Toyohisa Kameyama
98c0d59a0c
sniffles: fix zlib header lookup directory. ( #13063 )
...
* sniffles: fix zlib header lookup directory.
* use bamtools and zlib to spack installed package.
* remove unneeded patch.
2019-10-21 18:38:05 -05:00
noguchi-k
7b62b64b03
elsi:add CMAKE Fortran MODDIR FLAG for Fujitsu compiler ( #13244 )
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* add CMAKE Fortran MODDIR FLAG for Fujitsu compiler
* elsi:remove extra fix
2019-10-21 18:28:38 -05:00
t-karatsu
0e3e1836ff
arpack-ng: Fixed error that is not compatible with isnan. ( #13246 )
2019-10-21 18:27:39 -05:00
t-karatsu
26141ad489
bpp-core: Clarify 'isnan' function's namespace. ( #13260 )
2019-10-21 18:24:10 -05:00
Michael Kuhn
edf56d8ac4
qt: Fix build for newer versions ( #13262 )
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For some reason, newer versions of qt fail to build because they cannot
find certain system libraries such as libatomic and libdl.
Leaving the qmake compiler set to gcc seems to fix the problem.
Fixes #13221
2019-10-21 18:23:03 -05:00
健美猞猁
26687988eb
New package: Fl ( #12877 )
2019-10-21 12:04:00 -07:00
Massimiliano Culpo
3d77ecd92e
Bootstrap environment modules optimizing for generic architectures ( #13105 )
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fixes #13073
Since #3206 was merged bootstrapping environment-modules was using the architecture of the current host or the best match supported by the default compiler. The former case is an issue since shell integration was looking for a spec targeted at the host microarchitecture.
1. Bootstrap an env modules targeted at generic architectures
2. Look for generic targets in shell integration scripts
3. Add a new entry in Travis to test shell integration
2019-10-21 11:20:05 -07:00
Massimiliano Culpo
498f448ef3
microarchitectures: fix custom compiler versions ( #13222 )
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Custom string versions for compilers were raising a ValueError on
conversion to int. This commit fixes the behavior by trying to detect
the underlying compiler version when in presence of a custom string
version.
* Refactor code that deals with custom versions for better readability
* Partition version components with a regex
* Fix semantic of custom compiler versions with a suffix
* clang@x.y-apple has been special-cased
* Add unit tests
2019-10-21 10:24:57 -07:00
Adam J. Stewart
4ab63c17d5
Fix Python 3.8 build on macOS ( #13338 )
2019-10-21 11:21:47 -05:00
Adam J. Stewart
4d99663ef9
Add latest version of py-cffi ( #13322 )
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* Add latest version of py-cffi
* setup_environment -> setup_build_environment
2019-10-21 11:19:48 -05:00
Adam J. Stewart
038f7b1b66
Add latest version of py-numpy ( #13307 )
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* Add latest version of py-numpy
* setup_environment -> setup_build_environment
2019-10-21 11:19:05 -05:00
Adam J. Stewart
72177b6e97
Add latest version of py-tables ( #13291 )
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* Add latest version of py-tables
* setup_environment -> setup_build_environment
2019-10-21 11:17:52 -05:00
Adam J. Stewart
5090071693
Add latest version of py-torch ( #13290 )
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* Add latest version of py-torch
* setup_environment -> setup_build_environment
2019-10-21 11:17:15 -05:00
Adam J. Stewart
f2d91f7e3c
Use specific version of googletest for uriparser ( #13339 )
2019-10-20 19:08:23 -05:00
Adam J. Stewart
01e64886ac
Tut cannot be built with Python 3.7+ ( #13341 )
2019-10-20 19:08:04 -05:00
Adam J. Stewart
7f2aacfffc
Add latest version of proj ( #13337 )
2019-10-20 17:56:37 -05:00
Adam J. Stewart
030b2f8657
Add missing zlib dependency to openjpeg ( #13336 )
2019-10-20 17:06:43 -05:00
Adam J. Stewart
0cfc88c7d7
openblas: http -> https ( #13335 )
2019-10-20 17:06:30 -05:00
Adam J. Stewart
785d5d9ca3
mapserver: http -> https ( #13334 )
2019-10-20 16:31:55 -05:00
Adam J. Stewart
4789ac956c
liblas: http -> https ( #13331 )
2019-10-20 15:51:35 -05:00
Adam J. Stewart
529d1246f6
libtiff: http -> https ( #13332 )
2019-10-20 15:51:23 -05:00
Adam J. Stewart
b56e46ece8
libgeotiff: http -> https ( #13330 )
2019-10-20 15:51:08 -05:00
Adam J. Stewart
f1e595cb61
Add latest version of libyaml ( #13333 )
2019-10-20 15:50:48 -05:00
Adam J. Stewart
04e999162d
Add latest version of libgcrypt ( #13329 )
2019-10-20 14:45:00 -05:00
Adam J. Stewart
73c5a9c736
Add latest version of googletest ( #13328 )
2019-10-20 14:44:43 -05:00
Adam J. Stewart
1673dc5aeb
GEOS: http -> https ( #13327 )
2019-10-20 14:44:28 -05:00
Adam J. Stewart
c767444f88
Add missing test dependency to py-alabaster ( #13325 )
2019-10-20 14:44:14 -05:00
Adam J. Stewart
a602ed873d
Add latest version of py-typing ( #13287 )
2019-10-20 13:18:02 -05:00
Adam J. Stewart
d462749b59
Add missing dependencies to py-apipkg ( #13324 )
2019-10-20 13:17:44 -05:00
Adam J. Stewart
32879df9d0
Add latest version of py-babel ( #13323 )
2019-10-20 13:17:28 -05:00
Adam J. Stewart
ea90d2b88a
Add latest version of py-chardet ( #13321 )
2019-10-20 11:44:12 -05:00
Adam J. Stewart
d2744a072b
Add latest version of py-click ( #13320 )
2019-10-20 11:43:56 -05:00
Adam J. Stewart
41126d457f
Add latest version of py-execnet ( #13317 )
2019-10-20 11:21:59 -05:00
Adam J. Stewart
1007a0f7e5
Add latest version of py-decorator ( #13318 )
2019-10-20 11:21:46 -05:00
Adam J. Stewart
47831a95e1
Add latest version of py-coverage ( #13319 )
2019-10-20 11:21:32 -05:00
Adam J. Stewart
b421c97110
Add latest version of py-sphinxcontrib-websupport ( #13292 )
2019-10-20 11:21:03 -05:00
Adam J. Stewart
21d14a19f6
Add latest version of py-sphinx ( #13293 )
2019-10-20 11:20:46 -05:00
Adam J. Stewart
2268dd9e8f
Add latest version of py-snowballstemmer ( #13294 )
2019-10-20 11:20:21 -05:00
Adam J. Stewart
a2e7f0e9d2
Add latest version of py-requests ( #13296 )
2019-10-20 11:19:51 -05:00
Adam J. Stewart
35362adb97
Add latest version of py-pyyaml ( #13297 )
2019-10-20 11:19:29 -05:00
Adam J. Stewart
b76f1687fb
Add latest version of py-pytest-xdist ( #13298 )
2019-10-20 11:19:11 -05:00
Adam J. Stewart
f832f12ca6
Add latest version of py-pytest-runner ( #13299 )
2019-10-20 11:18:55 -05:00
Adam J. Stewart
3a2eeedf20
Add latest version of py-pytest-mock ( #13300 )
2019-10-20 11:18:39 -05:00
Adam J. Stewart
4d7226e561
Add latest version of py-pytest-httpbin ( #13301 )
2019-10-20 11:18:04 -05:00
Adam J. Stewart
63dd97f84e
Add latest version of py-pytest-cov ( #13302 )
2019-10-20 11:17:47 -05:00
Adam J. Stewart
03b1af0d96
Add latest version of py-pysocks ( #13303 )
2019-10-20 11:17:27 -05:00
Adam J. Stewart
10065b325d
Add latest version of py-pycparser ( #13304 )
2019-10-20 11:17:11 -05:00
Adam J. Stewart
d4f409ea51
Add latest version of py-psutil ( #13305 )
2019-10-20 11:16:53 -05:00
Adam J. Stewart
04af812e03
Add latest version of py-pip ( #13306 )
2019-10-20 11:16:36 -05:00
Adam J. Stewart
c130a2980f
Add latest version of py-mock ( #13308 )
2019-10-20 11:16:07 -05:00
