* Add Tophat v2.1.2, fixes automake issues
The Tophat team merged the patch from
https://github.com/spack/spack/pull/8244 and release v2.1.2
This change requires the old automake if you're building the older
release and is relaxed about the automake it requires if you're
building the v2.1.2 release.
Building v2.1.1 and v2.1.2 works on a CentOS 7 system, I don't have
the necessary bit to actually test the resulting binaries.
Here's the commit note from the change that was ultimately merged
upstream.
Fixes#8025
> Tophat was failing to build with automake@1.16.1, it worked with the
> older automake@1.15.1. This commit adds a patch to Tophat's
> src/Makefile.am which cleans up a few things. The result builds
> successfully with both automake@1.15.1 and automake@1.16.1. I have no
> way to check that the resulting builds Do The Right Thing.
>
> It changes two things:
>
> the original Makefile.am had a rule for $(SAMPROG) with no
> actions, and since there was a directory there with a tempting name
> the newer automake was trying to do something with it, but lacked
> the appropriate clues. Since that target is actually made as a side
> effect of making the library (sigh...), it seems to work to just
> give that rule something harmless to do (the Peter Principle
> triumphs again...).
>
> a bunch of the targets need a libtophat.a and libgc.a; the older
> automake was probably able to guess what to do given the list of
> sources but the newer automake apparently won't make the necessary
> assumptions. This patch wires up a simple rule and cleans up the
> appropriate dependencies so that things work.
>
> While it may appear that I'm someone who understands automake, keep in
> mind that I only play such a person on a TV reality show. YMMV.
* Remove extraneous when constraint
* kokkos: update kokkos spackage to add current host/gpu architectures.
* kokkos: simplify host/gpu architecture selection and make intent of arg population logic more clear.
* kokkos: mollify flake8.
* Make strings and logic more pythonic. Add error for GPU arch without CUDA.
* kokkos: simplify conflicts behaviour. make args population more pythonic.
* kokkos: move gpu values to list for use in variant and conflicts checking.
* kokkos: How fortunate the man with None.
* kokkos: fix gpu_arch conflict loop error. add conflict to guard against +cuda and 2.5.00:develop versions, until kokkos issue #1296 is resolved.
* kokkos: mollify flake8.
* kokkos: add descriptive message to version conflict with +cuda.
* update globalarrays package to current releases
* rename class to Globalarrays to match package folder
* rename bytes to int64, minor cleanup of descriptions
* int64 False by default
* remove reference to external as we aren't supplying paths, and use args.append()
* correcting args.append syntax
* add conflicts
* Fix bug; don't know why this ever worked in the first place.
* Add fix to netcdf-fortran too; flake8
* Simplify configure_args()
* netcdf-fortran: simplify that too
* Use libs[0] and headers.directories[0] instead of hardcoded paths in opencv dependencies
* Fix library finding in libjpeg-turbo
* Use build_type=Debug instead of +debug to determine build_type
Spack doesn't have a CSharp package, so the only time ANTLR would
succeed is if a system-installed CSharp was available. This disables
CSharp support, which enables building on systems without
system-installed CSharp.
* PR #4945 did not make this work on SuSE 11. Adding the latest version of libexpat did. Also update for Expat's move to GitHub.
* Update package.py
* Update package.py
Move to url_for_version()
* Changed netlib-lapack to fix an error in their CMake setup. Changed
netlib-lapack spackage file to add Fortran flags correctly for XL
compiler.
* Fixed line length -- forgot abt flake8...
* Fix the package version where the ibm patch applies.
- simplify the singleton pattern across the codebase
- reduce lines of code needed for crufty initialization
- reduce functions that need to mess with a global
- Singletons whose semantics changed:
- spack.store.store() -> spack.store
- spack.repo.path() -> spack.repo.path
- spack.config.config() -> spack.config.config
- spack.caches.fetch_cache() -> spack.caches.fetch_cache
- spack.caches.misc_cache() -> spack.caches.misc_cache
- spack.store was previously initialized at the spack.store module level,
but this means the store has to be initialized on every spack call.
- this moves the state in spack.store to a singleton so that the store is
only initialized when needed.
Fixes#8152
Flex 2.6.4 doesn't build with gcc@7:. This sets Flex 2.6.3 as the
preferred version. The flex package had a conflict directive for
this but originally the recorded conflict was specific to ubuntu;
this appears to be an issue on multiple operating systems so this
also updates the conflict to be more general and adds a comment
which links to the relevant issues.
Fixes#7946
Creates an openspeedshop-utils package that does not depend on qt3
and can be used to resolve the needs of cbtf-argonavis-gui.
Changes for creating a release versus develop build are also
included. There are package versions which are no longer relevant
(e.g. 1.3.0 for cbtf-argonavis-gui has been replaced with 1.3.0.0)
but these versions need to be kept to allow uninstalling them;
issue #8173 has been created to investigate this.
- After spack install, these test cases are built in a seperate step, outside of spack, but they need to patched after staging so users don't have to do it in a seperate step.
- The test cases are installed under `<petsc install directory>/share/petsc/examples` and can be built and executed by invoking `gmake -f gmakefile.test` in that directory.
* Added Shim to Support hdf5+mpi in Spack Silo
Added compatibility for hdf5+mpi to silo spackage to support spackages
with dependency chains that include silo and hf5+mpi
* Fixed fixable flake8 issue with silo spackage
Fixed missing whitespace around operator
* Setting MPI Variant to Default to True
As per guidance changing variant to default to MPI builds
