hlrs-software-stack/spack
7
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity

new package: py-weblogo (#7886)

Browse source
This commit is contained in:
Eric 2018-04-24 21:31:37 -05:00 committed by scheibelp
parent caa0c5c687
commit 5f04b0c538
3 changed files with 114 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

38
var/spack/repos/builtin/packages/pdf2svg/package.py Normal file
View file

@ -0,0 +1,38 @@
##############################################################################
# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Pdf2svg(AutotoolsPackage):
"""A simple PDF to SVG converter using the Poppler and Cairo libraries."""
homepage = "http://www.cityinthesky.co.uk/opensource/pdf2svg"
url = "https://github.com/dawbarton/pdf2svg/archive/v0.2.3.tar.gz"
version('0.2.3', 'd398b3b1c1979f554596238a44f12123')
version('0.2.2', 'f7e0d2213f9e1422cee9421e18f72553')
depends_on('cairo', type='run')
depends_on('poppler', type='run')

36
var/spack/repos/builtin/packages/poppler/package.py Normal file
View file

@ -0,0 +1,36 @@
##############################################################################
# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Poppler(CMakePackage):
"""Poppler is a PDF rendering library based on the xpdf-3.0 code base."""
homepage = "http://poppler.freedesktop.org"
url = "https://poppler.freedesktop.org/poppler-0.64.0.tar.xz"
version('0.64.0', 'f7f687ebb60004f8ad61994575018044')
depends_on('openjpeg', type=('build', 'run'))

40
var/spack/repos/builtin/packages/py-weblogo/package.py Normal file
View file

@ -0,0 +1,40 @@
##############################################################################
# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class PyWeblogo(PythonPackage):
"""WebLogo is a web based application designed to make the generation of
sequence logos as easy and painless as possible."""
homepage = "http://weblogo.threeplusone.com"
url = "https://pypi.io/packages/source/w/weblogo/weblogo-3.6.0.tar.gz"
version('3.6.0', 'd0764f218057543fa664d2ae17d37b6d')
depends_on('py-setuptools', type='build')
depends_on('ghostscript', type=('build', 'run'))
depends_on('pdf2svg', type=('build', 'run'))
depends_on('py-numpy', type=('build', 'run'))