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py-pybedtools: new package at 0.6.9 (#11475)

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* py-pybedtools: new package at 0.6.9

* py-pybedtools: add bedtools2 dep
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Justin S 2019-05-17 14:32:21 -05:00 committed by Levi Baber
parent 79a0da6098
commit 7a459857e7
1 changed files with 23 additions and 0 deletions
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var/spack/repos/builtin/packages/py-pybedtools/package.py Normal file
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# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyPybedtools(PythonPackage):
"""Python wrapper -- and more -- for Aaron Quinlan's BEDTools"""
homepage = "http://daler.github.io/pybedtools"
url = "https://github.com/daler/pybedtools/archive/v0.6.9.tar.gz"
version('0.6.9', sha256='2639e80917999e76572017fd93757e8d7ceb384f0b92647ccfdd23a0d60def7c')
depends_on('bedtools2', type='run')
depends_on('py-cython', type=('build', 'run'))
depends_on('py-pysam', type=('build', 'run'))
depends_on('py-pandas', type=('build', 'run'))
depends_on('py-six', type=('build', 'run'))
depends_on('py-numpy', type=('build', 'run'))
depends_on('py-setuptools', type='build')