Commit graph

15167 commits

Author SHA1 Message Date
Adam J. Stewart
0606091775
py-tqdm: add new version (#16284) 2020-04-24 19:59:15 -05:00
Axel Huebl
5828a8f7e6
spack env: activate note (#16279)
print a note on how to activate a newly created environment
2020-04-24 13:24:52 -07:00
Toyohisa Kameyama
051d0d935a
Chainer: New Package. (#16251)
* Chainer: New Package.

* 1. Add maintainers.
2. fix dependency.
3. Add typing-extention@3.6.6 and fix version dependency.

* afixed dependency.

* remove python dependency for version 6.
2020-04-24 11:56:10 -05:00
Jeffrey Salmond
95a03f6759
Add vscode files to gitignore (#16270) 2020-04-24 09:31:03 +02:00
Todd Gamblin
c6ada206af
tests: each mock package now has its own class (#16157)
Packages in Spack are classes, and we need to be able to execute class
methods on mock packages.  The previous design used instances of a single
MockPackage class; this version gives each package its own class that can
spider depenencies.  This allows us to implement class methods like
`possible_dependencies()` on mock packages.

This design change moves mock package creation into the
`MockPackageMultiRepo`, and mock packages now *must* be created from a
repo.  This is required for us to mock `possible_dependencies()`, which
needs to be able to get dependency packages from the package repo.

Changes include:

* `MockPackage` is now `MockPackageBase`
* `MockPackageBase` instances must now be created with
  `MockPackageMultiRepo.add_package()`
* add `possible_dependencies()` method to `MockPackageBase`
* refactor tests to use new code structure
* move package mocking infrastructure into `spack.util.mock_package`,
  as it's becoming a more sophisticated class and it gets lots in `conftest.py`
2020-04-23 18:21:49 -07:00
Adam J. Stewart
433a0b243f
oneDNN: add new version (#16267) 2020-04-23 19:50:22 -05:00
Jeffrey Salmond
9b3a0355bb
add fontconfig as vim dependency (#16268) 2020-04-23 19:50:05 -05:00
Christoph Junghans
a844467c25
eospac: prefer 6.4.0 (#16266) 2020-04-23 15:53:51 -06:00
Todd Gamblin
0c0f11caf6
spack info: allow variants section to be as wide as the terminal (#16254)
The variants table in `spack info` is cramped, as the *widest* it can be
is 80 columns.  And that's actually only sort of true -- the padding
calculation is off, so it still wraps on terminals of size 80 because it
comes out *slightly* wider.

This change looks at the terminal size and calculates the width of the
description column based on it.  On larger terminals, the output looks
much nicer, and on small terminals, the output no longer wraps.

Here's an example  for `spack info qmcpack` with 110 columns.

Before:
    Name [Default]          Allowed values          Description
    ====================    ====================    ==============================

    afqmc [off]             on, off                 Install with AFQMC support.
                                                    NOTE that if used in
                                                    combination with CUDA, only
                                                    AFQMC will have CUDA.
    build_type [Release]    Debug, Release,         The build type to build
                            RelWithDebInfo
    complex [off]           on, off                 Build the complex (general
                                                    twist/k-point) version
    cuda [off]              on, off                 Build with CUDA

After:
    Name [Default]          Allowed values          Description
    ====================    ====================    ========================================================

    afqmc [off]             on, off                 Install with AFQMC support. NOTE that if used in
                                                    combination with CUDA, only AFQMC will have CUDA.
    build_type [Release]    Debug, Release,         The build type to build
                            RelWithDebInfo
    complex [off]           on, off                 Build the complex (general twist/k-point) version
    cuda [off]              on, off                 Build with CUDA
2020-04-23 12:14:40 -07:00
Mark W. Krentel
686f0e21de
libunwind: add 1.4.0 release and 1.5 stable branch (#16261) 2020-04-23 12:34:19 -05:00
Andrew Gaspar
2a3942fa4c
Rust 1.43.0 (#16260) 2020-04-23 12:33:02 -05:00
Andrew W Elble
d5d232e207
tensorflow: compile against spack-provided protobuf (#16258)
This allows horovod to be built with frameworks=pytorch,tensorflow.

I tracked down the crash I observed in #15719, where loading torch
before tensorflow would cause a crash in:

google::protobuf::internal::(anonymous
namespace)::InitSCC_DFS(google::protobuf::internal::SCCInfoBase*)

The solution is to make tensorflow compile against the protobuf
version Spack provides, instead of allowing it to use it's own.
It's likely we'll want to go after some of the others
that are listed in third_party/systemlibs/syslibs_configure.bzl
in the future.
2020-04-23 11:14:09 -05:00
jthies
ca67df6e3d
phist: don't apply patch to 1.9.0 (#16257) 2020-04-23 11:11:54 -05:00
darmac
6cad7a585d
Go: support for aarch64 (#16083) 2020-04-23 11:01:20 -05:00
darmac
df2cfd26cd
ambari: added package at v2.7.5 (#16149) 2020-04-23 12:43:12 +02:00
Massimiliano Culpo
19c5843871
Travis: change the spec we concretize on MacOS (#16256)
Since CMake can't build with GCC on MacOS, choose a
spec that doesn't have CMake in the DAG.
2020-04-23 11:40:23 +02:00
Michael Kuhn
b1133cb5db
py-setuptools: added v44.1.0 and v46.1.3 (#16171) 2020-04-23 10:09:09 +02:00
Michael Kuhn
f07cdd7f7a
openssl: added 1.1.1g (#16247) 2020-04-23 10:01:23 +02:00
darmac
807a08a69b
enca: added package at v1.19 (#16255) 2020-04-23 09:59:32 +02:00
Joseph Ciurej
044985af80
cryptopp : added 'shared' variant and sse detection (#16213) 2020-04-23 09:38:10 +02:00
darmac
7c0aee4127
cpp-httplib: added package at v0.5.9 (#16228) 2020-04-23 09:35:14 +02:00
darmac
04457fe031
Py coilmq (#16203)
* Add new package: py-coilmq

* remove FIXME comment

* fix depends_on
2020-04-22 23:13:44 -05:00
darmac
fb1498abac
Add new package: dnsmasq (#16253) 2020-04-22 23:13:04 -05:00
darmac
15882d7868
Add new package: py-django (#16234) 2020-04-22 23:09:06 -05:00
darmac
7299de74c6
Add new package py-sqlparse (#16231)
* Update var/spack/repos/builtin/packages/py-sqlparse/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

* Add new package py-sqlparse

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-04-22 20:40:25 -05:00
Massimiliano Culpo
6f9373dd66
spack info: replace "True, False" with "on, off" (#16235)
fixes #16184
2020-04-22 17:48:52 -07:00
Axel Huebl
d0bff870a6
macOS+GCC: Conflicts CMake, libuv, CPython (#16249)
The major building blocks in many software stacks:
- CPython
- CMake (libuv)

do not build on macOS with GCC. The main problem is that some macOS
framework includes pull in objective-c code and that code does get
misinterpreted as (invalid) C by GCC by default.
2020-04-22 19:41:33 -05:00
Vicente Adolfo Bolea Sanchez
4166c97a82
vtk-m: update Vtk-m pkg to its latest version v1.5.1 (#16192)
Last month VTK-m releases its lastest version named `v1.5.1`. This new
release only contains bugfixes related to compiler error / warnings.

- Depends on CMake >= 3.12
- Set VTKm_NO_ASSERT=ON by default
- add maintainers

Signed-off-by: Vicente Adolfo Bolea Sanchez <vicente.bolea@kitware.com>
2020-04-22 18:54:55 -05:00
Mark W. Krentel
ec54f86c0b
gotcha: add version 1.0.3 (#16239) 2020-04-22 16:48:41 -05:00
Kelly (KT) Thompson
650745746a
Provide new version 0.6.10. (#16240) 2020-04-22 16:34:58 -05:00
Greg Becker
ec23e4ffe5
update compiler config with bootstrapped compiler when already installed (#16221)
Update compiler config with bootstrapped compiler when it was already installed and added config defaults to code so mutable_config test fixture works.
2020-04-22 14:26:29 -07:00
Adam J. Stewart
46e90692e8
PyTorch: add conflict for Apple Clang 11.0.3 (#16238)
* PyTorch: add conflict for Apple Clang 11.0.3

* Flake8 fix
2020-04-22 15:47:14 -05:00
Tim Haines
0d2ebbf996
hwloc: Add netloc variant (#16001)
hwloc depends on MPI when netloc is enabled. Note that OpenMPI depends on
netloc, so hwloc cannot use OpenMPI as the MPI provider when netloc is
enabled (this would result in a cyclic dependency).
2020-04-22 13:34:32 -07:00
George Hartzell
63ff121980
spack environments documentation: -E -> -e (#16242)
To specify an environment for a comment, the user can specify
"spack -e <env>". The documentation incorrectly specified "-E" (which
is actually used to ignore any implicit use of environments).
2020-04-22 13:04:17 -07:00
darmac
b874b3e1fe
Add new package: isc-dhcp (#16230) 2020-04-22 11:23:40 -05:00
darmac
169b9bebd8
Add new package: kea (#16232) 2020-04-22 11:17:30 -05:00
darmac
769f350802
Add new package: py-asgiref (#16233) 2020-04-22 11:16:49 -05:00
Rao Garimella
d77576d85d
update Jali version and dependent MSTK version (#16236)
Co-authored-by: Rao Garimella <rao@abyzou.lanl.gov>
2020-04-22 11:12:28 -05:00
Cameron Smith
e7906d6507
kokkos: generate_makefile calls cmake (#16237) 2020-04-22 11:11:55 -05:00
Sajid Ali
5f285fdd05
fix code-signing on macOS (#15592)
* rebase

* move if statement location

* remove whitespace

* spec to self.spec

* switch statements as per review

* fix erronous indent

* add missing cmake arg

* minor placement fix for cmake args

* edit comment

* fix erronous return

* clarify conflicts with messages

* remove duplicate comment

* simplify logic

* macos wasn't a variant, fix that

* remove extra blank line

* address reviewer comments on spaces
2020-04-22 09:49:07 -05:00
darmac
2a5592f419
Add new package: py-pid (#16202)
* Add new package: py-pid

* fix depends_on
2020-04-22 09:47:45 -05:00
asmaahassan90
d65b809f9b
Add new versions to Avizo (#16204)
* Add new versions

add versions 2019.3 and 2019.4 and adjust the install stage accordingly

* one small fix

* fix lint

* re-ordering the versions
2020-04-22 09:44:03 -05:00
Joseph Ciurej
0419f2c6df
Updated 'qt' to support '@5.12.7', '+debug', and '+opengl' with older OpenGL versions. (#16220) 2020-04-22 09:29:40 -05:00
Kelly (KT) Thompson
9c2819bdb3
libsm: added libuuid as dependency (#16226)
While building _visit_, I ran into an undefined symbol at link time. I tracked
the missing dependency to _libsm_ needing to know about _libuuid_ at link time.
2020-04-22 14:53:01 +02:00
darmac
be0aed9d8a
libcgroup: added package at v0.41 (#16229) 2020-04-22 13:19:01 +02:00
Jeffrey Salmond
b065150354
metis: fix build when version > 5.0 (#16186) 2020-04-22 12:18:38 +02:00
Elizabeth Fischer
0b753b9a77
py-pyproj: added v2.6.0 (#16176)
Co-authored-by: Elizabeth Fischer <elizabeth.fischer@alaska.edu>
2020-04-22 11:50:36 +02:00
Servesh
3e9af610e7
source-highlight: fix detection of boost (#16102)
Co-Authored-By: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-04-22 11:43:02 +02:00
darmac
ab35780fae
buddy: added package at v2.4 (#16166) 2020-04-22 10:55:07 +02:00
darmac
4c9c6b2a68
linux-pam: added package at v1.3.1 (#16137)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-04-22 10:53:28 +02:00