 -07:00
Robert Cohn
1cdc50e3f6
ascent: fix oneapi build (#32239) 2022-08-18 17:15:39 +00:00
Massimiliano Culpo
7f81a0a25e
CI: move nightly macOS builds from GA to pipelines (#32231)
Modifications:
- [x] Delete the `macOS builds nightly` workflow
- [x] Removed shield in README.md
- [x] Moved corresponding specs to `e4s-macos`
2022-08-18 09:13:37 +00:00
eugeneswalker
d8689b5038
e4s mac ci: try lambda, the new mac studio runner (#32169) 2022-08-17 21:24:47 +00:00
eugeneswalker
5fe8ccca3a e4s oneapi stack: remove notes for now-fixed builds (#31839) 2022-08-17 13:57:13 +02:00
Massimiliano Culpo
6979d47cb6
CI: reduce the amount of tests run in the original concretizer (#32179)
* CI: reduce the amount of tests run in the original concretizer
* Don't test Python 3.6 on the original concretizer
2022-08-17 09:16:19 +02:00
eugeneswalker
0d7a6ec410
e4s: add flecsi +cuda (#32158) 2022-08-16 13:00:03 +00:00
eugeneswalker
fe77cc9b27
e4s: add ascent +cuda (#32153) 2022-08-16 10:47:17 +00:00
eugeneswalker
9bc537bb89
e4s: add amrex +cuda (#32152) 2022-08-16 09:08:26 +00:00
eugeneswalker
2c42ab45a0
e4s: add papi +rocm (#32150) 2022-08-16 08:26:06 +00:00
eugeneswalker
934db62541
e4s: add caliper +rocm (#32149) 2022-08-16 07:52:09 +00:00
eugeneswalker
43c0dac6f6
unifyfs %oneapi: add CFLAGS=-Wno-unused-function to build environment (#32107) 2022-08-15 10:43:39 -07:00
eugeneswalker
5bffd371e7
e4s ci: enable trilinos@13.4.0 +cuda build, issues resolved (#32124) 2022-08-15 09:06:03 -07:00
eugeneswalker
ad51e7d9f0
e4s ci: enable hpctoolkit +rocm (#32126) 2022-08-15 09:05:34 -07:00
eugeneswalker
4ec31003aa
e4s oneapi ci: enable hpx due to merged PR #32097 (#32117) 2022-08-12 23:41:53 -06:00
eugeneswalker
ffb63ca933
e4s oneapi: build tau %oneapi ^binutils%gcc (#32106) 2022-08-12 20:01:04 -07:00
Scott Wittenburg
cb19ca2471
gitlab ci: Make sure PR pipelines can push to buildcache (#32014)
On PR pipelines we need to override the buildcache destination to
point to the "spack-binaries-prs" bucket, otherwise, those pipelines
try to push to the default mirror in a bucket for which they don't
have write permission.
2022-08-12 16:53:59 +00:00
renjithravindrankannath
08e75f7a3e
rocm: add v5.2 for the entire stack (#31591) 2022-08-12 09:20:47 +02:00
Harmen Stoppels
ceda5fb46c
Don't set LD_LIBRARY_PATH by default on Linux (#28354)
`LD_LIBRARY_PATH` can break system executables (e.g., when an enviornment is loaded) and isn't necessary thanks to `RPATH`s.  Packages that require `LD_LIBRARY_PATH` can set this in `setup_run_environment`.

- [x] Prefix inspections no longer set `LD_LIBRARY_PATH` by default
- [x] Document changes and workarounds for people who want `LD_LIBRARY_PATH`
2022-08-11 09:33:08 -05:00
eugeneswalker
9215d59599
axom@0.6.1 %oneapi: patch examples (#31991)
* axom@0.6.1 %oneapi: patch examples

* uncomment axom%oneapi ci build now that it is fixed
2022-08-08 19:39:32 +00:00
eugeneswalker
e5eabe0cf6
e4s oneapi ci: unify when possible (#31965) 2022-08-08 09:22:32 +02:00
Massimiliano Culpo
9a48035e49 asp: refactor low level API to permit the injection of configuration
This allows writing extension commands that can benchmark
different configurations in clingo, or try different
configurations for a single test.
2022-08-03 18:01:08 -07:00
eugeneswalker
2b04c4f840
sundials@6.1.0:6.2.0 +rocm: patch nvector to use pic (#31910)
* sundials@6.1.0:6.2.0 +rocm: patch nvector to use pic

* e4s ci: add sundials +rocm
2022-08-03 16:01:59 -06:00
eugeneswalker
0462818c2e
e4s oneapi ci: build vtk-m ~openmp due to issue #31830 (#31840) 2022-08-02 14:45:58 -07:00
eugeneswalker
b3f221185e
butterflypack %oneapi: patch CMakeLists to solve issue #31818 (#31848)
* butterflypack %oneapi: patch CMakeLists to solve issue #31818

* uncomment builds affected by failing butterflypack

Co-authored-by: e <e>
2022-08-02 14:02:00 -06:00
eugeneswalker
0fc045392b
e4s oneapi stack: remove notes for now-fixed builds (#31839) 2022-08-01 12:03:39 -07:00
Todd Gamblin
143f3f830c style: simplify arguments with --tool TOOL and --skip TOOL
`spack style` tests were annoyingly brittle because we could not easily be
specific about which tools to run (we had to use `--no-black`, `--no-isort`,
`--no-flake8`, and `--no-mypy`). We should be able to specify what to run OR
what to skip.

Now you can run, e.g.:

    spack style --tool black,flake8

or:

    spack style --skip black,isort

- [x] Remove  `--no-black`, `--no-isort`, `--no-flake8`, and `--no-mypy` args.
- [x] Add `--tool TOOL` argument.
- [x] Add `--skip TOOL` argument.
- [x] Allow either `--tool black --tool flake8` or `--tool black,flake8` syntax.
2022-07-31 13:29:20 -07:00
Todd Gamblin
549ba1ed32 black: fix style check package and flake8 formatting for black
Black will automatically fix a lot of the exceptions we previously allowed for
directives, so we don't need them in our custom `flake8_formatter` anymore.

- [x] remove `E501` (long line) exceptions for directives from `flake8_formatter`,
      as they won't help us now.
- [x] Refine exceptions for long URLs in the `flake8_formatter`.
- [x] Adjust the mock `flake8-package` to exhibit the exceptions we still allow.
- [x] Update style tests for new `flake8-package`.
- [x] Blacken style test.
2022-07-31 13:29:20 -07:00
Todd Gamblin
67d27841ae black: configuration
This adds necessary configuration for flake8 and black to work together.

This also sets the line length to 99, per the data here:

* https://github.com/spack/spack/pull/24718#issuecomment-876933636

Given the data and the spirit of black's 88-character limit, we set the limit to 99
characters for all of Spack, because:

* 99 is one less than 100, a nice round number, and all lines will fit in a
  100-character wide terminal (even when the text editor puts a \ at EOL).
* 99 is just past the knee the file size curve for packages, and it means that packages
  remain readable and not significantly longer than they are now.
* It doesn't seem to hurt core -- files in core might change length by a few percent but
  seem like they'll be mostly the same as before -- just a bit more roomy.

- [x] set line length to 99
- [x] remove most exceptions from `.flake8` and add the ones black cares about
- [x] add `[tool.black]` to `pyproject.toml`
- [x] make `black` run if available in `spack style --fix`

Co-Authored-By: Tom Scogland <tscogland@llnl.gov>
2022-07-31 13:29:20 -07:00
eugeneswalker
d360551c16
e4s oneapi ci: uncomment pdt (#31803)
* e4s oneapi ci: uncomment pdt

* load oneapi compiler module before executing `spack ci rebuild`
2022-07-29 20:57:25 +00:00
eugeneswalker
9e683126f0
e4s ci: add tasmanian +rocm (#31606) 2022-07-29 11:43:34 -07:00
eugeneswalker
70c849f76b
e4s oneapi ci: uncomment parallel-netcdf (#31804) 2022-07-29 17:39:51 +00:00
eugeneswalker
ec8c8e8aa8
e4s ci: add oneapi stack (#31781)
* e4s ci: add oneapi stack

* shorten padded_length to 256

* comment out pdt and add failure note
2022-07-29 03:32:41 +00:00
eugeneswalker
5f845f3f31
e4s ci: add slate +rocm (#31602) 2022-07-27 15:36:59 -07:00
eugeneswalker
b38a814dc9
e4s ci stack: add spec: hdf5-vol-async (#31747)
* e4s ci stack: add spec: hdf5-vol-async

* hdf5-vol-async: add e4s tag
2022-07-26 16:21:56 -06:00
Harmen Stoppels
e7be8dbbcf
spack stage: add missing --fresh and --reuse (#31626) 2022-07-20 13:50:56 +02:00
eugeneswalker
b065d69136
e4s ci: add ginkgo +rocm (#31603) 2022-07-18 14:19:31 +02:00
Massimiliano Culpo
70be612f43
containerize: fix missing environment activation (#31596) 2022-07-18 10:31:16 +02:00
eugeneswalker
3cb6fd140c
update e4s to reflect june status (#31032) 2022-07-14 22:05:57 +00:00
Vanessasaurus
6b1e86aecc
removing feature bloat: monitor and analyzers (#31130)
Signed-off-by: vsoch <vsoch@users.noreply.github.com>

Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2022-07-07 00:49:40 -06:00
Scott Wittenburg
861edcf996
gitlab: Fix mirror url to match stack name (#31399)
We adopted the convention of putting binaries for each stack into
a dedicated mirror named after the directory in which the stack
(spack.yaml file) resides.  This fixes the mirror url of the
radiuss-aws-aarch64 stack to follow that convention.
2022-06-30 15:38:58 -07:00
Massimiliano Culpo
557abe04ec
Update containerize templates to account for view indirection (#31321)
fixes #30965
2022-06-29 15:39:18 +02:00
Marco De La Pierre
58b144c0da
Modify dockerfile template, so that any command can be executed (#29741) 2022-06-29 12:02:24 +00:00
David Beckingsale
170c605d6a
AWS RADIUSS builds (#31114)
* Add AWS RADIUSS builds

* Correct variable naming

* Add two more MFEM specs

* Updates to MFEM spec suggested by @v-dobrev

* Simplify MFEM specs
2022-06-28 12:15:53 -07:00