spack/var/spack/repos/builtin/packages/samtools/samtools1.2.patch
Todd Gamblin 89d5127900 New, cleaner package repository structure.
Package repositories now look like this:

    top-level-dir/
        repo.yaml
        packages/
            libelf/
                package.py
            mpich/
                package.py
            ...

This leaves room at the top level for additional metadata, source,
per-repo configs, indexes, etc., and it makes it easy to see that
something is a spack repo (just look for repo.yaml and packages).
2015-11-26 14:19:27 -08:00

20 lines
768 B
Diff

--- Makefile 2015-02-03 08:27:34.000000000 -0800
+++ Makefile.new 2015-07-21 10:38:27.881406892 -0700
@@ -26,7 +26,7 @@
CFLAGS = -g -Wall -O2
LDFLAGS =
LDLIBS =
-DFLAGS= -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_CURSES_LIB=1
+DFLAGS= -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_CURSES_LIB=0
LOBJS= bam_aux.o bam.o bam_import.o sam.o \
sam_header.o bam_plbuf.o
AOBJS= bam_index.o bam_plcmd.o sam_view.o \
@@ -37,7 +37,7 @@
faidx.o stats.o stats_isize.o bam_flags.o bam_split.o \
bam_tview.o bam_tview_curses.o bam_tview_html.o bam_lpileup.o
INCLUDES= -I. -I$(HTSDIR)
-LIBCURSES= -lcurses # -lXCurses
+#LIBCURSES= -lcurses # -lXCurses
prefix = /usr/local
exec_prefix = $(prefix)