scripts for new versions of numlib packages
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Elke Flehmig
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6 changed files with 184 additions and 0 deletions
48
packages/numlib/metis/5.1.0
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48
packages/numlib/metis/5.1.0
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#!/bin/sh
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# sit class file
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#
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# Christoph Niethammer <niethammer@hlrs.de> (C) 2012
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#
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CATEGORY="numlib"
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PACKAGE="metis"
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VERSION="5.1.0"
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URL="http://glaros.dtc.umn.edu/gkhome/metis/metis/overview"
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INSTALLER="Elke Flehmig <flehmig@hlrs.de>"
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# cmake 2.8 or higher is required
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case $PLATFORM in
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hermit|hermit1)
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module load tools/cmake/2.8.10
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module swap PrgEnv-cray PrgEnv-gnu
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;;
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laki)
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module load tools/cmake/2.8.11.1
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;;
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esac
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# Archive A and package name P
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A=${PACKAGE}-${VERSION}.tar.gz
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P=${PACKAGE}-${VERSION}
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BUILDDIR=$SRCDIR
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src_prepare() {
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# set 64bit width for elementary data types
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sit_info "patching metis.h with 64bit width"
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cd $SRCDIR/include
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patch metis.h < $SRC_POOL/5.1.0_metis.h_patch
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}
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src_configure() {
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make config prefix=$PREFIX
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}
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src_install() {
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make install
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# mv manual to target (not included in make install)
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sit_info "Installing manual"
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cd $SRCDIR/manual; mv manual.pdf $PREFIX
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}
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8
packages/numlib/metis/5.1.0_metis.h_patch
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8
packages/numlib/metis/5.1.0_metis.h_patch
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33c33
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< #define IDXTYPEWIDTH 32
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---
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> #define IDXTYPEWIDTH 64
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43c43
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< #define REALTYPEWIDTH 32
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---
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> #define REALTYPEWIDTH 64
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55
packages/numlib/parmetis/4.0.3
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packages/numlib/parmetis/4.0.3
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#!/bin/sh
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# sit class file
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#
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# Christoph Niethammer <niethammer@hlrs.de> (C) 2012
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#
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CATEGORY="numlib"
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PACKAGE="parmetis"
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VERSION="4.0.3"
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URL="http://glaros.dtc.umn.edu/gkhome/metis/parmetis/download"
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INSTALLER="Elke Flehmig <flehmig@hlrs.de>"
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# cmake 2.8 or higher is required
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case $PLATFORM in
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hermit|hermit1)
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module load tools/cmake/2.8.10
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;;
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laki)
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module load tools/cmake/2.8.11.1
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;;
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esac
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# Archive A and package name P
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A=${PACKAGE}-${VERSION}.tar.gz
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P=${PACKAGE}-${VERSION}
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BUILDDIR=$SRCDIR
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src_prepare() {
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# set 64bit width for elementary data types
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sit_info "patching metis.h with 64bit width"
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cd $SRCDIR/metis/include
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patch metis.h < $SRC_POOL/4.0.3_metis.h_patch
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# on cray, replace mpicc and mpicxx with cray mpi compiler commands
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case $PLATFORM in
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hermit|hermit1)
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sit_info "patching Makefile with cray mpi compiler on hermit"
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cd $SRCDIR
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patch Makefile < $SRC_POOL/4.0.3_Makefile_patch_cray
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;;
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esac
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}
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src_configure() {
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make config prefix=$PREFIX
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}
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src_install() {
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make install
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# mv manual to target (not included in make install)
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sit_info "Installing manual"
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cd $SRCDIR/manual; mv manual.pdf $PREFIX
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}
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6
packages/numlib/parmetis/4.0.3_Makefile_patch_cray
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6
packages/numlib/parmetis/4.0.3_Makefile_patch_cray
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11,12c11,12
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< cc = mpicc
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< cxx = mpicxx
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---
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> cc = cc
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> cxx = CC
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8
packages/numlib/parmetis/4.0.3_metis.h_patch
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8
packages/numlib/parmetis/4.0.3_metis.h_patch
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33c33
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< #define IDXTYPEWIDTH 32
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---
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> #define IDXTYPEWIDTH 64
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43c43
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< #define REALTYPEWIDTH 32
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---
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> #define REALTYPEWIDTH 64
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59
packages/numlib/petsc/3.4.0
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packages/numlib/petsc/3.4.0
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#!/bin/sh
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# sit class file
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#
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# Christoph Niethammer <niethammer@hlrs.de> (C) 2012
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#
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CATEGORY="numlib"
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PACKAGE="petsc"
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VERSION="3.4.0"
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URL="http://www.mcs.anl.gov/petsc/"
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INSTALLER="Elke Flehmig <flehmig@hlrs.de>"
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#module load tools/cmake/2.8.11.1
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# Archive A and package name P
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A=${PACKAGE}-${VERSION}.tar.gz
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P=${PACKAGE}-${VERSION}
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# our petsc default config: 32bit real double precision
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# blas_lapack: with intel compiler, use intel's mkl instead
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case $COMPILER in
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gnu)
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ARCH=linux-gnu
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BLAS_LAPACK="--download-f-blas-lapack=$SRC_POOL/fblaslapack-3.1.1.tar.gz"
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;;
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intel)
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ARCH=linux-gnu-intel
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module load numlib/intel/mkl/11.0
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BLAS_LAPACK="--with-blas-lapack-dir=/opt/compiler/intel/composer_xe_2013-2-146/composer_xe_2013/mkl/lib/intel64"
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;;
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esac
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# Other interesting configure options:
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# --enable-mpi-threads
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# --enable-progress-threads
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CONFIGURE_OPTS="
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--CC=$MPICC --CXX=$MPICXX --FC=$MPIFC \
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--with-mpiexec=mpirun \
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PETSC_ARCH=$ARCH \
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--with-clanguage=cxx \
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--with-c-support \
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--with-fortran-datatypes=1 \
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$BLAS_LAPACK \
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"
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# default is make -j, which doesn't work here!
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#(petsc automatically builds parallel)
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MAKEOPTS=""
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BUILDDIR=$SRCDIR
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src_prepare() {
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export PETSC_DIR=${SRCDIR}
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}
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src_pretest() {
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make PETSC_DIR=$SRCDIR PETSC_ARCH=$ARCH test
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}
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