genometools: new package (#4706)

* genometools: new package

* genometools: fixing perl dependency type

var/spack/repos/builtin/packages/genometools/package.py

@@ -0,0 +1,45 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+#############################################################################
+from spack import *
+
+
+class Genometools(MakefilePackage):
+    """genometools is a free collection of bioinformatics tools (in the realm
+       of genome informatics) combined into a single binary named gt."""
+
+    homepage = "http://genometools.org/"
+    url      = "http://genometools.org/pub/genometools-1.5.9.tar.gz"
+
+    version('1.5.9', 'e400d69092f9f13db09b33f9dea39d2e')
+
+    depends_on('perl', type=('build', 'run'))
+    depends_on('cairo')
+    depends_on('pango')
+
+    # build fails with gcc 7"
+    conflicts('%gcc@7.1.0:')
+
+    def install(self, spec, prefix):
+        make('install', 'prefix=%s' % prefix)