Commit graph

24776 commits

Author SHA1 Message Date
vsoch
4208cf66be spack style: automatically bootstrap dependencies
This uses our bootstrapping logic to automatically install dependencies for
`spack style`. Users should no longer have to pre-install all of the tools
(`isort`, `mypy`, `black`, `flake8`). The command will do it for them.

- [x] add logic to bootstrap specs with specific version requirements in `spack style`
- [x] remove style tools from CI requirements (to ensure we test bootstrapping)
- [x] rework dependencies for `mypy` and `py-typed-ast`
      - `py-typed-ast` needs to be a link dependency
      - it needs to be at 1.4.1 or higher to work with python 3.9

Signed-off-by: vsoch <vsoch@users.noreply.github.com>
2021-07-24 07:07:35 -07:00
Massimiliano Culpo
a30e6c6158
Bump codecov/action to v2.0.2 (#24983)
* build(deps): bump codecov/codecov-action from 1 to 2.0.1

Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 1 to 2.0.1.
- [Release notes](https://github.com/codecov/codecov-action/releases)
- [Changelog](https://github.com/codecov/codecov-action/blob/master/CHANGELOG.md)
- [Commits](https://github.com/codecov/codecov-action/compare/v1...v2.0.1)

---
updated-dependencies:
- dependency-name: codecov/codecov-action
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>

* Update arguments to codecov action

* Try to delete the symbolic link to root folder

Hopefully this should get rid of the ELOOP error

* Delete also for shell tests and MacOS

* Bump to v2.0.2

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-07-24 07:23:56 -04:00
Paul Kuberry
bb20cadd91
Only add hwloc to tpl/dep list for certain versions of Trilinos (#25071) 2021-07-24 07:20:51 -04:00
iarspider
0beb35e426
Added versions of py-grpcio upto 1.39.0 (#25056)
Tested only `py-grpcio@1.39.0 ^grpcio@1.39.0`
2021-07-23 21:42:32 -05:00
Filippo Spiga
25c09e7a56
nvhpc: add v21.7 (#25040) 2021-07-23 09:10:50 +00:00
iarspider
e083d32f10
Add grpc upto 1.39.0 and update dependencies (#25037) 2021-07-23 08:58:56 +00:00
Dylan Simon
7b0d869c3c
pgplot: fix with gcc<10 (#25042) 2021-07-23 01:34:26 -07:00
Tom Stitt
dc3e1d9a40
sdl2: add v2.0.14 (#25046) 2021-07-23 10:24:38 +02:00
Caleb Robinson
0c65433dd3
py-omegaconf: add new package (#25052)
* Adding package for omegaconf

* Update var/spack/repos/builtin/packages/py-omegaconf/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Changing py-omegaconf to use github source URL instead of pypi

* Style fix

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-22 21:37:36 -07:00
Satish Balay
b89286d0de
amrex: add variant plotfile_tools (#25038) 2021-07-22 22:29:58 -04:00
Filippo Spiga
accdf4445d
Adding CUDA SDK 11.4.0 (#24609)
* Adding CUDA SDK 11.4.0

* Fixing import order (finger crossed)

* Fixing import order (thanks alalazo for the tips)

* Restored URLs for 11.4.0
2021-07-22 16:57:09 -07:00
Kevin Harms
0825463904
Add smoke test for darshan-util (#25016) 2021-07-22 16:46:09 -07:00
wspear
91b4d974f1
Add test operation to tau package (#25036)
Copy over the general purpose mm matmult testcase. On test run build, execute (with mpi as needed) and process profile output.
2021-07-22 10:09:18 -07:00
Seth R. Johnson
8735d0a281
Trilinos: enable x11 when +exodus (#25033)
* trilinos: rearrange dependencies

* trilinos: refactor tpl enables and add libx11 for +exodus

Fixes #25028
2021-07-22 12:27:29 -04:00
Richarda Butler
68dbca64e7
Archer: Add E4S testsuite stand alone test (#24729) 2021-07-22 09:26:14 -07:00
Adam J. Stewart
0b6a0dd7fa
py-torch: fix build on blue waters (#25026) 2021-07-22 07:13:36 -07:00
Adam J. Stewart
4e0f97bee3
PROJ: set PROJ_LIB env var (#25029) 2021-07-22 14:44:59 +02:00
natshineman
c0b6d42b23
Update MVAPICH2 Maintainers and GDR Dependencies (#25027)
Co-authored-by: Nick Contini <contini.26@buckeyemail.osu.edu>
Co-authored-by: Nat Shineman <shineman.5@buckeyemail.osu.edu>
2021-07-22 05:37:51 -07:00
Adam J. Stewart
537d316311
py-tensorboard-plugin-wit: fix build on Ubuntu (#25025) 2021-07-22 05:31:40 -07:00
albestro
7ad72de0d3
boost: conflict with GCC on macOS (#24917)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-07-22 09:49:20 +02:00
Iman Hosseini
8cfb0a0d52
nut: reflect conflict with nvhpc (#25023)
'random123' is a template library and cannot be compiled with nvhpc

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-07-22 08:34:06 +02:00
Ethan Stam
7011608be0
ParaView: Add cli11 dependency (#24732) 2021-07-21 16:51:49 -07:00
Harmen Stoppels
8e59c847dd
fix rocprofiler includes (#25009) 2021-07-21 16:21:36 -07:00
Robert Pavel
f12fccce65
flecsi: package updates (#24986)
Worked with flecsi developers to tighten, relax, and clarify
constraints and better understand how the flecsi project uses
legion. In the process, discovered that flecsi@1.4 cannot be
built with legion without heavy changes/reverts to the legion
and gasnet spackages.

Also, most importantly, fixed branding as to how flecsi is spelled
2021-07-21 22:43:51 +02:00
Adam J. Stewart
497dfee320
py-segmentation-models-pytorch: add new package (#25022) 2021-07-21 20:14:41 +00:00
Richarda Butler
dfc0aa86ee
Bolt: Add E4S testsuite stand alone test (#24846) 2021-07-21 19:40:14 +00:00
Matthieu Dorier
2db3459e6b
libpmemobj-cpp: fixing package not building because of valgrind flag (#24967) 2021-07-21 21:38:32 +02:00
Matthieu Dorier
feb0556664
pmdk: added versions up to 1.11.0 (#24972) 2021-07-21 21:36:32 +02:00
Adam J. Stewart
1f59163e8c
py-efficientnet-pytorch: add new package (#25021) 2021-07-21 19:33:45 +00:00
Adam J. Stewart
e1b2ab0105
py-pretrainedmodels: add new package (#25020) 2021-07-21 19:30:59 +00:00
Ryan Mast
147c4fb96d
helics: added "main" version (#24987) 2021-07-21 21:28:32 +02:00
Adam J. Stewart
df8e51d6e5
py-timm: add new package (#25019) 2021-07-21 19:25:04 +00:00
Tom Payerle
5a49264e19
metis: suppress warnings causing issues for %nvhpc builds (#25014)
We add compilation flags when using %nvhpc to suppress warnings
(which due to global -Werror flag in the build get promoted to
errors) for the following:
Diagnostic 111: statement is unreachable
Diagnostic 177: variable "foo" was declared but never referenced
Diagnostic 188: enumerated type mixed with another type
Diagnostic 550: variable "foo" was set but never used
2021-07-21 21:24:51 +02:00
Martin Pokorny
4a4d1759f5
Kokkos: allow c++17 starting with CUDA v11.0.0 (#25018) 2021-07-21 21:19:49 +02:00
Jonathan R. Madsen
80592613ad
timemory package: add versions including 3.2.3; update options (#24825)
* add variants: python hatchet/line-profiler support and likwid
  nvmon support
* removed ompt_standalone/ompt_llvm variants
2021-07-21 11:54:04 -07:00
Massimiliano Culpo
a68abc15c5 Fix bootstrap from sources
#24095 introduced a couple of bugs, which are fixed here:

1. The module path is computed incorrectly for bootstrapped clingo
2. We remove too many paths for `sys.path` in case of failures
2021-07-21 07:22:07 -07:00
Manuela Kuhn
9237a9f244
py-python-xmp-toolkit: add new package (#25008) 2021-07-21 06:52:38 -07:00
Matthieu Dorier
7a458be3eb
tkrzw: added more versions and compression variant (#24953) 2021-07-21 13:32:52 +00:00
Manuela Kuhn
9c96cc578e
py-soupsieve: add 1.9.6 and 2.2.1 (#24973) 2021-07-21 08:31:14 -05:00
Manuela Kuhn
1cf52de47a
py-requests-ftp: add new package (#24975) 2021-07-21 08:30:50 -05:00
Manuela Kuhn
8a038ef64c
py-duecredit: add new package (#25006) 2021-07-21 13:08:12 +00:00
Harmen Stoppels
bb985e40dd
z3: disable python binding by default (#25007)
z3 is a dependency of llvm and llvm-amdgpu, and when z3 python bindings
are enabled it depends on py-setuptools as a run dependency. That's
fine, except that py-setuptools now influences the hash of
llvm/llvm-amdgpu, which can be very annoying when another package
restricts the py-setuptools version -- you'll end up recompiling llvm
for no good reason :(.
2021-07-21 14:44:18 +02:00
Erik Schnetter
1c06ec0c11
yaml-cpp: add v0.7.0 (#24996) 2021-07-21 14:21:27 +02:00
Brian Van Essen
4e885b4358
lbann: update darwin build (#24998)
* Updated the lbann package to not enabled OpenMP in BLAS package when
working on Darwin systems.

* Add the Sphinx RTD theme as an explicit dependency when building documentation
2021-07-21 14:20:53 +02:00
Erik Schnetter
9b48827a10
pgplot: add libs method (#24999) 2021-07-21 14:19:02 +02:00
Erik Schnetter
7c5f48c99b
lorene: Use correct library names of dependencies (#25000)
Query `spec[...].libs` to find out library flags and names of dependencies.

Also define `libs` property.
2021-07-21 14:18:36 +02:00
Erik Schnetter
1ae760ef31
ssht: add v1.4.0 (#25001) 2021-07-21 14:17:48 +02:00
Robert Underwood
04c5582eb2
sz: add v2.1.12 (#25004) 2021-07-21 14:17:25 +02:00
Manuela Kuhn
78a5e98721
py-citeproc-py: add new package (#25005) 2021-07-21 14:12:47 +02:00
Manuela Kuhn
669769c090
exempi: add new package (#24982) 2021-07-21 14:11:21 +02:00