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Author SHA1 Message Date
Todd Gamblin
c0f0350634 Merge pull request #583 from davydden/openblas_osx 
fix openblas suffix for OS-X
 2016-03-20 03:37:30 -07:00
Denis Davydov
db61a09cf1 fix mumps: when installed with parmetis has to be linked with metis 2016-03-20 09:47:15 +01:00
Denis Davydov
95ad2875b6 fix scalapack suffix for osx 2016-03-20 09:27:07 +01:00
Denis Davydov
620c120503 fix openblas suffix for OS-X 2016-03-20 09:26:11 +01:00
Kelly (KT) Thompson
ed0b5e649d + Provide fpic variant for netlib-lapack. 2016-03-19 20:45:35 -06:00
alalazo
5f6f2d5f51 Revert "openssl : solved glitch to prevent spack to freeze when the network is unreachable" 
This reverts commit 4cf4bf3a03.
 2016-03-18 14:42:24 +01:00
alalazo
ec8cc2b528 PYTHONPATH : python patches methods for its extensions 2016-03-18 14:40:53 +01:00
alalazo
82ba0c6c07 Merge branch 'bugfix/openssl' into features/env_objects_flying_around 2016-03-18 11:08:55 +01:00
Erik Schnetter
3b24db92b5 Update PAPI to 5.4.3 2016-03-18 11:08:16 +01:00
alalazo
4cf4bf3a03 openssl : solved glitch to prevent spack to freeze when the network is unreachable 2016-03-18 11:05:59 +01:00
alalazo
f9438c75d0 Merge branch 'develop' of https://github.com/LLNL/spack into features/env_objects_flying_around 2016-03-18 10:26:34 +01:00
Todd Gamblin
179ed7cce6 Merge pull request #566 from eschnett/eschnett/papi 
Update PAPI to 5.4.3
 2016-03-17 18:52:44 -07:00
Todd Gamblin
1689131043 Merge pull request #567 from eschnett/eschnett/openblas 
Update OpenBLAS to 0.2.16
 2016-03-17 18:52:32 -07:00
Todd Gamblin
a88c02854a Merge pull request #565 from eschnett/eschnett/curl 
Update curl to 7.47.1
 2016-03-17 18:52:02 -07:00
Erik Schnetter
1b279cd7ff Update OpenBLAS to 0.2.16 2016-03-17 21:51:26 -04:00
Erik Schnetter
802acb4d16 Update PAPI to 5.4.3 2016-03-17 21:50:21 -04:00
Todd Gamblin
90268876f7 Change sanity_check_[file|dir] to sanity_check_is_[file|dir], per #554 
- Add documentation as well.
 2016-03-17 18:49:58 -07:00
Erik Schnetter
9e4c757f50 Update curl to 7.47.1 2016-03-17 21:49:36 -04:00
alalazo
e558809043 python : fixed typo 2016-03-17 19:32:31 +01:00
alalazo
ac394718ec python : implemented possible solution 2016-03-17 18:22:07 +01:00
alalazo
f0f0663d1b package : split environment_modifications into setup_environment and setup_dependent_environment. 
package : renamed `module_modifications` to `modify_module` for consistency
 2016-03-17 15:11:39 +01:00
citibeth
fa2a66db67 1. Disabled git versions known to have vulnerabilities. 
2. Added autoconf command to allow building directly from GitHub source.
 2016-03-16 15:46:59 -04:00
Todd Gamblin
905549ea2d Merge pull request #555 from epfl-scitas/packages/binutils 
Adding latest version in binutils
 2016-03-16 08:39:13 -07:00
alalazo
597727f8be tclmodules : added hooks to process EnvironmentModifications objects 2016-03-16 15:19:13 +01:00
Nicolas Richart
9c29966674 Change urls in binutils to help 'spack checksum/versions' + adding latest version 2016-03-16 12:57:17 +01:00
alalazo
b45ec3f04e environment : simplified modification of the environment 2016-03-16 10:55:28 +01:00
alalazo
b2c98feea4 Merge branch 'develop' of https://github.com/LLNL/spack into features/env_objects_flying_around 2016-03-16 09:02:35 +01:00
Todd Gamblin
68d22253ec Add sanity checks to the libelf build. 2016-03-15 17:22:48 -07:00
Matthew LeGendre
108ea1522a Merge pull request #549 from LLNL/bugfix/gh538-less-greedy-concretize 
Bugfix/gh538 less greedy concretize
 2016-03-15 16:18:54 -07:00
Todd Gamblin
cdd2ea3067 Merge pull request #537 from adamjstewart/features/octave 
Add GNU Octave package
 2016-03-15 11:23:40 -07:00
alalazo
572cb93bf8 package : renamed setup_dependent_environment to module_modifications 2016-03-15 14:05:30 +01:00
alalazo
c85888eb57 package : added environment_modifications 2016-03-15 13:36:41 +01:00
alalazo
bcea1df01c environment : refactoreded set_build_environment_variables 2016-03-15 10:49:33 +01:00
Adam J. Stewart
0d9a6d3c25 Updates to qrupdate 2016-03-14 14:19:30 -05:00
Todd Gamblin
f45b8b1083 Add some tests for packages with multiple virtual dependencies. 
- Added mock `hypre` package, depends on `lapack` and `blas`.

- test cases where some packages provide both `lapack` and `blas`, but
  others do not.
 2016-03-14 05:02:50 -07:00
Erik Schnetter
8b715d9c3f Update tmux 2016-03-13 21:31:48 -04:00
Elizabeth F
7cd478418d New version of LAPACK 2016-03-11 23:28:36 -05:00
Elizabeth F
90f2e40ff9 Added comment to Emacs. 2016-03-11 23:28:16 -05:00
Adam J. Stewart
145390c7f3 Add gl2ps and qrupdate packages 2016-03-11 16:57:37 -06:00
Todd Gamblin
081bdd0828 Merge pull request #528 from citibeth/efischer/160309-Emacs 
Added Emacs package
 2016-03-11 13:31:58 -08:00
Adam J. Stewart
6ec65cd4ca Add GNU Octave package 2016-03-11 15:03:37 -06:00
Todd Gamblin
4574f768ef Merge pull request #526 from KineticTheory/develop 
Provide instructions for cmake/3.5.0 (plus 2 new variants) and qt/5.4.2
 2016-03-11 09:20:47 -08:00
Kelly (KT) Thompson
f5e8857c5e + Rename variant 'sphinxbuild' to 'doc' as recommended in the discussion of 
PR#526. Also, remove a debug print statement that was accidentally committed.
 2016-03-11 09:51:12 -07:00
Kelly (KT) Thompson
280384fce3 Merge remote-tracking branch 'upstream/develop' into develop 2016-03-10 09:09:16 -07:00
Todd Gamblin
b637f75164 Merge branch 'mplegendre-features/external-packages' into develop 2016-03-10 02:04:44 -08:00
alalazo
4f14db8af2 netlib-lapack : optional dependency on external blas 2016-03-10 10:34:51 +01:00
Todd Gamblin
1fe196f95c whitespace and formatting 2016-03-10 01:29:55 -08:00
Todd Gamblin
ad6625456e Merge pull request #513 from alfredo-gimenez/develop 
Variants and fixes to thrift package
 2016-03-10 00:59:15 -08:00
Elizabeth F
b701aa10d4 Fixed up 2016-03-09 21:21:25 -05:00
Elizabeth F
267e83d8a7 Added emacs package. 2016-03-09 21:16:50 -05:00
Todd Gamblin
bf1639e044 Merge pull request #522 from epfl-scitas/bugfix/mpfr 
change of url for mpfr
 2016-03-09 17:17:23 -08:00
Kelly (KT) Thompson
23cbc2b1d9 + Provide download/build instructions for qt/5.4.2. 
- This version provides updates to provided cmake scripts that are required
    for building cmake-gui.
+ Provide download/build instructions for version 3.5.0.
  - When building the +qt variant, add a validate function to ensure that
    qt-5.4.0 is not used (this version of qt has errors related to cmake).
 2016-03-09 17:59:39 -07:00
Nicolas Richart
6e82ab1f15 change of url for mpfr 2016-03-09 21:18:44 +01:00
Todd Gamblin
b93a2ba1cf Merge pull request #520 from LLNL/bugfix/remove-hdf5-unsupported-variant 
Removing `unsupported` variant from HDF5.
 2016-03-09 11:39:06 -08:00
Kelly (KT) Thompson
113e942c3c Merge remote-tracking branch 'upstream/develop' into develop. 2016-03-09 12:38:48 -07:00
Todd Gamblin
45ef496dd5 Add some descriptive language to a list comprehension. 2016-03-09 11:26:37 -08:00
Alfredo Adolfo Gimenez
383e73a5f5 Remove unneccessary depends_on 2016-03-09 11:25:51 -08:00
Todd Gamblin
d06ebf23d4 Removing unsupported variant from HDF5. 
- `unsupported` shouldn't be a variant.
 2016-03-09 11:16:35 -08:00
Matthew LeGendre
87db69478d Merge branch 'develop' into features/external-packages 
Conflicts:
	lib/spack/spack/package.py
 2016-03-09 11:09:37 -08:00
Todd Gamblin
b43c277dc6 Merge @citibeth and @alalazo's petsc fixes from #515 and #517 2016-03-09 10:55:50 -08:00
Todd Gamblin
ad7d89b165 Merge branch 'efischer/160309-HypreFix' of git://github.com/citibeth/spack into citibeth-efischer/160309-HypreFix 2016-03-09 10:54:08 -08:00
Todd Gamblin
8ac1752743 Merge pull request #501 from adamjstewart/patches/m4 
Add patch to allow PGI to build M4
 2016-03-09 10:29:48 -08:00
Adam J. Stewart
8e76cda200 Patch config.hin, not extern-inline.m4 2016-03-09 10:41:31 -06:00
alalazo
f01d1c4385 petsc : added variants and logic to build various flavors 2016-03-09 14:36:37 +01:00
Elizabeth F
c67b922185 Added shared library capability. 2016-03-09 00:34:08 -05:00
Elizabeth F
5b22873b3d Fixed issues with hypre: 
1. --with-lapack-lib was wrong.
2. --with-MPI was wrong; set env vars for MPI wrappers instead.
3. Added version 2.10.1
4. Added shared library variant (True by default).  Hypre can build shared or static libraries, but not both in the same build.
 2016-03-09 00:27:25 -05:00
Alfredo Gimenez
0c7d0c0b6c Variants and fixes to thrift package 2016-03-08 12:26:40 -08:00
Adam J. Stewart
e0e545774a Add more versions to Autotools 2016-03-08 12:15:40 -06:00
Todd Gamblin
18ce5ccf8f Avoid race in pango's make install, set parallel=False 2016-03-08 02:49:11 -08:00
Adam J. Stewart
b7750cf61c Autoreconf is necessary after patch 2016-03-07 15:52:22 -06:00
Adam J. Stewart
1e7d946d91 Add patch to allow PGI to build M4 2016-03-07 12:37:51 -06:00
Todd Gamblin
96e1b2d25c Merge pull request #486 from RemoteConnectionManager/paraview_fix 
Paraview new version
 2016-03-07 02:48:12 -08:00
Todd Gamblin
bff7107f56 Merge pull request #491 from citibeth/efischer/160229-NewPackages-2 
(2) New packages added: blitz, netcdf-cxx4, netcdf-fortran, proj, udunits2
 2016-03-07 02:45:37 -08:00
Erik Schnetter
a399451e1e Update OpenSSL to 1.0.2g 2016-03-06 23:34:48 -05:00
citibeth
ae87948a23 Fixed URLs 
Removed vestigal mpi variant in netcdf-fortran
 2016-03-05 23:05:45 -05:00
Todd Gamblin
c59546fae0 Merge branch 'adamjstewart-features/libsigsegv' into develop 2016-03-05 15:15:08 -08:00
Todd Gamblin
7d847f4dc4 Minor tweaks to m4 -- be sure to add sigsegv args explicitly. 2016-03-05 15:14:21 -08:00
Todd Gamblin
07255da6e9 Merge branch 'features/libsigsegv' of https://github.com/adamjstewart/spack into adamjstewart-features/libsigsegv 2016-03-05 15:06:49 -08:00
Adam J. Stewart
220b6a9fee Make libsigsegv an optional dependency 2016-03-05 16:46:32 -06:00
Todd Gamblin
24f0757d82 Merge pull request #343 from adamjstewart/features/mpc 
Add different URL for older source code
 2016-03-05 14:37:43 -08:00
Todd Gamblin
3dd630d0a5 Make openssl a variant in libevent. 2016-03-05 14:33:23 -08:00
Todd Gamblin
0b864aacdc Merge branch 'eschnett/libevent' of https://github.com/eschnett/spack into eschnett-eschnett/libevent 2016-03-05 14:23:06 -08:00
Todd Gamblin
ac67f3b53e Merge pull request #487 from spakin/llvm-3.7.1 
Added LLVM 3.7.1 support
 2016-03-05 14:19:31 -08:00
Todd Gamblin
a9d7135c19 Merge pull request #495 from alfredo-gimenez/develop 
Fixed unmatched function signature for do_fetch in jdk package
 2016-03-05 14:16:09 -08:00
Mark Miller
f663d37da7 Adding zfp package. 2016-03-04 17:08:11 -08:00
Alfredo Gimenez
f90eaa5f46 Fixed unmatched function signature for do_fetch in jdk package 2016-03-04 14:53:08 -08:00
Adam J. Stewart
a7b918837e GNU m4 depends on libsigsegv 2016-03-04 15:22:28 -06:00
Elizabeth Fischer
648d08eb30 Update package.py 
Updated homepage URL to general NetCDF homepage.
 2016-03-04 12:05:43 -05:00
Elizabeth Fischer
b043c4a5b8 Update package.py 
Removed comments on configure options.
 2016-03-04 12:04:41 -05:00
Elizabeth F
0eb6ef2cd0 1. Removed fake MPI dependency from netcdf-cxx4 and netcdf-fortran. 
2. Removed Fortran bootstrap variant from netcdf.  Users who need NetCDF Fortran interface should install netcdf-fortran.

3. Added result of ./configure --help on the netcdf-fortran.  Verified  the package has no additional options that should be exposed through Spack.
 2016-03-04 11:14:52 -05:00
alalazo
a2af4940aa atlas : disabling parallel builds 2016-03-04 09:59:16 +01:00
alalazo
310099d888 atlas : provides blas and lapack 2016-03-04 09:32:01 +01:00
Scott Pakin
7183db1b7d Added LLVM 3.7.1 support 2016-03-03 11:30:57 -07:00
alalazo
63ae407169 netlib-lapack : unified build with netlib-blas 
openssl : updated version
py-numpy : updated dependencies
 2016-03-03 16:39:21 +01:00
Luigi Calori
f5cc63156c Merge branch 'develop' of https://github.com/RemoteConnectionManager/spack into paraview_fix 
merge upstream develop
 2016-03-03 12:43:38 +01:00
citibeth
976d0240c4 Removed FIXMEs. 2016-03-02 18:58:47 -05:00
Todd Gamblin
8421dcb762 Merge pull request #452 from epfl-scitas/llvm/cleanup 
Cleaned package : llvm
 2016-03-02 01:32:08 -08:00
Todd Gamblin
9c565b155a Merge pull request #462 from xjrc/packages/silo 
Update Package : Silo
 2016-03-02 01:31:10 -08:00
Kelly (KT) Thompson
8174489787 + Provide two new variants for cmake: 
1) +qt          - build the cmake-gui Qt application.
                  - adds a dependency on Qt.
  2) +sphinxbuild - build the html CMake documentation.
                  - adds a dependency on python and py-sphinx
 2016-03-01 15:25:57 -07:00
citibeth
eb1d90a8cf Undid accidental change on this branch. 2016-02-29 23:31:54 -05:00
Elizabeth F
15ae92aae9 New packages added: blitz, netcdf-cxx4, netcdf-fortran, proj, udunits2 2016-02-29 23:21:44 -05:00
Elizabeth F
e414c5fdfb Added missing cmake dependencies 2016-02-29 23:21:08 -05:00
Ian Lee
67f327f805 Updated links to use new llnl.gov address 2016-02-28 19:47:19 -08:00
Luigi Calori
8f3ac9ac8b adding new version to praview, compiled with spack -d install -j 8 --keep-stage paraview@5.0.0+qt+python+tcl+opengl2%gcc@4.8.2 ^netcdf -mpi 2016-02-27 01:40:32 +01:00
Joseph Ciurej
30d9ca2bde Updated the silo package and added the '+fortran' variant. 2016-02-26 16:06:17 -08:00
Erik Schnetter
20845a739f Libevent depends on OpenSSL 2016-02-24 22:18:51 -05:00
alalazo
976ae91dcc llvm : removed duplicate version 2016-02-24 14:11:57 +01:00
Todd Gamblin
0d23ff92b0 Merge pull request #446 from LLNL/bugfix/python_config_compiler 
modify compiler commands in python config files, fix for #431
 2016-02-24 10:52:06 +09:00
Todd Gamblin
87610a5102 Merge pull request #448 from epfl-scitas/packages/gromacs 
Added package : gromacs
 2016-02-24 10:49:06 +09:00
Tom Scogland
5c8dd6c3c8 llvm trunk version 
Adding a trunk version to the llvm package.  This has all the features
and requirements of the others, with the additional caveat that the llvm
project makes no guarantee that trunk on all repositories together will
necessarily make a working compiler.  It has been tested, and worked
with a version today, but not yesterday, so if you test keep that in
mind.
 2016-02-20 17:23:55 -08:00
Todd Gamblin
97c3854c40 Merge pull request #422 from epfl-scitas/packages/openssl_url 
openssl : url computation
 2016-02-19 16:28:02 -08:00
alalazo
30c3047482 gromacs : added package 2016-02-19 12:39:38 +01:00
Todd Gamblin
3c1aa9a4ad Merge pull request #298 from epfl-scitas/refactoring/resource_directive 
refactoring proposal : composite for Stage and FetchStrategy
 2016-02-18 23:13:12 -08:00
Gregory L. Lee
19d10291bf modify compiler commands in python config files, fix for #431 2016-02-18 15:45:29 -08:00
Joseph Ciurej
6cd76d69c3 Fixed the "+shared" variant in the "hdf5" package. 2016-02-17 11:51:24 -08:00
Joseph Ciurej
0388093f7a Changed the hdf5 "+static" variant to become the "+shared" variant. 2016-02-16 17:33:19 -08:00
Joseph Ciurej
fca7ef2f7b Moved "Triangle" to "triangle" to be more in line with Spack package naming conventions. 2016-02-16 17:23:37 -08:00
Joseph Ciurej
8cab10214e Added the installation files for the "ExodusII" package. 
Added the "+static" variant to "hdf5" to enable "ExodusII" support.
 2016-02-16 16:43:24 -08:00
Joseph Ciurej
09254014b1 Added the installation files for the "TetGen" package. 2016-02-16 13:24:01 -08:00
Joseph Ciurej
3c8bbeafc7 Added the installation files for the "Triangle" package. 2016-02-16 13:01:18 -08:00
Joseph Ciurej
9a6221ea40 Added the installation files for the "ndiff" package. 2016-02-16 12:47:14 -08:00
Joseph Ciurej
db50f52bbc Adding the "Crypto++" package installation files. 2016-02-16 11:40:00 -08:00
Todd Gamblin
9e4671a4b4 Merge pull request #340 from adamjstewart/features/xz 
Remove unnecessary URLs
 2016-02-16 10:24:42 -08:00
Adam J. Stewart
bf162e60f1 Add latest version 2016-02-15 10:53:50 -06:00
Todd Gamblin
d8c0edcc81 Minor code cleanup for gcc. 2016-02-14 14:40:25 -08:00
Todd Gamblin
63911d4165 Merge pull request #354 from eschnett/eschnett/libedit 
libedit depends on ncurses
 2016-02-12 10:33:08 -08:00
Erik Schnetter
8e33cc1ae1 Properly wrap all long lines 2016-02-12 13:11:45 -05:00
Erik Schnetter
77c17e1d92 Since my last patch didn't get traction, here is a new approach to building gcc on Darwin: 
- Add a variant specifying whether to build with binutils, defaulting to true
- Auto-detect whether this is Darwin; if so, set binutils and gold defaults to false, as they don't work on Darwin
- Disable Go, which doesn't build on Darwin
- Clean up handling configure options
 2016-02-12 12:52:47 -05:00
alalazo
247a4bc751 mpich : added back MPI_F90 2016-02-12 12:15:09 +01:00
Massimiliano Culpo
70985170e5 qe : compiled on rhle6 2016-02-12 12:08:31 +01:00
Erik Schnetter
d7f674ce96 libedit depends on ncurses 2016-02-11 14:53:20 -05:00
alalazo
e8704433de espresso : added directories to search path 2016-02-11 18:57:40 +01:00
alalazo
b272a8881b espresso : fixed dependency handling 2016-02-11 18:18:05 +01:00
alalazo
ca3cdb4458 espresso : current working tree 2016-02-11 17:45:09 +01:00
alalazo
157ec210a7 espresso : synchronized with current develop 2016-02-11 13:05:31 +01:00
alalazo
e7454132a2 Merge branch 'develop' of https://github.com/LLNL/spack into packages/espresso 2016-02-11 13:03:47 +01:00
Todd Gamblin
bcf705b85e Merge pull request #432 from RemoteConnectionManager/paraview_fix 
Paraview fix
 2016-02-10 13:59:08 -08:00
Todd Gamblin
e23c260cb0 Merge pull request #402 from epfl-scitas/bugfix/netlib-scalapack 
Bugfix: netlib-scalapack does not work with all versions of python
 2016-02-10 11:40:31 -08:00
Luigi Calori
d7b3ed08ab add variant to select OpenGL2 Paraview backend 2016-02-10 15:40:05 +01:00
Luigi Calori
a1bd65550e fix a reported hash mismatch on netcdf-4.4.0 tar download 2016-02-10 15:17:54 +01:00
Luigi Calori
fe8aca630c add a variant to Qt for make dependency on mesa swlwctable 2016-02-10 14:58:00 +01:00
Luigi Calori
f729cf621a fixing qhull: seems that dependency on cmake is essential when it is used 2016-02-10 13:29:36 +01:00
alalazo
71a25a109a arpack-ng : added package 2016-02-05 11:00:37 +01:00
Todd Gamblin
15324c276f Merge pull request #426 from epfl-scitas/packages/suitesparse 
Added package : SuiteSparse
 2016-02-04 18:08:07 -07:00
alalazo
e2a95d4b50 eigen : added support for SuiteSparse 2016-02-04 16:27:26 +01:00
alalazo
e3a0e1881d suitesparse : basic implementation 2016-02-04 16:00:39 +01:00
alalazo
031c292136 dakota : basic installation 2016-02-04 13:48:21 +01:00
Adam J. Stewart
e1b3c286ef Add url for cmake, simplify url_for_version 2016-02-03 16:28:09 -06:00
Todd Gamblin
f38851b73d Merge remote-tracking branch 'github/pull/99' into develop 
Conflicts:
	var/spack/repos/builtin/packages/cmake/package.py
 2016-02-03 14:24:59 -07:00
Todd Gamblin
72ca311f17 Merge pull request #414 from epfl-scitas/issues/trilinos_385 
fix : trilinos and dependencies
 2016-02-03 11:42:53 -07:00