Commit graph

810 commits

Author SHA1 Message Date
Todd Gamblin
5a3338323c Merge pull request #419 from adamjstewart/features/libgpg-error
Add latest libgpg-error version
2016-02-03 08:56:06 -07:00
Todd Gamblin
8a4b86dac9 Merge pull request #420 from adamjstewart/features/qhull
Add latest qhull version
2016-02-03 08:55:32 -07:00
Todd Gamblin
bc4bf71d8f Merge pull request #421 from adamjstewart/features/phonopy
Add Phonopy and PyYAML Python modules
2016-02-03 08:54:22 -07:00
Todd Gamblin
fe358e24e3 Merge pull request #423 from epfl-scitas/packages/opencv
Added package : OpenCV
2016-02-03 08:52:58 -07:00
alalazo
44c1b06609 opencv : added package 2016-02-03 13:36:25 +01:00
alalazo
587d356d6e openssl : added logic to version computation. The package now warns user if he depends on an old version of the library 2016-02-03 08:59:26 +01:00
Adam J. Stewart
d2fb1522a3 Add Phonopy and PyYAML Python modules 2016-02-02 12:54:24 -06:00
Adam J. Stewart
ab3698e3a4 Add latest qhull version 2016-02-02 11:42:31 -06:00
Adam J. Stewart
422e87badb Add latest libgpg-error version 2016-02-02 10:57:58 -06:00
Ben Boeckel
2b140b9a34 hdf5: default +unsupported to on
This flag can end up being required if a dependency tree ends up needing
hdf5+cxx+parallel, but nothing turns it on. Since the core spack code
puts this together, it ends up that the end user needs to specify it
manually. Instead, just assume an unsupported configuration (since these
*are* useful setups) and if anyone wants to seek upstream support,
masking the flag can be done.
2016-02-01 11:46:33 -05:00
alalazo
c8d2275c06 opencv : reverted url_for_version modifications 2016-02-01 10:56:48 +01:00
alalazo
e67507478a opencv : reverted url_for_version modifications 2016-02-01 10:55:39 +01:00
alalazo
b0707a61e7 Merge branch 'develop' of https://github.com/LLNL/spack into issues/trilinos_385 2016-02-01 10:54:17 +01:00
Todd Gamblin
9eb037bc87 Merge pull request #415 from adamjstewart/features/hwloc
Checksum fix for hwloc
2016-02-01 02:41:47 -07:00
Todd Gamblin
140510fedf Merge pull request #408 from adamjstewart/features/fish
Modify url settings for fish package
2016-02-01 02:39:54 -07:00
alalazo
360abb070a netcdf : fixed typo in configure option
openssl : smarter URL computation
2016-02-01 08:33:03 +01:00
Gregory L. Lee
3bf6fed7b3 updated openssl version 2016-01-29 11:29:27 -08:00
Adam J. Stewart
d14d50beb6 Checksum fix for hwloc 2016-01-29 09:47:57 -06:00
Abhishek Kulkarni
74225544c6 Rename the hpx package to hpx-5. 2016-01-29 10:35:54 -05:00
Massimiliano Culpo
cd54793913 Cleaning up 2016-01-29 11:42:06 +01:00
alalazo
b574c4ad51 trilinos : updated package to meet changes in dependencies 2016-01-29 08:57:07 +01:00
Abhishek Kulkarni
5907cc0de5 Merge remote-tracking branch 'upstream/develop' into develop 2016-01-29 00:32:34 -05:00
Abhishek Kulkarni
2bea7f8d69 Add the HPX-5 package. 2016-01-29 00:29:20 -05:00
Todd Gamblin
9fb5ddbb4c Merge pull request #411 from adamjstewart/features/pnetcdf
Add PnetCDF and M4 packages
2016-01-28 20:52:59 -07:00
David Beckingsale
d9548c01af Correct package URL 2016-01-28 15:47:37 -07:00
Adam J. Stewart
4f34031534 Add PnetCDF and M4 packages 2016-01-28 15:41:58 -06:00
David Beckingsale
7e65f4da82 Add the Caliper package 2016-01-28 13:22:56 -08:00
Gregory L. Lee
0e52c30bb8 added py-wheel package 2016-01-28 10:42:46 -08:00
Adam J. Stewart
06f3cc33ba Modify url settings for fish package 2016-01-28 11:41:12 -06:00
alalazo
07bb6fef01 resource directive : now works with all the fetch strategies available 2016-01-28 10:58:56 +01:00
Adam J. Stewart
6122642b81 More NetCDF changes 2016-01-27 16:16:33 -06:00
Nicolas Richart
f1d8f30342 Bug fix: precedence in % operator seems to change depending in the python version 2016-01-27 10:54:41 +01:00
Todd Gamblin
90750f59c1 Merge pull request #400 from adamjstewart/features/netcdf
Extensive modifications to NetCDF package
2016-01-26 19:31:14 -07:00
Tom Scogland
23af31cb1c adding the cmocka unit testing library 2016-01-26 17:55:32 -08:00
Todd Gamblin
c344b30fc4 Merge pull request #342 from adamjstewart/features/hwloc
Add url_for_version function to calculate url
2016-01-26 16:01:17 -08:00
Todd Gamblin
d7bd023afa Merge pull request #339 from adamjstewart/features/hdf
Add HDF package
2016-01-26 15:51:57 -08:00
Adam J. Stewart
81ccba202c Make szip a variant 2016-01-26 15:38:22 -06:00
Adam J. Stewart
c6bb00085f Extensive modifications to NetCDF package 2016-01-26 12:04:48 -06:00
Adam J. Stewart
1d18f2031c Add szip variant 2016-01-25 14:57:33 -06:00
Todd Gamblin
b6731ea47c Merge pull request #336 from scheibelp/features/boost-additive-libs
additive compilation of boost libraries
2016-01-22 14:09:19 -08:00
Peter Scheibel
a653d2f5e2 Slightly more robust approach for setting defaults for noinstall_libs 2016-01-22 13:43:16 -08:00
Peter Scheibel
9f99ee61c7 1. added default install libs (atomic, test, locale, program_options)
2. clarify comment for default_noinstall_libs
3. renamed regex_icu variant to icu_support (both the locale and regex libs can
use it)
4. explicitly set b2 install ICU_PATH when regex_icu is activated
2016-01-22 13:25:45 -08:00
Alfredo Gimenez
10de5a3ec7 Patch fix for boost@1.60.0%gcc@4.4.7 2016-01-22 13:02:18 -08:00
Peter Scheibel
4a55b97d11 Fixed reference 2016-01-22 12:37:12 -08:00
Peter Scheibel
2e58bc3113 Sticking with additive approach but now most libraries are installed by default. 2016-01-21 19:57:49 -08:00
Erik Schnetter
2f70c842b8 Disable patch that was merged into upstream in 1.10.2 2016-01-21 14:13:39 -05:00
Erik Schnetter
6b3f023d98 Update OpenMPI to 1.10.2 2016-01-21 14:05:16 -05:00
Todd Gamblin
10848c2e9a Refactor args for Executable.__call__
- simplify output, error, and input redirection
- `return_output=True` is now `output=str`
- `return_output=True` will still work for the time being but is
  deprecated.

- previously you could say `return_output=True` and `output=<stream>`,
  which wouldn't actually write to the stream.  Now you actually can't
  specify erroneous cases since there is only one parameter with
  mutually exclusive options..
2016-01-21 10:46:33 -08:00
Todd Gamblin
25f7dbd3e9 Merge pull request #384 from epfl-scitas/packages/elpa
added package : elpa
2016-01-21 09:14:28 -08:00
Adam J. Stewart
03d5ee6738 Remove constraint on dependency version 2016-01-21 10:02:33 -06:00
Adam J. Stewart
950246b331 Remove constraint on dependency version 2016-01-21 09:54:24 -06:00
alalazo
d9b344a247 Merge branch 'develop' of https://github.com/LLNL/spack into packages/elpa 2016-01-21 12:05:28 +01:00
Todd Gamblin
f0a6bfa23c Merge pull request #376 from adamjstewart/features/mvapich2
Various updates to MVAPICH2 package
2016-01-21 01:59:35 -08:00
Todd Gamblin
dab65e4ba6 Merge pull request #380 from epfl-scitas/packages/mumps
Adding packages MUMPS and ScaLAPACK
2016-01-21 01:58:57 -08:00
alalazo
785c01218f elpa : added missing dependencies 2016-01-21 10:06:43 +01:00
alalazo
88f2a1d43a Merge remote-tracking branch 'scitas/packages/mumps' into packages/elpa 2016-01-21 08:34:44 +01:00
alalazo
a8132470e4 Merge branch 'develop' into packages/elpa 2016-01-21 08:33:59 +01:00
Nicolas Richart
b71b478a36 Minor correction to install mumps+mpi 2016-01-20 18:31:02 +01:00
alalazo
19caac69d8 openmpi : turned torque support into a variant (default false)
hdf5 : fixed a few bugs, removed suspicious macro deinition, etc.
2016-01-20 15:22:49 +01:00
Nicolas Richart
974fc65e0f renaming packages to follow changes on develop 2016-01-20 14:38:55 +01:00
Nicolas Richart
65f65ec4e4 Adding MUMPS and ScaLAPACK 2016-01-20 14:21:44 +01:00
alalazo
ab27fdc692 elpa : commit partial package. Blocked by missing scalapack 2016-01-20 09:35:15 +01:00
Peter Scheibel
965af75d23 Merge branch 'develop' into features/boost-additive-libs 2016-01-19 17:27:18 -08:00
Adam J. Stewart
98706d31dc Various updates to MVAPICH2 package
Use url_for_version function to specify urls
Add version 2.2b
Add dedicated MRAIL variant
Fix typo
Make fortran compiler flags more specific
2016-01-19 12:46:15 -06:00
Todd Gamblin
9be37da077 Merge pull request #373 from adamjstewart/features/mpich
Add verbs variant, remove deprecated configure flags
2016-01-19 08:59:59 -08:00
alalazo
e121faffa1 eigen : added package 2016-01-19 17:26:26 +01:00
Adam J. Stewart
0d42cdaffd Merge branch 'develop' into features/hdf 2016-01-19 10:09:25 -06:00
Adam J. Stewart
530f8e5b26 Merge branch 'develop' into features/hdf
* develop: (85 commits)
  Make libxcb compile with gcc 4.9.
  disable parallel install for glib (found races)
  disable cairo-trace, which is incompatible with older libiberty.h.
  Fix LaunchMon on newer gcc versions.
  Simplify output redirection in spack.util.executable
  Allow completely empty config files.
  Update cmake package to use http in all URLs.
  Fix create, diy, edit, and repo commands to use multiple repos.
  Add namespace option to find command.
  Temporary fix: Clang is the default compiler on Mac OS X.
  Netcdf requires cmake >=2.8.12
  Mbedtls depends on cmake
  Update libtool to 2.4.6
  Update Julia to 0.4.3
  Make binutils build on OS X
  Add verbs and psm variants
  py-matplotlib: depend on freetype
  py-numpy: make blas/lapack optional dependencies
  qhull: apply patch to work with libc++'s standard library
  New package GNU tar
  ...
2016-01-19 10:07:21 -06:00
Adam J. Stewart
fbab88b0e1 Merge branch 'develop' into features/xz
* develop: (85 commits)
  Make libxcb compile with gcc 4.9.
  disable parallel install for glib (found races)
  disable cairo-trace, which is incompatible with older libiberty.h.
  Fix LaunchMon on newer gcc versions.
  Simplify output redirection in spack.util.executable
  Allow completely empty config files.
  Update cmake package to use http in all URLs.
  Fix create, diy, edit, and repo commands to use multiple repos.
  Add namespace option to find command.
  Temporary fix: Clang is the default compiler on Mac OS X.
  Netcdf requires cmake >=2.8.12
  Mbedtls depends on cmake
  Update libtool to 2.4.6
  Update Julia to 0.4.3
  Make binutils build on OS X
  Add verbs and psm variants
  py-matplotlib: depend on freetype
  py-numpy: make blas/lapack optional dependencies
  qhull: apply patch to work with libc++'s standard library
  New package GNU tar
  ...
2016-01-19 10:05:50 -06:00
Adam J. Stewart
58f18d5b12 Merge branch 'develop' into features/hwloc
* develop: (85 commits)
  Make libxcb compile with gcc 4.9.
  disable parallel install for glib (found races)
  disable cairo-trace, which is incompatible with older libiberty.h.
  Fix LaunchMon on newer gcc versions.
  Simplify output redirection in spack.util.executable
  Allow completely empty config files.
  Update cmake package to use http in all URLs.
  Fix create, diy, edit, and repo commands to use multiple repos.
  Add namespace option to find command.
  Temporary fix: Clang is the default compiler on Mac OS X.
  Netcdf requires cmake >=2.8.12
  Mbedtls depends on cmake
  Update libtool to 2.4.6
  Update Julia to 0.4.3
  Make binutils build on OS X
  Add verbs and psm variants
  py-matplotlib: depend on freetype
  py-numpy: make blas/lapack optional dependencies
  qhull: apply patch to work with libc++'s standard library
  New package GNU tar
  ...
2016-01-19 10:01:42 -06:00
Adam J. Stewart
f48fc0d8b1 Revert deprecated configure flags 2016-01-19 09:43:28 -06:00
Adam J. Stewart
16f1267c29 Merge branch 'develop' into features/mpich
* develop: (43 commits)
  Make libxcb compile with gcc 4.9.
  disable parallel install for glib (found races)
  disable cairo-trace, which is incompatible with older libiberty.h.
  Fix LaunchMon on newer gcc versions.
  Simplify output redirection in spack.util.executable
  Allow completely empty config files.
  Fix create, diy, edit, and repo commands to use multiple repos.
  Add namespace option to find command.
  Temporary fix: Clang is the default compiler on Mac OS X.
  update compiler config test.
  add sanity check on config write as well as validation on read.
  Add jsonschema validation for config files.
  Make text wrapping off by default in tty, add a kwarg for it.
  add/remove/list working for new config format.
  Add Python 3 aliases to our argparse backport.
  All tests that call concretize() need to be MockPackagesTests.
  Fix bug in tests.
  Rework mirror configuration.
  Rework compiler configuration and simplify config.py logic.
  Remove mock_configs; tests no longer modify spack home directory.
  ...
2016-01-19 09:37:53 -06:00
Todd Gamblin
01c5b53ba1 Make libxcb compile with gcc 4.9. 2016-01-19 01:16:15 -08:00
Todd Gamblin
047f1b9de9 disable parallel install for glib (found races) 2016-01-19 01:16:15 -08:00
Todd Gamblin
b7b4faff96 disable cairo-trace, which is incompatible with older libiberty.h. 2016-01-19 01:16:14 -08:00
Todd Gamblin
67ea7ce0ab Fix LaunchMon on newer gcc versions. 2016-01-19 01:16:14 -08:00
Todd Gamblin
8d6342c53d Merge branch 'mplegendre-multi_pkgsrc_roots' into develop
- This moves var/spack/packages to var/spack/repos/builtin/packages.

- Packages that did not exist in the source branch, or were changed in
  develop, were moved into var/spack/repos/builtin/packages as part of
  the integration.

Conflicts:
	lib/spack/spack/test/unit_install.py
	var/spack/repos/builtin/packages/clang/package.py
2016-01-19 01:16:08 -08:00
Adam J. Stewart
58162ec170 Add verbs variant, remove deprecated configure flags 2016-01-18 16:03:41 -06:00
Todd Gamblin
d802165e03 Merge pull request #355 from eschnett/eschnett/llvm
LLVM depends on cmake, and does not depend on isl
2016-01-17 19:24:17 -08:00
Todd Gamblin
4bab6f9fdb Update cmake package to use http in all URLs. 2016-01-17 18:55:36 -08:00
Todd Gamblin
afcd5420ee Merge pull request #356 from eschnett/eschnett/tar
New package GNU tar
2016-01-17 18:49:14 -08:00
Todd Gamblin
85e8f8eb6a Merge pull request #353 from eschnett/eschnett/ncurses
Install ncurses properly
2016-01-17 18:49:00 -08:00
Todd Gamblin
635e053e6d Merge pull request #358 from adamjstewart/features/openmpi
Add psm and verbs variants
2016-01-17 18:45:13 -08:00
Todd Gamblin
77c6038711 Merge pull request #370 from eschnett/eschnett/netcdf-cmake
Netcdf requires cmake >=2.8.12
2016-01-17 18:31:56 -08:00
Todd Gamblin
a473830533 Merge pull request #367 from eschnett/eschnett/mbedtls-cmake
Mbedtls depends on cmake
2016-01-17 18:26:07 -08:00
Todd Gamblin
99390be127 Merge pull request #366 from eschnett/eschnett/libtool-2.4.6
Update libtool to 2.4.6
2016-01-17 18:25:55 -08:00
Todd Gamblin
c20f8eb5b3 Merge pull request #365 from eschnett/eschnett/julia-0.4.3
Update Julia to 0.4.3
2016-01-17 18:25:45 -08:00
Todd Gamblin
1a145f68a7 Merge pull request #362 from eschnett/eschnett/binutils-osx
Make binutils build on OS X
2016-01-17 18:25:24 -08:00
Erik Schnetter
81f1311a60 Netcdf requires cmake >=2.8.12 2016-01-17 14:57:08 -08:00
Erik Schnetter
f4b87e2967 Mbedtls depends on cmake 2016-01-17 11:05:15 -05:00
Erik Schnetter
60656b6255 Update libtool to 2.4.6 2016-01-17 11:03:40 -05:00
Erik Schnetter
e585a5d8a3 Update Julia to 0.4.3 2016-01-17 11:02:30 -05:00
Erik Schnetter
36a428b8fc Make binutils build on OS X
Binutils defines several global variables multiple times. Apparently this works fine under Linux, but it leads to a linker error on Darwin. Rename these global variables.

Note that binutils on OS X is still not really useful, as important tools (e.g. ld) are not supported.
2016-01-17 10:49:13 -05:00
Peter Scheibel
d22cf1aed1 1. raise an exception if the multithreaded and singlethreaded options are both
disabled
2. invoke the b2 installation once for each enabled threading option (apparently
the install fails if a single call has both options enabled for mpi)
2016-01-15 18:07:41 -08:00
Adam J. Stewart
eac795abc3 Add verbs and psm variants 2016-01-15 15:09:36 -06:00
Ben Boeckel
4f60948bff py-matplotlib: depend on freetype
Probably a missed dependency, but appeared on OS X.
2016-01-15 16:04:49 -05:00
Ben Boeckel
c3bf1a7741 py-numpy: make blas/lapack optional dependencies
OS X is having trouble building these libraries, so make them optional
dependencies.
2016-01-15 16:03:51 -05:00
Ben Boeckel
f6680a0051 qhull: apply patch to work with libc++'s standard library
Only seen on OS X with clang right now.
2016-01-15 16:02:35 -05:00
Nicola Varini
7fc308ed26 Update to version 5.3 2016-01-15 17:04:25 +01:00
Nicola Varini
7d0256c9fb Quantum-ESPRESSO package 2016-01-15 10:27:38 +01:00