Added support for multiple modules at a time and exclude pattern.
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5d51934894
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1 changed files with 90 additions and 54 deletions
144
check_modules.sh
144
check_modules.sh
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@ -1,24 +1,46 @@
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#!/bin/bash -l
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#
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# Copyright (c) 2012-2015 Christoph Niethammer <niethammer@hlrs.de>
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# Copyright (c) 2012-2016 Christoph Niethammer <niethammer@hlrs.de>
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#
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# Script checking the module environment for problems during module loading/unloading
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#
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# Usage:
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# check_modules.sh [MODULE]
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#
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# Options:
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# MODULE May be any valid module path as used for 'module avail [MODULE]'
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#
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function print_usage() {
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echo <<EOT
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Script checking the module environment for problems during module loading/unloading
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usage: $0 [MODULE_PATTERN] [--exclude PATTERN]"
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EOT
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}
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# Command line options:
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moduleclass=$1 # check only subset of modules
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declare -a moduleclasses # check only subset of modules
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declare -a exclude_pattern # exclude modules with given pattern, e.g. nightly builds
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while [[ $# -gt 0 ]]
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do
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key="$1"
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case $key in
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--exclude-pattern|--exclude)
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exclude_patterns+=($2)
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shift 2
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;;
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-h|--help)
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print_usage
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exit 0
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;;
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*)
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moduleclasses+=($1)
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shift
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;;
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esac
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done
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# definitions for esear color output to display
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Color_Off='\e[0m' # Text Reset
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IGreen='\e[0;92m' # Intense Green
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IRed='\e[0;91m' # Intense Red
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echo Moduleclasses: ${moduleclasses[@]}
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echo Exclude: ${exclude_patterns[@]}
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# intermediate files, logfiles
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LOGDIR=${LOGDIR:=$PWD}
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tmpdir=/tmp/check_modules-$USER
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@ -48,60 +70,74 @@ echo "Environment:" >> $logfile
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cat $module_clean_env_file >> $logfile
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echo "--------------------" >> $logfile
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for m_original in $(module av -t $moduleclass 2>&1); do
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if [[ $m_original =~ ^[A-Za-z] ]]; then # skip any non module line in output
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m=$(echo $m_original | sed -e 's/(.*)//') # Remove aliases e.g. (default)
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echo -n "Checking $m_original ... "
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echo "Checking $m_original ... " >> $logfile
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for moduleclass in ${moduleclasses[@]}
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do
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for m_original in $(module av -t $moduleclass 2>&1); do
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match=0
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for exclude_pattern in ${exclude_patterns[@]}
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do
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if [[ "$m_original" =~ "$exclude_pattern" ]]; then
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echo MATCH: $exclude_pattern
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match=1
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fi
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done
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if [ $match == 1 ]; then
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continue
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fi
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if [[ $m_original =~ ^[A-Za-z] ]]; then # skip any non module line in output
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m=$(echo $m_original | sed -e 's/(.*)//') # Remove aliases e.g. (default)
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echo -n "Checking $m_original ... "
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echo "Checking $m_original ... " >> $logfile
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cmd="module load $m"
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echo $cmd >> $logfile
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$cmd > $module_load_logfile 2>&1
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cat $module_load_logfile >> $logfile
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module li >>$logfile 2>&1
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# check if module was loaded and did not report errors during loading
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if module li -t 2>&1 | grep $m >/dev/null && ! grep ERROR $module_load_logfile >/dev/null ; then
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cmd="module rm $m"
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cmd="module load $m"
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echo $cmd >> $logfile
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$cmd > $module_rm_logfile 2>&1
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cat $module_rm_logfile >> $logfile
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$cmd > $module_load_logfile 2>&1
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cat $module_load_logfile >> $logfile
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module li >>$logfile 2>&1
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# check if module was unloaded
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if module li -t 2>&1 | grep $m > /dev/null; then
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echo -e "${IRed}unloading failed${Color_Off}"
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echo "ERROR: unloading module '$m' failed" >> $logfile
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failed_modules=(${failed_modules[@]} $m_original)
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# check if module was loaded and did not report errors during loading
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if module li -t 2>&1 | grep $m >/dev/null && ! grep ERROR $module_load_logfile >/dev/null ; then
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cmd="module rm $m"
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echo $cmd >> $logfile
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$cmd > $module_rm_logfile 2>&1
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cat $module_rm_logfile >> $logfile
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module li >>$logfile 2>&1
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# check if module was unloaded
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if module li -t 2>&1 | grep $m > /dev/null; then
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echo -e "${IRed}unloading failed${Color_Off}"
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echo "ERROR: unloading module '$m' failed" >> $logfile
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failed_modules=(${failed_modules[@]} $m_original)
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else
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echo -e "${IGreen}success${Color_Off}"
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echo "SUCCESS" >> $logfile
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fi
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else
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echo -e "${IGreen}success${Color_Off}"
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echo "SUCCESS" >> $logfile
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echo -e "${IRed}loading failed${Color_Off}"
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echo "ERROR: loading module '$m' failed" >> $logfile
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failed_modules=(${failed_modules[@]} $m)
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fi
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else
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echo -e "${IRed}loading failed${Color_Off}"
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echo "ERROR: loading module '$m' failed" >> $logfile
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failed_modules=(${failed_modules[@]} $m)
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# clean up module environment
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cmd="module purge"
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echo $cmd >> $logfile
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$cmd >>$logfile 2>&1
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module li >>$logfile 2>&1
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echo "Resetting environment ..." >>$logfile
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# Reset the complete environment manually to overcome problems with
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# inconsistent internal caches of the module command after module purge.
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source $module_clean_env_file 2>/dev/null
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# clean up intermediate files
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rm -f $module_load_logfile
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rm -f $module_rm_logfile
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echo >>$logfile 2>&1
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fi
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# clean up module environment
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cmd="module purge"
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echo $cmd >> $logfile
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$cmd >>$logfile 2>&1
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module li >>$logfile 2>&1
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echo "Resetting environment ..." >>$logfile
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# Reset the complete environment manually to overcome problems with
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# inconsistent internal caches of the module command after module purge.
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source $module_clean_env_file 2>/dev/null
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# clean up intermediate files
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rm -f $module_load_logfile
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rm -f $module_rm_logfile
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echo >>$logfile 2>&1
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fi
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done
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done
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# clean up file storing the initial environment
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