spack/.github/workflows/unit_tests.yaml
Todd Gamblin d45674c1cb
Spack can Use RHEL8's platform-python if nothing else is available. (#23857)
This adds RHEL8's `/usr/libexec/platform-python` to Spack's list of preferred
pythons. It will only be used if no other `python` is available in the `PATH`.

We have been testing with this python for a while now, and it seems to do all
that we need. If Spack one day isn't able to work with it, we'll take it out,
but for now it is useful to allow Spack to be used on RHEL8 without a dedicated
`python` installation.
2021-05-22 15:35:07 -07:00

389 lines
14 KiB
YAML

name: linux tests
on:
push:
branches:
- develop
- releases/**
pull_request:
branches:
- develop
- releases/**
jobs:
# Validate that the code can be run on all the Python versions
# supported by Spack
validate:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install Python Packages
run: |
pip install --upgrade pip
pip install --upgrade vermin
- name: vermin (Spack's Core)
run: vermin --backport argparse --backport typing -t=2.6- -t=3.5- -v lib/spack/spack/ lib/spack/llnl/ bin/
- name: vermin (Repositories)
run: vermin --backport argparse --backport typing -t=2.6- -t=3.5- -v var/spack/repos
# Run style checks on the files that have been changed
style:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools flake8 mypy>=0.800 black
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
git --version
. .github/workflows/setup_git.sh
- name: Run style tests
run: |
share/spack/qa/run-style-tests
# Build the documentation
documentation:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install System packages
run: |
sudo apt-get -y update
sudo apt-get install -y coreutils ninja-build graphviz
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools
pip install --upgrade -r lib/spack/docs/requirements.txt
- name: Build documentation
run: |
share/spack/qa/run-doc-tests
# Check which files have been updated by the PR
changes:
runs-on: ubuntu-latest
# Set job outputs to values from filter step
outputs:
core: ${{ steps.filter.outputs.core }}
packages: ${{ steps.filter.outputs.packages }}
with_coverage: ${{ steps.coverage.outputs.with_coverage }}
steps:
- uses: actions/checkout@v2
if: ${{ github.event_name == 'push' }}
with:
fetch-depth: 0
# For pull requests it's not necessary to checkout the code
- uses: dorny/paths-filter@v2
id: filter
with:
# See https://github.com/dorny/paths-filter/issues/56 for the syntax used below
filters: |
core:
- './!(var/**)/**'
packages:
- 'var/**'
# Some links for easier reference:
#
# "github" context: https://docs.github.com/en/actions/reference/context-and-expression-syntax-for-github-actions#github-context
# job outputs: https://docs.github.com/en/actions/reference/workflow-syntax-for-github-actions#jobsjob_idoutputs
# setting environment variables from earlier steps: https://docs.github.com/en/actions/reference/workflow-commands-for-github-actions#setting-an-environment-variable
#
- id: coverage
# Run the subsequent jobs with coverage if core has been modified,
# regardless of whether this is a pull request or a push to a branch
run: |
echo Core changes: ${{ steps.filter.outputs.core }}
echo Event name: ${{ github.event_name }}
if [ "${{ steps.filter.outputs.core }}" == "true" ]
then
echo "::set-output name=with_coverage::true"
else
echo "::set-output name=with_coverage::false"
fi
# Run unit tests with different configurations on linux
unittests:
needs: [ validate, style, documentation, changes ]
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [2.7, 3.5, 3.6, 3.7, 3.8, 3.9]
concretizer: ['original', 'clingo']
steps:
- uses: actions/checkout@v2
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install System packages
run: |
sudo apt-get -y update
# Needed for unit tests
sudo apt-get install -y coreutils gfortran graphviz gnupg2 mercurial
sudo apt-get install -y ninja-build patchelf
# Needed for kcov
sudo apt-get -y install cmake binutils-dev libcurl4-openssl-dev
sudo apt-get -y install zlib1g-dev libdw-dev libiberty-dev
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools codecov coverage
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
git --version
. .github/workflows/setup_git.sh
- name: Install kcov for bash script coverage
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
env:
KCOV_VERSION: 34
run: |
KCOV_ROOT=$(mktemp -d)
wget --output-document=${KCOV_ROOT}/${KCOV_VERSION}.tar.gz https://github.com/SimonKagstrom/kcov/archive/v${KCOV_VERSION}.tar.gz
tar -C ${KCOV_ROOT} -xzvf ${KCOV_ROOT}/${KCOV_VERSION}.tar.gz
mkdir -p ${KCOV_ROOT}/build
cd ${KCOV_ROOT}/build && cmake -Wno-dev ${KCOV_ROOT}/kcov-${KCOV_VERSION} && cd -
make -C ${KCOV_ROOT}/build && sudo make -C ${KCOV_ROOT}/build install
- name: Bootstrap clingo from sources
if: ${{ matrix.concretizer == 'clingo' }}
run: |
. share/spack/setup-env.sh
spack external find --not-buildable cmake bison
spack -v solve zlib
- name: Run unit tests (full suite with coverage)
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
env:
COVERAGE: true
SPACK_TEST_SOLVER: ${{ matrix.concretizer }}
run: |
share/spack/qa/run-unit-tests
coverage combine
coverage xml
- name: Run unit tests (reduced suite without coverage)
if: ${{ needs.changes.outputs.with_coverage == 'false' }}
env:
ONLY_PACKAGES: true
SPACK_TEST_SOLVER: ${{ matrix.concretizer }}
run: |
share/spack/qa/run-unit-tests
- uses: codecov/codecov-action@v1
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
with:
flags: unittests,linux,${{ matrix.concretizer }}
# Test shell integration
shell:
needs: [ validate, style, documentation, changes ]
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install System packages
run: |
sudo apt-get -y update
# Needed for shell tests
sudo apt-get install -y coreutils csh zsh tcsh fish dash bash
# Needed for kcov
sudo apt-get -y install cmake binutils-dev libcurl4-openssl-dev
sudo apt-get -y install zlib1g-dev libdw-dev libiberty-dev
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools codecov coverage
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
git --version
. .github/workflows/setup_git.sh
- name: Install kcov for bash script coverage
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
env:
KCOV_VERSION: 38
run: |
KCOV_ROOT=$(mktemp -d)
wget --output-document=${KCOV_ROOT}/${KCOV_VERSION}.tar.gz https://github.com/SimonKagstrom/kcov/archive/v${KCOV_VERSION}.tar.gz
tar -C ${KCOV_ROOT} -xzvf ${KCOV_ROOT}/${KCOV_VERSION}.tar.gz
mkdir -p ${KCOV_ROOT}/build
cd ${KCOV_ROOT}/build && cmake -Wno-dev ${KCOV_ROOT}/kcov-${KCOV_VERSION} && cd -
make -C ${KCOV_ROOT}/build && sudo make -C ${KCOV_ROOT}/build install
- name: Run shell tests (without coverage)
if: ${{ needs.changes.outputs.with_coverage == 'false' }}
run: |
share/spack/qa/run-shell-tests
- name: Run shell tests (with coverage)
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
env:
COVERAGE: true
run: |
share/spack/qa/run-shell-tests
- uses: codecov/codecov-action@v1
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
with:
flags: shelltests,linux
# Test for Python2.6 run on Centos 6
centos6:
needs: [ validate, style, documentation, changes ]
runs-on: ubuntu-latest
container: spack/github-actions:centos6
steps:
- name: Run unit tests (full test-suite)
# The CentOS 6 container doesn't run with coverage, but
# under the same conditions it runs the full test suite
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
env:
HOME: /home/spack-test
run: |
whoami && echo $HOME && cd $HOME
git clone https://github.com/spack/spack.git && cd spack
git fetch origin ${{ github.ref }}:test-branch
git checkout test-branch
share/spack/qa/run-unit-tests
- name: Run unit tests (only package tests)
if: ${{ needs.changes.outputs.with_coverage == 'false' }}
env:
HOME: /home/spack-test
ONLY_PACKAGES: true
run: |
whoami && echo $HOME && cd $HOME
git clone https://github.com/spack/spack.git && cd spack
git fetch origin ${{ github.ref }}:test-branch
git checkout test-branch
share/spack/qa/run-unit-tests
# Test RHEL8 UBI with platform Python. This job is run
# only on PRs modifying core Spack
rhel8-platform-python:
needs: [ validate, style, documentation, changes ]
runs-on: ubuntu-latest
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
container: registry.access.redhat.com/ubi8/ubi
steps:
- name: Install dependencies
run: |
dnf install -y \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
make patch tcl unzip which xz
- uses: actions/checkout@v2
- name: Setup repo and non-root user
run: |
git --version
git fetch --unshallow
. .github/workflows/setup_git.sh
useradd spack-test
chown -R spack-test .
- name: Run unit tests
shell: runuser -u spack-test -- bash {0}
run: |
source share/spack/setup-env.sh
spack unit-test -k 'not svn and not hg' -x --verbose
# Test for the clingo based solver (using clingo-cffi)
clingo-cffi:
needs: [ validate, style, documentation, changes ]
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: 3.9
- name: Install System packages
run: |
sudo apt-get -y update
# Needed for unit tests
sudo apt-get install -y coreutils gfortran graphviz gnupg2 mercurial
sudo apt-get install -y ninja-build patchelf
# Needed for kcov
sudo apt-get -y install cmake binutils-dev libcurl4-openssl-dev
sudo apt-get -y install zlib1g-dev libdw-dev libiberty-dev
- name: Install kcov for bash script coverage
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
env:
KCOV_VERSION: 34
run: |
KCOV_ROOT=$(mktemp -d)
wget --output-document=${KCOV_ROOT}/${KCOV_VERSION}.tar.gz https://github.com/SimonKagstrom/kcov/archive/v${KCOV_VERSION}.tar.gz
tar -C ${KCOV_ROOT} -xzvf ${KCOV_ROOT}/${KCOV_VERSION}.tar.gz
mkdir -p ${KCOV_ROOT}/build
cd ${KCOV_ROOT}/build && cmake -Wno-dev ${KCOV_ROOT}/kcov-${KCOV_VERSION} && cd -
make -C ${KCOV_ROOT}/build && sudo make -C ${KCOV_ROOT}/build install
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools codecov coverage clingo
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
git --version
. .github/workflows/setup_git.sh
- name: Run unit tests (full suite with coverage)
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
env:
COVERAGE: true
SPACK_TEST_SOLVER: clingo
run: |
share/spack/qa/run-unit-tests
coverage combine
coverage xml
- name: Run unit tests (reduced suite without coverage)
if: ${{ needs.changes.outputs.with_coverage == 'false' }}
env:
ONLY_PACKAGES: true
SPACK_TEST_SOLVER: clingo
run: |
share/spack/qa/run-unit-tests
- uses: codecov/codecov-action@v1
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
with:
flags: unittests,linux,clingo
# Run unit tests on MacOS
build:
needs: [ validate, style, documentation, changes ]
runs-on: macos-latest
strategy:
matrix:
python-version: [3.8]
steps:
- uses: actions/checkout@v2
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools
pip install --upgrade codecov coverage
pip install --upgrade flake8 pep8-naming mypy
- name: Setup Homebrew packages
run: |
brew install dash fish gcc gnupg2 kcov
- name: Run unit tests
run: |
git --version
. .github/workflows/setup_git.sh
. share/spack/setup-env.sh
if [ "${{ needs.changes.outputs.with_coverage }}" == "true" ]
then
coverage run $(which spack) unit-test -x
coverage combine
coverage xml
else
echo "ONLY PACKAGE RECIPES CHANGED [skipping coverage]"
$(which spack) unit-test -x -m "not maybeslow" -k "package_sanity"
fi
- uses: codecov/codecov-action@v1
if: ${{ needs.changes.outputs.with_coverage == 'true' }}
with:
file: ./coverage.xml
flags: unittests,macos