This package was not setting FFTW when +mklfft was used with +cuda.
Since both were set to 'True', the default build was not linked to
any FFTW, leading to a run time error. It seems MKL support was
conflated with alternative CPU acceleration support. This PR does the
following:
- adds the altcpu variant to specify non-GPU/CPU acceleration
- sets a conflict between +altcpu and +cuda
- sets an FFTW implementation
- sets fltk+xft when +gui to get a decent looking GUI interface
- sets tbb dependency only when +altcpu
- adds dependency on ctffind
- adds variant and dependency on motioncor2
- sets defaults for
- qsub template location
- ctffind location
- motioncor2 location
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
fixes#28259
This commit discard specs from unknown namespaces from the
ones that can be "reused" during concretization. Previously
Spack would just error out when encountering them.
1. Add version 2022.04.17 (new numbering scheme) and update mbuild resource.
2. Branch 'master' is now 'main'.
3. Old rev 10.2019.03 needs a patch for python vs python3.
The parent thread in the process stdout redirection logic on Windows
was closing a file that was being read in child thread, which lead to
error-based termination of the reader thread. This updates the
interaction to avoid the error.
* Add checksum for py-ipywidgets@7.7.0
* Correct py-widgetsnbextension and py-ipython dependencies
* Update widgetsnbextension dependency to 3.6
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Allow requirement to next versions
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Revert ipyhton dependencies
* Add widgetsnbextension@3.6.0 checksum
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* ASP-based solver: allow configuring target selection
This commit adds a new "concretizer:targets" configuration
section, and two options under it.
- "concretizer:targets:granularity" allows switching from
considering only generic targets to consider all possible
microarchitectures.
- "concretizer:targets:host_compatible" instead controls
whether we can concretize for microarchitectures that
are incompatible with the current host.
* Add documentation
* Add unit-tests
* MAINT: Add a debug flag
* MAINT: Apply suggestions from code review
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* openmpi: always require pmix for 4:
`~pmix` is not applicable to version 4+, since it always builds a vendored
copy of pmix (currently 3.2.3).
* pmix: relax version requirements
When the version range was specified, newer versions didn't exist.
Also use normalized spack versions rather than artificial .9.9 /.0.0.
* openmpi: restrict pmix versions
pmix option isn't available for OpenMPI@1, and according to
https://github.com/open-mpi/ompi/issues/7988 , OpenMPI 4.0.1 will not
build with pmix@3.1.5.
* pmix: add newer versions
* OpenMPI: re-express conflicts/configure logic as conditional variants
This relies partly on `self.enable_or_disable` and its ilk to emit an
empty list when the variant isn't applicable.
* ASP-based solver: always consider version of installed packages
fixes#29201
Explicitly add facts for versions of installed software when
using the --reuse option, so that we could consider versions
that are not declared in package.py
The parser is already committing a crime of querying the database for
specs when it encounters a `/hash`. It's helpful, but unfortunately not
helpful when trying to install a specific spec in an environment by
hash. Therefore, consider the environment first, then the database.
This allows the following:
```console
$ spack -e . concretize
==> Starting concretization
==> Environment concretized in 0.27 seconds.
==> Concretized diffutils
- 7vangk4 diffutils@3.8%gcc@10.3.0 arch=linux-ubuntu20.04-zen2
- hyb7ehx ^libiconv@1.16%gcc@10.3.0 libs=shared,static arch=linux-ubuntu20.04-zen2
$ spack -e . install /hyb7ehx
==> Installing libiconv-1.16-hyb7ehxxyqqp2hiw56bzm5ampkw6cxws
...
==> libiconv: Successfully installed libiconv-1.16-hyb7ehxxyqqp2hiw56bzm5ampkw6cxws
Fetch: 0.01s. Build: 17.54s. Total: 17.55s.
[+] /tmp/tmp.VpvYApofVm/store/linux-ubuntu20.04-zen2/gcc-10.3.0/libiconv-1.16-hyb7ehxxyqqp2hiw56bzm5ampkw6cxws
```
