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2841 commits

Author SHA1 Message Date
Hrvoje Jasak
e2189947db Resolving merge commits 2019-02-13 15:41:35 +00:00
Hrvoje Jasak
37c728edfb Bugfix: nullptr 2019-02-13 15:38:37 +00:00
Hrvoje Jasak
b07ee20154 Improvement in protectedInitialRefinement. Author: Vuko Vukcevic 2019-02-13 15:27:57 +00:00
Hrvoje Jasak
4311ba296a GCC8 compatibility improvements. Cumulative improvment on gcc8 compliance. Added support for openmpi version 4.0.0 Updated cfMesh library to latest version. Author: Danial Khazaei 2019-02-13 15:25:42 +00:00
Hrvoje Jasak
396997c0ae BUGFIX: Compile WM_LABEL_SIZE=64 (final). Author: Henrik Rusche. 2019-02-13 15:17:29 +00:00
Hrvoje Jasak
9b5826bf88 Merge branch 'nextRelease' of ssh://git.code.sf.net/p/foam-extend/foam-extend-4.0 into nextRelease 2019-02-13 14:38:06 +00:00
Hrvoje Jasak
e7fff4e89c Reorder constructors 2019-02-13 14:35:45 +00:00
Hrvoje Jasak
76d57ed7fd Added syncPar switch to enable/disable parallel comms in polyMesh 2019-02-13 14:35:33 +00:00
Danial Khazaei
d2bc2468c7
format: make cfMesh banner consistent and removed trailing whitespace 2019-02-05 07:38:23 +03:30
Henrik Rusche
f000c7f6b8 List<label> -> labelList and simiar throughout 2019-02-04 21:58:51 +01:00
Henrik Rusche
951ca591e8 Fixes to avoid changing the operators in the control switches 2019-02-04 21:58:51 +01:00
Henrik Rusche
923fee738e BUGFIX: Compile WM_LABEL_SIZE=64 2019-02-04 21:58:51 +01:00
Vuko Vukcevic
11acc2de1d Temporary commit: intermediate refactorisation stage 2019-02-03 16:46:49 +01:00
Vuko Vukcevic
21154aa132 Temporary bugfix in decomposeMesh 
Needs clean-up and refactorization
 2019-02-01 09:43:40 +01:00
Danial Khazaei
5f08a2f90a
Bugfix: update cfMesh to v1.1 which fixes self-comparison always evaluates to false [-Wtautological-compare] 2019-01-31 17:52:39 +03:30
Danial Khazaei
0803bdbe20
Bugfix: fixed the compiler can assume that the address of ‘t’ will never be NULL warning [-Waddress] 2019-01-31 17:33:45 +03:30
Danial Khazaei
a480f9577c
Bugfix: type qualifiers ignored on cast result type 2019-01-31 17:16:18 +03:30
Danial Khazaei
23ef4e1dc3
Bugfix: overflow in conversion from Foam::label to int 2019-01-31 17:11:22 +03:30
Hrvoje Jasak
e1837adbf8 Cumulative development and fixes. Vuko Vukcevic. 2019-01-30 14:46:17 +00:00
Hrvoje Jasak
b3b16d1cc8 Layered overlap fringe strategy. Author: Vuko Vukcevic. Merge: Hrvoje Jasak. 2019-01-30 14:38:37 +00:00
Hrvoje Jasak
a031ca8136 Bugfix: Fixed missing dependency in Windows compilation. Henrik Rusche 2019-01-30 14:23:33 +00:00
Hrvoje Jasak
67e2f83134 Bugfix: resolving read problem in initialisation of IB patch fields 2019-01-29 09:53:30 +00:00
Hrvoje Jasak
758dad7a27 IB patch sizing trick deactivated 2019-01-26 13:19:35 +00:00
Hrvoje Jasak
01ae864020 remaining nullptr 2019-01-25 16:25:13 +00:00
Hrvoje Jasak
c6babd359a Update to c++-11 standard: nullptr and compilation flags 2019-01-25 16:22:44 +00:00
Hrvoje Jasak
0da8433b5d Delayed initialisation of the immersed boundary patch: avoid cutting at patchField initialisation and delay until fvMesh init 2019-01-25 16:16:16 +00:00
Hrvoje Jasak
17632aaa21 Parallelism and robustness improvements. Inno Gatin 2019-01-25 16:14:35 +00:00
Vuko Vukcevic
957235997b Bugfix in AMR related to PLB 
Allow 2:1 face consistency on possibly newly created processor faces.
 2019-01-25 10:26:08 +01:00
Vuko Vukcevic
920ff7bcc4 Manually merged Henrik's DLB and some other stuff 2019-01-23 13:03:44 +01:00
Vuko Vukcevic
0f73d80cf0 Added minimum protected level to protectedInitialRefinement 2019-01-23 09:39:20 +01:00
Vuko Vukcevic
abc4f08028 Bugfix in dimensions 
steadyStateDdtScheme::fvcDdtConsistentPhiCorr returns a zero field with wrong
dimensions (need to multiply with rAU dimensions instead of dividing).
Reported by InSu Lee, Seoul National University.
 2019-01-15 12:15:39 +01:00
Henrik Rusche
a18d10c0aa BUGFIX: new inletOutlet breaks with postfixedSubRegistry 2019-01-03 17:01:32 +01:00
Henrik Rusche
e114bb940d STYLE: Enable indentation for short non-contiguous lists 2018-12-30 16:06:11 +01:00
Dario Zivkovic
d40386d529 Make sixDoF's rmap override PointPatchFieldTemplate base class method 2018-12-24 14:49:22 +01:00
Vuko Vukcevic
75d5b4a289 Bugfix in pointPatchInterpolate 
Regarding boundary condition update for non coupled boundaries of point
fields, take 2 (my mistake: Vuko Vukcevic)
Author: Dario Zivkovic.
 2018-12-21 19:26:11 +01:00
Vuko Vukcevic
2afc0297bc Added access function to polyMeshGen in cartesianMeshGenerator 2018-12-12 16:16:31 +01:00
Hrvoje Jasak
0a5b18eff9 Added LUST scheme, moved linearUpwind 2018-12-12 13:21:24 +00:00
Vuko Vukcevic
9d01881b39 Wrapped Pout statements around debug switch 2018-12-11 12:44:59 +01:00
Vuko Vukcevic
ef386d6d44 Bugfix in pointPatchInterpolate 
Regarding boundary condition update for non coupled boundaries of point fields.
Author: Dario Zivkovic.
 2018-12-11 12:24:14 +01:00
Vuko Vukcevic
d078a84815 Bugfix in GeometricField::storeOldTimes 
Need to update timeIndex_ regardless whether the old field has been found.
 2018-12-06 16:20:21 +01:00
Vuko Vukcevic
ea8c85198c Whitespace clean-up and minor formatting 2018-12-06 16:18:53 +01:00
Vuko Vukcevic
73df75ce1a Improvement in refinement cell selection 
Check whether the refinement level would exceed the maximum specified refinement
level only after the buffer layers have been considered.
 2018-12-06 16:18:06 +01:00
Vuko Vukcevic
a6093ee081 Deleted donorBasedLayeredFringe 
This was pushed by mistake and it's not really finished.
 2018-12-06 16:11:17 +01:00
Hrvoje Jasak
752fce1a02 Updated tolerance handling in sampledSet. Inno Gatin 2018-12-04 12:42:59 +00:00
Hrvoje Jasak
4e4caff5c6 Bugfix: FVM functionality must use fvMesh and fvPatch data only. Immersed boundary support 2018-12-04 12:31:46 +00:00
Hrvoje Jasak
4b4856b9f6 Updated tolerance handling 2018-12-04 12:27:36 +00:00
Hrvoje Jasak
0ac7da5a36 Bugfix: double arrow in write 2018-12-04 12:27:19 +00:00
Hrvoje Jasak
50710e0253 Updated tolerance handling 2018-12-04 12:26:19 +00:00
Hrvoje Jasak
1b8d7cbce7 Robustness improvements and support for multiple immersed boundaries. Inno Gatin 2018-12-04 11:25:38 +00:00
Hrvoje Jasak
1a912d2914 Changed sampled set tolerance. Inno Gatin 2018-12-04 11:18:29 +00:00
Hrvoje Jasak
c76fd00001 Bugfix: nCyclicPatches is a label 2018-12-04 10:41:27 +00:00
Hrvoje Jasak
6ddddd9a96 Merge branch 'nextRelease' of ssh://git.code.sf.net/p/foam-extend/foam-extend-4.0 into nextRelease 2018-12-04 10:35:21 +00:00
Hrvoje Jasak
c96d019db1 Possible bug fixes in stream flushing for mesh objects 2018-12-04 10:34:31 +00:00
Hrvoje Jasak
b72caa65b7 Formatting 2018-12-04 10:32:25 +00:00
Hrvoje Jasak
857db99eb1 Added harmonic balance support 2018-12-04 10:31:08 +00:00
Hrvoje Jasak
ec17114a75 Formatting 2018-12-04 10:30:26 +00:00
Hrvoje Jasak
02dc1d6554 Fixed unused variable error 2018-12-04 10:30:02 +00:00
Hrvoje Jasak
da3db5cd07 Merge /u/dario-zivkovic/foam-extend/ branch BUGFIX-nextRelase-implement-mapping-methods-in-point-patch-vector-fields into nextRelease 
https://sourceforge.net/p/foam-extend/foam-extend-4.0/merge-requests/84/
 2018-12-03 17:15:44 +00:00
Vuko Vukcevic
75a6813d3a Whitespace clean-up and minor formatting 2018-11-26 10:27:15 +01:00
Hrvoje Jasak
b9d1febcdc Buxfix: multiGgiRotorFvMesh, move ggi zone points 2018-11-16 11:58:46 +00:00
Vuko Vukcevic
70967af85c Improvement in refinement cell selection 
Check whether the refinement level would exceed the maximum specified refinement
level only after the buffer layers have been considered.
 2018-11-15 18:22:51 +01:00
Hrvoje Jasak
35e0a53d62 Bugfix: Reading of zone meshes in parallel; load balancing 2018-11-08 19:32:34 +00:00
Hrvoje Jasak
b18df8c99e Dynamic mesh with multiple GGI rotors 2018-11-05 22:07:52 +00:00
Hrvoje Jasak
f85e54b3a2 Formatting 2018-11-05 22:07:15 +00:00
Dario Zivkovic
f22bc2261a Bugfix: added mapping methods to point patch vector fields that have pointField 'p0_' member. 2018-10-28 18:33:48 +01:00
Hrvoje Jasak
8a3e798d5a Resolve cell and point level load balancing for cases without adaptive refinement 2018-10-24 17:19:55 +01:00
Hrvoje Jasak
d23e612f80 Add brackets around send/receive of fields for better scoping in load balance comms 2018-10-24 17:15:19 +01:00
Hrvoje Jasak
556b9c0731 Remove global reduce in immersed boundary polyPatch. Testing, load balance 2018-10-24 17:10:47 +01:00
Hrvoje Jasak
69d3b15a86 Better messaging on debug 2018-10-24 17:10:05 +01:00
Hrvoje Jasak
59096bd2e1 Simplified form of dynamic mesh in load balancing 2018-10-24 17:09:25 +01:00
Hrvoje Jasak
8c81b396f0 Cannot evaluate mixedIbFvPatchField on creation from dictionary as it triggers calculation of intersection. Load balancing fix 2018-10-24 17:09:08 +01:00
Hrvoje Jasak
324b129060 Parallel load balancing: cannot use weights in field decomposition 2018-10-24 17:06:01 +01:00
Hrvoje Jasak
b60b67ffb6 Change format of global face index in passiveProcessorPolyPatch to labelField 2018-10-24 17:03:27 +01:00
Hrvoje Jasak
d05d477f30 Added virtual function for fvPatch slicing: support for immersed boundary 2018-10-24 16:53:25 +01:00
Hrvoje Jasak
f60da6ec49 Bugfix: operator= for PtrList needs to check if source pointers are set 2018-10-24 16:51:48 +01:00
Hrvoje Jasak
2a04913eaf Clean-up 2018-10-18 19:21:06 +01:00
Hrvoje Jasak
faf418d2fd Added load balance switch to topoChanger 2018-10-18 19:20:33 +01:00
Hrvoje Jasak
d9e45cb58c Clean-up of default copy constructors for polyPatches - copy constructor needed 2018-10-18 19:18:19 +01:00
Hrvoje Jasak
284344a11e Near-wall distance handling for variable number of patches during topo change: dynamic load balancing 2018-10-18 19:17:47 +01:00
Hrvoje Jasak
2ef8bbb6b7 Clean-up of default copy constructors for polyPatches - copy constructor needed 2018-10-18 19:17:14 +01:00
Hrvoje Jasak
d349a41795 LabelField change for pointLevel and cellLevel 2018-10-16 09:22:29 +01:00
Hrvoje Jasak
fbed59fec8 LabelField change for pointLevel and cellLevel 2018-10-16 09:21:57 +01:00
Hrvoje Jasak
96a2f708c6 Formatting 2018-10-16 09:21:38 +01:00
Hrvoje Jasak
e044a43866 Added info on refinement selection constructor 2018-10-16 09:20:30 +01:00
Hrvoje Jasak
7fc3e1d6bb Bugfix: dynamic refinement restart: only initialise topo modifiers if they haven't been read in during construction 2018-10-16 09:20:09 +01:00
Hrvoje Jasak
6b09536c33 Merged volume continuity check files 2018-10-12 10:37:05 +01:00
Hrvoje Jasak
e51b6eea28 Bugfix: whne comparing IB patch size, fvPatch is relevant (polyPatch size is different and wrong) 2018-10-11 17:15:07 +01:00
Vuko Vukcevic
68b3c8db64 Bugfix in layered overlap fringe 
Forgot that I have to clean-up everything on update
 2018-10-09 14:59:22 +02:00
Vuko Vukcevic
89ba5dc8f9 Layered overlap fringe strategy 
Quite simple: goes nLayers away from specified holes to define acceptors.
 2018-10-09 14:52:45 +02:00
Henrik Rusche
487d4b5e30 BUGFIX: Fixed missing dependency in Windows compilation 2018-10-08 17:52:13 +02:00
Hrvoje Jasak
81f6f900b4 Formatting 2018-10-05 18:22:48 +01:00
Hrvoje Jasak
eac673ee7c Update poly refinement to escape multiple checks within a time-step 2018-10-05 18:22:24 +01:00
Hrvoje Jasak
9cca3228bf Added functions to carry patch type when a base copy constructor is not called 2018-10-05 18:21:48 +01:00
Hrvoje Jasak
a9cb8f1cc2 Improved controls for immersed boundary refinement: inside of the IB object 2018-10-05 18:21:00 +01:00
Hrvoje Jasak
ee10ee60aa Updated header comments 2018-10-05 18:20:20 +01:00
Hrvoje Jasak
0545b117c1 Improve immersed boundary debug info 2018-10-05 18:19:07 +01:00
Hrvoje Jasak
6246dd6946 Bugfix: carry immersed boundary patch type 2018-10-05 18:18:55 +01:00
Hrvoje Jasak
723da35299 Typo in comment 2018-10-01 19:08:06 +01:00
Hrvoje Jasak
dace0ac19d Merge branch 'nextRelease' of ssh://git.code.sf.net/p/foam-extend/foam-extend-4.0 into nextRelease 2018-09-26 17:27:29 +01:00
Hrvoje Jasak
c6460044b2 Bugfix: double execution of function objects per time-step 2018-09-26 17:26:40 +01:00
Hrvoje Jasak
c3251bc400 Reset gamma and sGamma patch values for IB patches 2018-09-26 14:50:38 +01:00
Hrvoje Jasak
6ba8b5e6b3 Bugfix: remove reset of pressure field on evaluate for fvs immersed boundary 2018-09-26 14:48:03 +01:00
Hrvoje Jasak
69e10d419c Control debug messages 2018-09-26 13:29:38 +01:00
Hrvoje Jasak
154fcce817 Fixed comment 2018-09-26 13:28:13 +01:00
Hrvoje Jasak
32d3595ded PLB with particles + accumulated bugfixes/backports. Author: Henrik Rusche. 2018-09-25 12:30:18 +01:00
Hrvoje Jasak
95d31b8b9d Bugfix related to variable time step on deforming meshes using backward scheme. Author: Vuko Vukcevic. Merge: Hrvoje Jasak 2018-09-25 11:59:54 +01:00
Henrik Rusche
ef1c4242c1 Bugfix in shared point detection (not all problems resolved, yet) 2018-09-25 09:13:00 +02:00
Henrik Rusche
05e7057e4d Backward compatibility and erroneous comment in DiagTensor 2018-09-25 09:12:59 +02:00
Henrik Rusche
a9c7a176e3 BUGFIX: Mesh update in lagrangian 2018-09-25 09:12:59 +02:00
Henrik Rusche
c001bc33b7 BUGFIX: hanging pointer if the local mesh is empty (no need to map particles) 2018-09-25 09:12:59 +02:00
Henrik Rusche
f67382b044 BACKPORT: MVC interpolation 2018-09-25 09:12:58 +02:00
Henrik Rusche
0d33286f17 BUGFIX: incremental switch merged incorrectly 2018-09-25 09:12:58 +02:00
Henrik Rusche
8d356e7456 PLB with clouds 2018-09-25 09:12:53 +02:00
Vuko Vukcevic
9b48a244ab Bugfix and improvement in interpolateXY template 
1. Bugfix: template instantiation failed for anything except scalar for function
   returning Field<Type> because the author used scalarField instead of
   Field<Type> to calculate interpolated values.
2. Improvement: returning tmp<Field<Type> > instead of Field<Type> to avoid
   copying.
 2018-09-24 16:57:22 +02:00
Vuko Vukcevic
d5b37a2d37 Bugfix: mesh flux using backward scheme with variable time step 
The coefficients in backwardDdtScheme::meshPhi did not correctly take into
account the possibility of having variable time steps.

Reported by Sopheak Seng, Bureau Veritas.
 2018-09-07 14:56:55 +02:00
Hrvoje Jasak
ec998a5bc1 Update debug message formatting 2018-09-07 13:43:22 +01:00
Hrvoje Jasak
ff509e6a62 Update reading mechanism for patch type in immersed boundary 2018-09-07 09:51:02 +01:00
Hrvoje Jasak
bcb361ba75 Handling refinement selection tolerances 2018-09-06 18:34:48 +01:00
Hrvoje Jasak
094039ec24 Fix set dead cell value for moving immersed boundary 2018-09-06 18:33:34 +01:00
Hrvoje Jasak
012e01815a Bugfixes in immersed boundary fvPatches: patch type 2018-09-06 18:33:14 +01:00
Hrvoje Jasak
58421f0713 Bugfix: Area tolerances needed in thin face cut 2018-09-06 18:32:35 +01:00
Hrvoje Jasak
7508fede0b Bugfix: mis-identified wet/dry face 2018-09-06 18:32:13 +01:00
Hrvoje Jasak
e38c7e68ec Formatting 2018-09-06 18:23:41 +01:00
Hrvoje Jasak
aa5131b114 Dynamic refinement with immersed boundary wall function: fixes 2018-09-06 18:23:21 +01:00
Hrvoje Jasak
dd5757b78a Minimum face area refinement selection algorithm for 2D cases. Author: Vuko Vukcevic. Merge: Hrvoje Jasak. 2018-09-05 12:19:35 +01:00
Vuko Vukcevic
fac6af9e34 Minimum 2D face area refinement selection algorithm 
Basically a 2D version of minCellVolume refinement which is quite useful for
wedge geometries. If a per-cell-maximum face area on empty (or wedge) patch
exceeds a specified minimum face area, cell is selected for refinement. Used as
a part of composite refinement.
 2018-09-04 13:00:35 +02:00
Vuko Vukcevic
c7cd6b09fd Bugfix when writing overset region index 
The values at the coupled boundaries haven't been properly uninitialized and the
coupled patches have been skipped from assignement to patch internal field.
 2018-09-03 09:39:54 +02:00
Vuko Vukcevic
02bc8b5f69 Bugfix in MixingPlaneInterpolation due to recent GGI updates 
MixingPlaneInterpolation is actually implemented in terms of GGIIinterpolation
and that one now has handling of partially overlapping faces (needed for bridge
overlap option). There's a tolerance GGIUncoveredFaceAreaTol (defaults to 0.999)
which needs to be set to 0 in case of Mixing Plane to properly re-scale the
weights. This is now done in MixingPlaneInterpolation.
 2018-08-31 14:38:15 +02:00
Vuko Vukcevic
52b2e5e0e5 Bugfix and clean-up in leastSquaresVectors 
1. Need to call fvPatchField::coupled() instead of fvPatch::coupled() since the
   patch type can be coupled and the field doesn't have to be (e.g. regionCouple
   fvPatch with zeroGradient fvPatchField).
2. Clean-up of old debugging statements.
 2018-08-30 16:38:47 +02:00
Vuko Vukcevic
b4f9cbd029 Bugfix: missing updateMesh call for function objects 
Function object updates on topo changes are now properly handled
 2018-08-30 16:27:35 +02:00
Hrvoje Jasak
d2666ed38f Bug fix for negative rpm in ramping MRF cases. Gregor Cvijetic 2018-08-23 12:14:34 +01:00
Hrvoje Jasak
be8da8b80c Updated mechanism of implicitness across coupled boundaries with transforms and mixing plane bug fix 2018-08-23 12:07:39 +01:00
Hrvoje Jasak
23ad1613aa Porting: added missing foamTime.H header 2018-08-23 09:49:11 +01:00
Hrvoje Jasak
bf8d5ed3ad Minor clean-up 2018-08-23 09:48:27 +01:00
Hrvoje Jasak
64ef3b387f Merge branch 'nextRelease' of ssh://git.code.sf.net/p/foam-extend/foam-extend-4.0 into nextRelease 2018-08-21 14:59:29 +01:00
Hrvoje Jasak
a0ca6258df New fv fvs patch field vidtual function: update on motion. Immersed boundary support 2018-08-21 14:59:11 +01:00
Hrvoje Jasak
6ec2ad6239 Comment clean-up 2018-08-21 14:58:26 +01:00
Hrvoje Jasak
871d03e4d3 Rename private member deltaCoeffs 2018-08-21 14:38:27 +01:00
Hrvoje Jasak
65fcc20630 Aded swirlInletVelocity boundary condition 2018-08-21 14:37:27 +01:00
Hrvoje Jasak
d5b9215b1e Moving immersed boundary turbulence modelling support 2018-08-21 14:36:29 +01:00
Hrvoje Jasak
1e8ecf40c5 Clean-up 2018-08-21 14:17:25 +01:00
Hrvoje Jasak
19794a6eba Immersed boundary moving mesh turbulence updates; fundamental IB patch field updates 2018-08-21 14:17:03 +01:00
Hrvoje Jasak
45eb621334 Formatting 2018-08-10 13:26:47 +01:00
Vuko Vukcevic
e0a0502320 Same missing reduce in overlapFringe 2018-08-10 12:13:58 +02:00
Vuko Vukcevic
3d3edc820a Forgot to reduce when handling error 
This caused a parallel run to fail if there's no fringe on all processors.
 2018-08-06 22:19:27 +02:00
Hrvoje Jasak
b813e11b75 Update to noSuitability DSF and tutorials. Author: Vuko Vukcevic. Merge: Hrvoje Jasak. 2018-07-30 19:35:36 +01:00
Vuko Vukcevic
3a08616a79 Added a few FatalError checks 
1. donorSuitability::suitabilityFaction(...) - now checks whether the donor has
   been found (in case we don't have any eligible donors due to poor settings),
2. overlapFringe/adaptiveOverlapFringe::updateIteration(...) - now checks
   whether we have found at least 1 new acceptor when going through the
   iterative process.
 2018-07-30 10:40:07 +02:00
Vuko Vukcevic
2f00bb4af1 Update to noSuitability DSF 
Threshold now needs to be set to SMALL due to changed definition of DSF's
isDonorSuitable and suitabilityFraction member functions.
 2018-07-30 08:32:00 +02:00
Hrvoje Jasak
185ab1ad60 Adaptive mesh refinement for 2D cases. Author: Vuko Vukcevic. 2018-07-28 13:52:59 +01:00
Hrvoje Jasak
adac44fc7e Fixing compilation errors gcc 8.1. Author: Martin Beaudoin. Merge: Hrvoje Jasak. 2018-07-28 13:51:43 +01:00
Hrvoje Jasak
5d3a0cef95 ThirdParty package updates. Author: Martin Beaudoin. Merge: Hrvoje Jasak. 2018-07-28 13:50:43 +01:00
Hrvoje Jasak
9acce17165 Adaptive overlap fringe assembly. Author: Josip Katavic and Vuko Vukcevic. Merge: Hrvoje Jasak. 2018-07-28 13:49:21 +01:00
Hrvoje Jasak
69878923f9 Bugfix in periodic oscillation constraint. Author: Vuko Vukcevic. Merge: Hrvoje Jasak. 2018-07-28 13:48:08 +01:00
Vuko Vukcevic
3ec42ce8c8 Bugfix in prismatic2DRefinement 
Forgot to enable wedge cases by including handling of wedge patches along with
the empty patches.
 2018-07-27 14:50:35 +02:00
Vuko Vukcevic
9ec8d55010 Include coupledFvPatchFields.H instead of coupledFvPatchField.H 2018-07-27 11:03:56 +02:00
Vuko Vukcevic
875f0809a3 Writing regionIndex automatically 2018-07-26 16:27:31 +02:00
Vuko Vukcevic
6ba57d44fc Bugfixes in automatic overlap assembly 
adaptiveOverlapFringe:
1. When combining user specified holes and cut holes, we need to get rid of
   possible duplicates,
2. All holes transferred to fringeHolesPtr_, not just cutHoles,
3. Removed minLocalSuit_ data member as the donorSuitability::threshold is
   basically the same thing.

donorSuitability:
1. Correct definition of isDonorSuitable
 2018-07-26 15:46:05 +02:00
Vuko Vukcevic
6974c3f99f Bugfix in protectedInitialRefinement strategy 
Protect only if the current cell level is equal to the initial cell level,
otherwise allow to unrefine.
 2018-07-26 07:35:16 +02:00
Vuko Vukcevic
dbbad653fe Updates to overlap assembly strategies 
Added optional cellSet for hole cells to start the overlap and adaptiveOverlap
from. Useful when the background mesh is very coarse compared to the hole patch
in the front mesh and no hole is actually found in triSurface hole cutting
procedure.
 2018-07-25 07:37:09 +02:00
Martin Beaudoin
2b9049af90 Correction for newer (and older) versions of gcc: You throw by value, you catch by reference. 
A second correction was needed.
 2018-07-23 16:45:39 +00:00
Martin Beaudoin
9ed4526742 Correction for newer (and older) versions of gcc: You throw by value, you catch by reference. 2018-07-23 16:18:31 +00:00
Vuko Vukcevic
56144efed0 Spelling errors in comments 2018-07-23 11:25:12 +02:00
Vuko Vukcevic
7a0ce22052 Removed redundant debug write of cell set 2018-07-23 09:59:07 +02:00
Vuko Vukcevic
93e8ebe4cc Changed default value for minLocalSuit in adaptiveOverlapFringe 2018-07-23 09:48:59 +02:00
Martin Beaudoin
ac2005f15e Minor compilation corrections. g++ version 8.1 was sensitive to those and treating them as errors. 2018-07-22 03:55:59 +00:00
Martin Beaudoin
58b8dac7ec Delay the compilation of the library decompositionMethods/decomposeReconstruct 
so its dependencies are available when recompiling from scratch
 2018-07-20 12:32:31 -04:00
Henrik Rusche
734628ceb0 BACKPORT: MVC interpolation 2018-07-20 17:52:32 +02:00
Henrik Rusche
f3d133d0cf BUGFIX: incremental switch merged incorrectly 2018-07-20 17:44:37 +02:00
Hrvoje Jasak
baa0bc875a Code reorganisation: immersed boundary support 2018-07-17 09:40:06 +01:00
Vuko Vukcevic
ef5f6a5f59 Donor/acceptor within boundig box criterion update 
Previously, we only checked whether the acceptor point is within bounding box of
donor, which may not be fair. Now, we also check whether the donor point is
within bounding box of acceptor.

Having both checks makes sense since there's no reason to prefer one criterion
over the other.
 2018-07-16 16:39:09 +02:00
Vuko Vukcevic
b46ede8553 Bugfix: suitablePairsSuit_ must be data member 2018-07-16 15:34:54 +02:00
Vuko Vukcevic
3142fa27ee Parallelised adaptiveOverlapFringe 2018-07-16 14:13:31 +02:00
Vuko Vukcevic
497ccfada8 Updates (fixes) to adaptiveOverlapFringe 
1. Clearing out temporary worker data for dynamic cases,
2. minLocalSuitability and orphanSuitability now given as fractions (0 to 1)
   instead of percentages (0 to 100%).
 2018-07-16 12:51:21 +02:00
Vuko Vukcevic
ed06d9d919 Minor style change: adaptiveOverlapFringe 2018-07-12 19:34:32 +02:00
Vuko Vukcevic
ea0466aa43 Adaptive overlap fringe algorithm by Josip Katavic 2018-07-12 15:37:20 +02:00
Vuko Vukcevic
8a1f5f66fc Updates to overlapFringe::evaluateNonOversetBoundaries 
This function is now static instead of ordinary member function so it can be
used by adaptiveOverlapFringe. A slight reorganization of this is needed.
 2018-07-12 15:35:22 +02:00
Vuko Vukcevic
c9cfe3cbf8 Compilation fixes due to updated code 
1. Donor suitability functions now hold reference to oversetFringe (base class)
   and not the overlapFringe,
2. Missing curly braces in oversetRegion.
 2018-07-12 14:19:52 +02:00
Vuko Vukcevic
7ae045b32b Changed directory structure for overlapFringe 2018-07-12 13:51:05 +02:00
Vuko Vukcevic
4b485ab906 Updates to oversetRegion 
1. Avoid deleting holeCells and eligibleDonorCells if region has not found
   suitable overlap,
2. When choosing donors, make a preference depending on whether the donor is
   within acceptors bounding box (among other things).
 2018-07-12 13:47:43 +02:00
Vuko Vukcevic
1e57733ed1 Updates to donorSuitability 
Added suitabilityFraction member function which returns how suitable
donor and acceptor are (0: not suitable at all, 1: perfectly suitable).
 2018-07-12 13:45:43 +02:00
Vuko Vukcevic
e56083051e Updates to donorAcceptor 
Added data member to check whether the donor is within bounding box of the
acceptor.
 2018-07-12 13:44:09 +02:00
Vuko Vukcevic
8bfcd34ffe Bugfix in periodicOscillation::stabilise 
Added missing motion amplitude and velocity amplitude when stabilising the
constraint.
 2018-07-12 13:36:39 +02:00
Vuko Vukcevic
9dae7c64bf Additional refinement selection strategy: protectedInitialRefinement 
This strategy allows us to protect the initial refinement done using
snappyHexMesh or similar meshers where the cellLevel and pointLevel are used and
written down. The strategy protects refined cells (during the meshing stage)
from unrefinement. To be used as part of compositeRefinement.
 2018-07-10 16:08:37 +02:00
Hrvoje Jasak
304d230d1a Fixed evaluation problem when regionCoupling is inactive 2018-07-06 10:08:24 +01:00
Vuko Vukcevic
2ecd49f2be Corrected error message in refinement.C 2018-07-05 16:48:20 +02:00
Vuko Vukcevic
2d66abcadf Cleaned-up include directives for refactored classes 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
778af3691a Fixed error on FatalErrorIn call 
abort(FatalError) must be called and not abort(FatalErrorIn)
 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
086fad1ecc Refactored adaptive mesh refinement polyMeshModifiers 
Base class "refinement" that contains necessary interface and all the data
members and member function used by both derived classes:
1. polyhedralRefinement: used for 3D isotropic refinement,
2. prismatic2DRefinement: used for 2D isotropic refinement.

Note: refactorisation not tested yet.
 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
a29e1ead28 Refactored dynamicPolyRefinementFvMesh class 
Enabled automatic switching between polyhedralRefinement engine for 3D and
prismatic2DRefinement engine for 2D.
 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
2d845a809c Updates to polyhedralRefinement engine 
1. Make sure that we don't refine over maximum refinement level when extending
   refinement cells over additional buffer layers,
2. Removed redundancy check which becomes wrong in case we are running dynamic
   load balancing,
3. Removed deprecated hard-code where the cells protected from unrefinement are
   extended by nUnrefinementBufferLayers_ + 2 instead of just
   nUnrefinementBufferLayers_
 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
a913c28897 Updates to prismatic2DRefinement.C related to unrefinement 
Enabled unrefinement (splitting of boundary points and removing internal faces)
using the existing removeFaces engine.
 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
7524014a37 2D AMR: prismatic2DRefinement polyMeshModifier 
Ported prismatic2DRefinement class from other temporary repository. Basically a
version of polyhedralRefinement specifically designed for 2D cases.

Status:
Refinement seems to work well on simple cases:
  1. 4 by 4 hex cells (quad prisms),
  2. 28 triangular prisms,
  3. Tested both in serial and parallel up to 9 refinement levels.

To do:
  1. Implement proper 2D unrefinement,
  2. Refactor prismatic2DRefinement and polyhedralRefinement to avoid duplicate
     functions used by both classes.
 2018-07-05 07:17:57 +02:00
Martin Beaudoin
6aba1630ed Minor corrections for compiling under macOS High Sierra (10.13.5) using 
the stock compiler Apple LLVM version 9.1.0 (clang-902.0.39.2)
 2018-06-24 22:15:40 -04:00
Hrvoje Jasak
e01e16c943 Refactorization of incompressible/compressible nut/mut wall functions. Author: Vuko Vukcevic. Merge: Hrvoje Jasak. 2018-06-20 13:34:29 +01:00
Vuko Vukcevic
3de5d66021 Compilation bugfixes: 
1. Forgot to define typeName and debug level for
   nutWallFunctionFvPatchScalarField and mutWallFunctionFvPatchScalarField
2. Forgot to remove declaration of write(Ostream&) member function in
   nutSpalartAllmarasWallFunction and mutSpalartAllmarasWallFunction
 2018-06-19 15:38:48 +02:00
Vuko Vukcevic
4ec81f9103 Update to backwardsCompatibilityWallFunctions.C 
autoCreateMut now creates mutkWallFunction by default (instead of abstract base
class mutWallFunction)
 2018-06-19 15:22:23 +02:00
Vuko Vukcevic
306bd93e81 Removed deprecated mutRoughWallFunction 
Replaced by mutkRoughWallFunction
 2018-06-19 15:20:33 +02:00
Vuko Vukcevic
da6f48e599 Refactored remaining Spalart Allmaras mut wall functions 
1. mutSpalartAllmarasStandardWallFunction: same as mutUWallFunction
2. mutSpalartAllmarasStandardRoughWallFunction: same as mutURoughWallFunction
3. mutSpalartAllmarasWallFunction: refactored such that it derives from
   mutWallFunction
 2018-06-19 15:18:04 +02:00
Vuko Vukcevic
6681c7e1ee Added mutURoughWallFunction for compatibility with incompressible wall functions 
This BC is the same as mutSpalartAlmarasStandardRoughWallFunction. We will
refactor mutSpalartAlmarasStandardRoughWallFunction such that it derives from
this BC in order to have both backward compatibility and compatibility with
incompressible wall functions.
 2018-06-19 15:15:08 +02:00
Vuko Vukcevic
660326047d Added mutUWallFunction for compatibility with incompressible wall functions 
This BC is the same as mutSpalartAlmarasStandardWallFunction. We will refactor
mutSpalartAlmarasStandardWallFunction such that it derives from this BC in order
to have both backward compatibility and compatibility with incompressible wall
functions.
 2018-06-19 15:12:56 +02:00
Vuko Vukcevic
671ad26638 Refactored mutkRoughWallFunction according to the new interface 2018-06-19 15:09:56 +02:00
Vuko Vukcevic
3d7f902f82 Refactored nutkWallFunction according to the new interface 
mutkWallFunctionFvPatchScalarField now derives from
mutWallFunctionFvPatchScalarField
 2018-06-19 15:05:12 +02:00
Vuko Vukcevic
0726060d77 Refactored mutLowReWallFunction according to the new interface 2018-06-19 15:03:51 +02:00
Vuko Vukcevic
e7af83c8da Refactored mutWallFunctionFvPatchScalarField 
This class is now abstract base class from which all other mut wall functions
will derive. Similar organization as for nutWallFunctionFvPatchField
 2018-06-19 15:02:15 +02:00
Vuko Vukcevic
335d25ad1d Minor formatting in some nut wall functions 2018-06-19 14:55:12 +02:00
Vuko Vukcevic
003a9e9eb4 Update to backwardsCompatibilityWallFunctions.C 
autoCreateNut now creates nutkWallFunction by default (instead of abstract base
class nutWallFunction)
 2018-06-19 14:53:43 +02:00
Vuko Vukcevic
8241e75d28 Updated Make/files for refactored wall functions 2018-06-19 12:09:38 +02:00
Vuko Vukcevic
27ddb9849c Refactored nutLowReWallFunction according to the new interface 2018-06-19 12:09:14 +02:00
Vuko Vukcevic
5c16db8055 Refactored nutMEWTWallFunction according to the new interface 2018-06-19 12:06:55 +02:00
Vuko Vukcevic
a598804c79 Refactored nutCWTWallFunction according to new interface 2018-06-19 12:04:20 +02:00
Vuko Vukcevic
798d0f0a4d Refactored nutSpalartAllmarasWallFunction according to the new interface 2018-06-19 11:27:01 +02:00
Vuko Vukcevic
8612bd74d3 Removed deprecated nutRoughWallFunction 
Replaced by nutkRoughWallFunction
 2018-06-19 11:23:53 +02:00
Vuko Vukcevic
7bc178f100 Refactored nutSpalartAllmarasStandardRoughWallFunction 
This wall function is now the same as nutURoughWallFunction, we simply derive
from it to enable backward compatibility.
 2018-06-19 11:22:57 +02:00
Vuko Vukcevic
b31f23321a Refactored nutSpalartAllmarasStandardWallFunction 
This wall function is now the same as nutUWallFunction, we simply derive from it
to enable backward compatibility.
 2018-06-19 11:21:28 +02:00
Vuko Vukcevic
68d275b2b8 Backported nutURoughWallFunction from Vanilla 
This BC is the same as nutSpalartAllmarasStandardRoughWallFunction. We will
refactor nutSpalartAllmarasStandardRoughWallFunction such that it derives from
this BC in order to have both backward compatibility and compatibility with
Vanilla.
 2018-06-19 11:17:37 +02:00
Vuko Vukcevic
0c17c8057e Refactored nutkRoughWallFunction according to Vanilla 
Derives from nutkWallFunctionFvPatchScalarField
 2018-06-19 11:15:00 +02:00
Vuko Vukcevic
c4db345abe Backported nutUWallFunction from Vanilla 
This BC is the same as nutSpalartAlmarasStandardWallFunction. We will refactor
nutSpalartAlmarasStandardWallFunction such that it derives from this BC in order
to have both backward compatibility and compatibility with Vanilla.
 2018-06-19 11:10:32 +02:00
Vuko Vukcevic
f78472f100 Refactored nutkWallFunction according to Vanilla 
nutkWallFunctionFvPatchScalarField now derives from
nutWallFunctionFvPatchScalarField
 2018-06-19 11:07:06 +02:00
Vuko Vukcevic
ae91f480ce Refactored nutWallFunction according to Vanilla 
nutWallFunctionFvPatchScalarField is now an abstract base class (no default
behaviour)
 2018-06-19 11:01:36 +02:00
Vuko Vukcevic
2b6f07eb43 Minor formatting in sixDOFODE class 2018-06-19 07:49:20 +02:00
Vuko Vukcevic
cee5c3e681 Added acceleration access function to sixDOFODE interface 
1. Translational acceleration in absolute coordinate system (A)
2. Rotational acceleration in relative coordinate system (OmegaDot)
 2018-06-19 07:45:18 +02:00
Hrvoje Jasak
6cdc361218 Fixed heat flux temperature BC for buoyant solvers. Author: Vuko Vukcevic. Merge: Hrvoje Jasak 2018-06-18 11:27:31 +01:00
Hrvoje Jasak
8e00ea5e5e Merge commit '751a876460d1e24cef150eb8048bd726833b3196' into nextRelease 2018-06-18 11:26:44 +01:00
Hrvoje Jasak
61b494c16c Merge branch 'nextRelease' of ssh://git.code.sf.net/p/foam-extend/foam-extend-4.0 into nextRelease 2018-06-18 11:25:39 +01:00
Hrvoje Jasak
d20b1781a7 Immersed boundary wall functions, WIP 2018-06-18 11:24:23 +01:00
Hrvoje Jasak
a2c594ea77 File reorganisation: immersed boundary 2018-06-18 11:22:27 +01:00
Hrvoje Jasak
78f4654c4f File reorganisation 2018-06-18 11:14:08 +01:00
Hrvoje Jasak
66e79e2e94 Remove swig support ifdefs 2018-06-18 11:13:32 +01:00
Hrvoje Jasak
7a848fd050 Remove swig support ifdefs 2018-06-18 11:12:55 +01:00
Hrvoje Jasak
367f3b33d4 Change constructor ordering in file 2018-06-18 11:11:39 +01:00
Hrvoje Jasak
a34f0344e9 Optionally read enthalpy if present to allow settings of complex (conjugate) boundary conditions 2018-06-18 11:10:28 +01:00
Hrvoje Jasak
75eae97648 Update on conjugate heat transfer tools 2018-06-18 11:09:02 +01:00
Inno Gatin
751a876460 Added combined motion restraints in sixDOFODE to handle rotationa and translation in with a same object, 2018-06-18 11:00:46 +02:00
Henrik Rusche
f148ca0ed2 BUGFIX: pisoControl does not trigger 'Final' 2018-06-14 11:45:02 +02:00
Henrik Rusche
88a815b7dd Remove C++11 which also simplifies Windows port 2018-06-14 11:41:28 +02:00
Henrik Rusche
b23dfb3284 Fixing compilation on MSWindows 2018-06-13 10:48:01 +02:00
Hrvoje Jasak
72854eb5dc Fix comment 2018-06-11 15:35:47 +01:00
Vuko Vukcevic
3d6293352a Bugfix in fixedHeatFluxTemperature BC 
1. Reading in gradient from dictionary if present,
2. No need to distinguish between RAS and LES models: use turbulenceModel
   instead.
 2018-06-11 14:23:48 +02:00
Vuko Vukcevic
27e5ca1f6b Bugfix in fixedHeatFluxTemperature BC 
Forgot that I need to divide the heat flux with reference density and specific
heat capacity to get the gradient...
 2018-06-11 13:16:17 +02:00
Henrik Rusche
58290b37f5 BUGFIX: Mess in dlTables and use of OSspecific 2018-06-06 22:19:19 +02:00
Henrik Rusche
6ffa6e9cb4 BUGFIX: Re-enable FO's movePoints 2018-06-06 17:57:35 +02:00
Henrik Rusche
6eb6f12071 Merge /u/henrus/foam-extend-4.0/ branch bugfix/swak4foam into nextRelease 
https://sourceforge.net/p/foam-extend/foam-extend-4.0/merge-requests/54/
 2018-06-06 12:35:52 +00:00
Hrvoje Jasak
2adfc6bd00 Bugfix: limited on boundary non-orthogonality in laplacian 2018-06-05 11:53:37 +01:00
Vuko Vukcevic
c681206a94 fixedHeatFluxTemperature boundary condition 
The boundary condition uses a specified heat flux and kappe effective to
calculate the temperature gradient. It is a part of LES library in order to
allow both RAS and LES models to use the BC.
 2018-06-05 09:17:07 +02:00
Henrik Rusche
2874c5e775 Enables OpenMP support for cfMesh in cmake-build 2018-06-01 19:35:39 +02:00
Hrvoje Jasak
b365dab574 Added readPatchType function to capture the patch type for patch fields which circumvent base class dictionary constructor 2018-06-01 17:29:59 +01:00
Henrik Rusche
fc7de48319 Removing trailing whitespace, tabs and DOS CR & Fixing some indentation 2018-06-01 18:17:04 +02:00
Henrik Rusche
4b4be75c2b Upgrade copyright notices & banner in source code 2018-06-01 18:11:37 +02:00
Henrik Rusche
1ef48646b9 Merge branch 'feature/cmake' into nextRelease 2018-06-01 18:03:24 +02:00
Henrik Rusche
7b6ce1ff7c Enable overset & Patched up more tutorials for CMake build 2018-06-01 17:59:13 +02:00