Clone of the official spack repository with modifications for HLRS HAWK
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Barry Britt c0a52cc59e Updating bamtools to include a dependency for zlib. (#4031)
* Updating bamtools to include a dependency for zlib.

In a standard compile, bamtools will fail if zlib headers are not installed on the target machine. In order to maintain compatibility with all systems -- and since zlib is included already as a dependency for cmake -- this patch adds zlib as a link dependency for the bamtools package.

* Modified cmake rpath include.

Bamtools has a non-standard library location, so we need to append $prefix/lib/bamtools to the rpath. Not sure there's a better way to do this...

* Fixing syntax error in package.py

Fixed a non-terminated parenthesis on line 46.

* Updated bamtools to be a CMakePackage

Removed extraneous code, and altered the package to extend cmake_args
including the non-standard library location.

* UpRemoving cmake dependency and removing blank line from end of file

* Updates to cmake_args.

Removed the duplicate definition of std_cmake_args in favor of simply overriding the CMAKE_INSTALL_RPATH variable that is provided. This should allow the package to be linked correctly to itself.
2017-05-06 12:05:12 -05:00
bin spack: no stacktrace if not in debug mode + fix emacs variant (#4098) 2017-05-03 06:21:37 +02:00
etc/spack/defaults Allow users to set parallel jobs in config.yaml (#3812) 2017-04-15 08:31:00 -07:00
lib/spack Remind developers to update tab completion script (#4148) 2017-05-05 18:52:28 -05:00
share/spack bash completion: fixed invalid identifier (#4079) 2017-05-03 08:12:33 -05:00
var/spack Updating bamtools to include a dependency for zlib. (#4031) 2017-05-06 12:05:12 -05:00
.codecov.yml qa: adjust thresholds for acceptance (#3105) 2017-02-09 08:31:57 -08:00
.coveragerc unit tests: replace nose with pytest (#2502) 2016-12-29 07:48:48 -08:00
.flake8 Properly ignore flake8 F811 redefinition errors (#3932) 2017-04-25 11:01:25 -07:00
.gitignore unit tests: replace nose with pytest (#2502) 2016-12-29 07:48:48 -08:00
.mailmap Update mail map. So many email aliases. 2016-10-19 22:47:39 -07:00
.travis.yml Separate integration tests; simplify test scripts (#4006) 2017-04-27 11:47:56 -07:00
LICENSE Correct LLNL LGPL license template for clarity. 2016-05-11 21:22:25 -07:00
pytest.ini unit tests: replace nose with pytest (#2502) 2016-12-29 07:48:48 -08:00
README.md Spack works with Python 3 2017-03-31 13:40:41 -07:00

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Spack is a package management tool designed to support multiple versions and configurations of software on a wide variety of platforms and environments. It was designed for large supercomputing centers, where many users and application teams share common installations of software on clusters with exotic architectures, using libraries that do not have a standard ABI. Spack is non-destructive: installing a new version does not break existing installations, so many configurations can coexist on the same system.

Most importantly, Spack is simple. It offers a simple spec syntax so that users can specify versions and configuration options concisely. Spack is also simple for package authors: package files are written in pure Python, and specs allow package authors to write a single build script for many different builds of the same package.

See the Feature Overview for examples and highlights.

To install spack and install your first package, make sure you have Python (2 or 3). Then:

$ git clone https://github.com/llnl/spack.git
$ cd spack/bin
$ ./spack install libelf

Documentation

Full documentation for Spack is the first place to look.

We've also got a Spack 101 Tutorial, so you can learn Spack yourself, or teach users at your own site.

See also:

Get Involved!

Spack is an open source project. Questions, discussion, and contributions are welcome. Contributions can be anything from new packages to bugfixes, or even new core features.

Mailing list

If you are interested in contributing to spack, the first step is to join the mailing list. We're using a Google Group for this, and you can join it here:

Contributions

Contributing to Spack is relatively easy. Just send us a pull request. When you send your request, make develop the destination branch on the Spack repository.

Your PR must pass Spack's unit tests and documentation tests, and must be PEP 8 compliant. We enforce these guidelines with Travis CI. To run these tests locally, and for helpful tips on git, see our Contribution Guide.

Spack uses a rough approximation of the Git Flow branching model. The develop branch contains the latest contributions, and master is always tagged and points to the latest stable release.

Authors

Many thanks go to Spack's contributors.

Spack was originally written by Todd Gamblin, tgamblin@llnl.gov.

Citing Spack

If you are referencing Spack in a publication, please cite the following paper:

Release

Spack is released under an LGPL license. For more details see the LICENSE file.

LLNL-CODE-647188