106 lines
2.7 KiB
Bash
106 lines
2.7 KiB
Bash
|
#!/bin/bash
|
||
|
|
|
||
|
|
set -e
|
||
|
|
|
||
|
|
. /etc/profile.d/module.sh
|
||
|
|
|
||
|
|
TARFILE="hdf5-$1-patch1.tar.bz2"
|
||
|
|
EXTRDIR="hdf5-$1-patch1"
|
||
|
|
VERSION="$1"
|
||
|
|
GNUVERSION="$2"
|
||
|
|
MPIVERSION="$3"
|
||
|
|
|
||
|
|
INSTALLDIR="/opt/tools/hdf5"
|
||
|
|
|
||
|
|
MODULEDIR="/opt/tools/hdf5/modulefiles"
|
||
|
|
MODULEFILE="$VERSION-openmpi-$MPIVERSION-gnu-$GNUVERSION"
|
||
|
|
|
||
|
|
if [ "$1" = "" -o "$2" = "" -o "$3" = "" ]; then
|
||
|
|
echo "error: missing version number" 1>&2
|
||
|
|
exit 1
|
||
|
|
fi
|
||
|
|
if [ ! -e "$TARFILE" ]; then
|
||
|
|
echo "error: file '$TARFILE' not found" 1>&2
|
||
|
|
exit 2
|
||
|
|
fi
|
||
|
|
|
||
|
|
if [ ! -e "$EXTRDIR" ]; then
|
||
|
|
mkdir -p "$EXTRDIR"
|
||
|
|
tar --bzip2 -xvf hdf5-1.8.15-patch1.tar.bz2
|
||
|
|
#tar --bzip2 -xvf "$EXTRDIR" -f "$TARFILE"
|
||
|
|
fi
|
||
|
|
cd "$EXTRDIR" || exit 1
|
||
|
|
|
||
|
|
############################################################################
|
||
|
|
|
||
|
|
## installation
|
||
|
|
umask 002
|
||
|
|
|
||
|
|
module load compiler/gnu/$GNUVERSION
|
||
|
|
module load mpi/openmpi/$MPIVERSION-gnu-$GNUVERSION
|
||
|
|
module list 2> ../mod_gnu
|
||
|
|
|
||
|
|
export > ../gnu_env
|
||
|
|
|
||
|
|
CC=mpicc FC=mpif90 CXX=mpicxx ./configure --with-zlib=/opt/tools/zlib/1.2.8 --prefix=/sw/laki-SL6x/hlrs/tools/hdf5/$VERSION-openmpi-$MPIVERSION-gnu-$GNUVERSION/ --enable-parallel --enable-fortran --enable-fortran2003
|
||
|
|
##configure: error: --enable-cxx and --enable-parallel flags are incompatible.
|
||
|
|
make
|
||
|
|
make install
|
||
|
|
make installcheck > ../installcheck.log
|
||
|
|
make clean
|
||
|
|
|
||
|
|
cd ..
|
||
|
|
rm -rf "$EXTRDIR"
|
||
|
|
echo "ende installation"
|
||
|
|
#########################################################################
|
||
|
|
##########################MODULEFILES####################################
|
||
|
|
cd "$MODULEDIR" || exit 1
|
||
|
|
|
||
|
|
cat >"$MODULEFILE" <<EOF
|
||
|
|
#%Module
|
||
|
|
#
|
||
|
|
# Module: tools/hdf5/$MODULEFILE
|
||
|
|
#
|
||
|
|
|
||
|
|
set version $VERSION-openmpi-$MPIVERSION-gnu-$GNUVERSION
|
||
|
|
set base $INSTALLDIR/\$version
|
||
|
|
set compiler gnu
|
||
|
|
set compversion $GNUVERSION
|
||
|
|
set mpipath mpi/openmpi/$MPIVERSION-gnu-$GNUVERSION
|
||
|
|
|
||
|
|
prepend-path CPATH \$base/include
|
||
|
|
prepend-path PATH \$base/bin
|
||
|
|
prepend-path LD_LIBRARY_PATH \$base/lib
|
||
|
|
append-path INCLUDE \$base/include
|
||
|
|
append-path MANPATH \$base/share/man
|
||
|
|
|
||
|
|
conflict tools/hdf5
|
||
|
|
|
||
|
|
module-whatis "HDF5 (Hierarchical Data Format) version \$version"
|
||
|
|
|
||
|
|
proc ModulesHelp { } {
|
||
|
|
global version base
|
||
|
|
|
||
|
|
puts stderr ""
|
||
|
|
puts stderr "HDF5 (Hierarchical Data Format) version \$version"
|
||
|
|
puts stderr ""
|
||
|
|
}
|
||
|
|
|
||
|
|
if { [module-info mode] == "load"
|
||
|
|
|| [module-info mode] == "show"
|
||
|
|
|| [module-info mode] == "display" } {
|
||
|
|
if { ! [is-loaded compiler/\$compiler/\$compversion] } {
|
||
|
|
if { [is-loaded compiler/\$compiler] } {
|
||
|
|
module unload compiler/\$compiler
|
||
|
|
}
|
||
|
|
module load compiler/\$compiler/\$compversion
|
||
|
|
}
|
||
|
|
if { ! [is-loaded \$mpipath] } {
|
||
|
|
if { [is-loaded mpi/openmpi] } {
|
||
|
|
module unload mpi/openmpi
|
||
|
|
}
|
||
|
|
module load \$mpipath
|
||
|
|
}
|
||
|
|
}
|
||
|
|
EOF
|