Commit graph

14928 commits

Author SHA1 Message Date
Andrew W Elble
1abfebb5e9
py-cython-bbox: new package (#22022)
* py-cython-bbox: new package

* pypi url fix
2021-03-01 19:01:57 +00:00
Mark W. Krentel
14c1d58b5a
binutils: add versions 2.35.2 and 2.36.1 (#22019)
Starting with 2.36, the Makefiles are missing some dependencies for
linking libctf and thus require serial make install.
2021-03-01 08:53:55 -08:00
AMD Toolchain Support
afb7e57d20
ucx: added variants to support IB, mlx etc (#21876)
Co-authored-by: mohan babu <mohbabul@amd.com>
2021-03-01 16:11:37 +01:00
Adam J. Stewart
c529ccaab0
py-geopandas: add v0.9.0 (#22005) 2021-03-01 14:35:16 +01:00
h-denpo
890a93bbcd
gchp: patch for aarch64 (#22010) 2021-03-01 09:06:08 +01:00
Mosè Giordano
62f8087716
libblastrampoline: Add version 3.0.1 (#22002) 2021-02-27 18:31:59 +01:00
Robert Pavel
d5f50203d1
Removed MPI variant from ebms (#21938) 2021-02-27 13:15:57 +01:00
iarspider
5abc7e59d1
Rivet updates and improvements (#21843) 2021-02-27 13:13:08 +01:00
iarspider
edeb6c52f0
Openblas: add experimental BIGNUMA flag (#21393) 2021-02-27 13:06:29 +01:00
Adam J. Stewart
ede100bf16
kcov: elfutils not needed on macOS (#21993) 2021-02-26 19:25:59 -06:00
Satish Balay
a87aa49fbf
petsc/petsc4py/slepc: switch default git branch from 'master' to 'main' (#22001) 2021-02-27 01:17:37 +00:00
Sebastian Mobo
4f84721dc1
boost: Patch B2 bootstrap step to use correct toolchain (#21408) 2021-02-26 17:46:37 -06:00
Andrew W Elble
f2f58b70b1
nccl-tests: respect cuda_arch variant during build (#21995) 2021-02-26 15:38:20 -08:00
Ryan Viertel
f957f1936c
adds flag to turn off NLOPT_OCTAVE in CMAKE when -octave (#21997) 2021-02-26 15:35:09 -08:00
Desmond Orton
5492e549a5
New package r-spades-tools at 0.3.6 (#21783) 2021-02-26 23:25:47 +00:00
eugeneswalker
590457cf7f
amrex: use right cmake_args for @develop; depends_on(hypre) for link (#21892)
* amrex package: use right cmake_args for @develop; depends_on(hypre)

* add explicit depends_on for petsc, for link, when +petsc
2021-02-26 13:53:31 -08:00
mic84
2fd8612f21
amrex: +hypre and +petsc do not need +fortran from version 20.08 (#21994) 2021-02-26 13:52:57 -08:00
Desmond Orton
f22caeca36
Package/r circstats (#21966) 2021-02-26 14:57:56 -06:00
iarspider
1a45bdb036
FastJet: fix patch level (#21936) 2021-02-26 19:21:08 +00:00
Adam J. Stewart
a6396d6190
py-metpy: add new package (#21971) 2021-02-26 18:51:16 +00:00
Olivier Cessenat
2484ed0281
Qscintilla: added v2.12.0, fixed build (#21902) 2021-02-26 18:13:25 +00:00
Olivier Cessenat
5578c07b51
asciidoc: sourceforge a2x needs python2, adds more recent for py3 (#21807)
* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: making python 2.3 to 2.7 able to cope with asciidoc

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3
2021-02-26 10:04:36 -06:00
Adam J. Stewart
046861c4ef
xkbcomp: add v 1.4.4 (#21981) 2021-02-26 15:55:06 +00:00
Dan Lipsa
18f094efe9
sensei: add versions and fix dependencies (#21452)
* Fix sensei@develop

Should work with all options but libsim.
Current releases don't work with ~catalyst
See
https://gitlab.kitware.com/sensei/sensei/-/merge_requests/240
for the fix for develop.
Current releases work only with paraview 5.7 and 5.6
See
https://gitlab.kitware.com/sensei/sensei/-/merge_requests/239
for the fix for develop (which works with 5.9)

* Fix libsim.

* Fix warnings.

* Fix python runtime.

* Many changes:

* Reworked cmake options top use the CMakePackage option helpers
* Simplified and consolidated options
* Replaced adios with adios2 variant
* Added vtkm variant (not yet working)

* paraview: Fix downstream consumers getting the wrong FindMPI

* vtk: Fix downstream consumers getting the wrong FindMPI

* Add +ascent, +adios2; remove +adios; variants off by default

* Fix catalyst python logic

* sensei: cleanup formatting

Co-authored-by: Chuck Atkins <chuck.atkins@kitware.com>
2021-02-26 10:52:41 -05:00
Tomoyasu Nojiri
b6ac3bb6d7
ncl: allow building on aarch64 (#21984) 2021-02-26 15:39:08 +00:00
eugeneswalker
c2784b2d41
amr-wind: new package (#21883)
* amr-wind: new package

* amr-wind: simplify cuda_arch mapping

* simplify
2021-02-26 07:15:08 -08:00
Tomoyasu Nojiri
5900bf6890
warpx: fix typos in a few dependency conditions (#21982) 2021-02-26 11:15:46 +00:00
Harmen Stoppels
459171b973
berkeley-db: do not install docs by default (#21960)
* Add an option to not install 100MB of docs

* Add deprecations of versions that are removed and add conflicts for 5.3
2021-02-26 10:44:14 +01:00
Adam J. Stewart
7cfde8f514
py-xarray: add new variant 'io' (#21945) 2021-02-26 10:41:14 +01:00
Adam J. Stewart
b4520676dd
c-blosc: add v1.21.0 (#21968) 2021-02-26 10:33:39 +01:00
Adam J. Stewart
2e178be890
Python: add new versions (#21969) 2021-02-26 10:31:57 +01:00
Adam J. Stewart
f87f006e7b
py-importlib-resources: add v5.1.0 (#21970) 2021-02-26 10:31:36 +01:00
Adam J. Stewart
229c6ae277
py-pooch: add new package (#21972) 2021-02-26 10:30:18 +01:00
Axel Huebl
46905bb445
openPMD-api: use cmake helpers (#21973)
Modernize the `openpmd-api` package to use fancy new `CMakePackage`
helpers when setting options from variants :-)
2021-02-26 10:29:52 +01:00
Erik Schnetter
f28ca41d02
hwloc: add v2.4.1 (#21978) 2021-02-26 10:19:32 +01:00
h-denpo
19d34b0afa
dbow2: add a dependency on eigen (#21663) 2021-02-26 10:19:03 +01:00
eugeneswalker
e88fc38cfe
hypre: enable cuda variants (#21885) 2021-02-26 10:17:35 +01:00
Harmen Stoppels
27ef9f0e07
CMake: add a "build_type" variant (#21958)
This permits to use MinSizeRel or other build types
where they are a better fit.
2021-02-26 09:49:00 +01:00
ketsubouchi
b13a506090
cpmd: add expected smoke test check output (#21668) 2021-02-26 09:29:10 +01:00
Gregory Lee
6c12b64873
added waylaynd-protocols package (#21979) 2021-02-26 07:24:53 +00:00
Glenn Johnson
c6413c8925
Revert "New package r-circstat@0.2-6 (#21777)" (#21974)
This reverts commit 61c8bc2b19.
2021-02-26 03:39:58 +00:00
Daryl W. Grunau
55eae72bb0
pegtl: manage options to build examples and tests when run_tests (#21866)
Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
2021-02-25 17:06:02 -08:00
Michael Kuron
4453058862
Old concretizer: prevent unexpected propagation of external config (#20976)
When using an external package with the old concretizer, all
dependencies of that external package were severed. This was not
performed bidirectionally though, so for an external package W with
a dependency on Z, if some other package Y depended on Z, Z could
still pull properties (e.g. compiler) from W since it was not
severed as a parent dependency.

This performs the severing bidirectionally, and adds tests to
confirm expected behavior when using config from DAG-adjacent
packages during concretization.
2021-02-25 15:42:40 -08:00
Valentin Churavy
476444c592
[flux-core] add -Wno-errpr=maybe-uninitialized (#21943)
Co-authored-by: Stephen Herbein <SteVwonder@users.noreply.github.com>
2021-02-25 22:55:42 +00:00
Desmond Orton
87dd060c20
New package r-spades-addins at 0.1.2 (#21781) 2021-02-25 22:12:54 +00:00
Andrew W Elble
8071be81c4
py-tensorflow: disable h5py/hdf5 mpi variant(s) if tensorflow is ~mpi (#21955) 2021-02-25 22:08:00 +00:00
eugeneswalker
e8f51c6892
tioga: add variants: +cuda and more (#21884) 2021-02-25 12:47:01 -08:00
Sergey Kosukhin
177117745f
hdf5: drop support for libtool files (#21900) 2021-02-25 20:41:41 +00:00
Michael Kuhn
0754d101d2
meson: add 0.57.1 (#21959) 2021-02-25 20:29:56 +00:00
Harmen Stoppels
e25a7be5b8
openmpi: add perl as a build dependency (#21956) 2021-02-25 19:00:43 +00:00
Axel Huebl
d05e0dfeef
WarpX: CMake (#21787)
* New Package: py-picmistandard

* New Package: py-warpx

* WarpX: Transition to CMake
2021-02-25 19:54:52 +01:00
Adam J. Stewart
62662591ea
py-pydap: add new package (#21948) 2021-02-25 12:13:21 -06:00
Olivier Cessenat
b48de4baa7
harfbuzz: dependency assumed cairo was compiled with +pdf and +ft (#21954) 2021-02-25 17:42:57 +00:00
h-denpo
f0e5c96746
libpulsar: added dependency on curl (#21950) 2021-02-25 13:39:38 +00:00
iarspider
22539f443e
Fix recipe for evtgen 2.0; add variant for hepmc3 (#21814) 2021-02-25 14:13:04 +01:00
Steven Smith
3c26084d2e
gridlab-d: specify xerces prefix (#21867) 2021-02-25 13:59:36 +01:00
ronin-gw
f9f5f8676e
w3m: new package at v0.5.3 (#21641) 2021-02-25 13:42:26 +01:00
Harmen Stoppels
a8808b473a
Update fuse packages (#21901)
Allow libfuse to build without setuid binary and bump versions of both
libfuse and fuse-overlayfs.

Still doesn't solve the issue where this package tries to install things
into /etc/init.d though.
2021-02-25 13:40:01 +01:00
Harmen Stoppels
cf6aeace42
openblas: add perl as a build dependency (#21908) 2021-02-25 13:38:15 +01:00
Harmen Stoppels
a42d5357c3
libxc: add perl as a build dependency (#21906) 2021-02-25 13:34:09 +01:00
Harmen Stoppels
a258d40c28
kcov: add missing dependency (#21932)
kcov CMakeLists.txt generates the "kcov" executable only if
certain dependencies are found. These dependencies are 
"libbfd", "libopcodes" and "libiberty", hence the dependency 
on binutils.
2021-02-25 11:55:56 +01:00
Adam J. Stewart
127a630ba3
py-numcodecs: add v0.7.3, apple clang patch (#21944)
* py-numcodecs: add new version, apple clang patch

* py-numcodecs: add new version, apple clang patch
2021-02-25 11:33:38 +01:00
Adam J. Stewart
719bdb1673
py-cfgrib: new package at v0.9.8.5 (#21946) 2021-02-25 11:32:56 +01:00
Adam J. Stewart
7a3d216318
py-h5netcdf: new package at v0.10.0 (#21947) 2021-02-25 11:32:26 +01:00
Adam J. Stewart
8ec646b6b1
py-webob: new package at v1.8.7 (#21949) 2021-02-25 10:31:33 +00:00
Mosè Giordano
1a11a17453
libblastrampoline: Add version 3.0.0 (#21939) 2021-02-25 05:08:37 +00:00
Desmond Orton
ce5e2b5368
New package r-spades-core at 1.0.5 (#21782) 2021-02-25 05:04:04 +00:00
eugeneswalker
1d7fc4cbe1
llvm-doe+lldb: @doe: fix improper set of LLDB_ENABLE_PYTHON (#21935) 2021-02-24 19:59:12 -08:00
Adam J. Stewart
2b201ba401
Overhaul xgboost packages (#21661)
* Overhaul xgboost packages
* Don't deprecate xgboost 0.90
* Add py-xgboost@0.90, but deprecate it
* extras_require added in 1.0.0
* Deprecate py-dask-xgboost
* Simplify setting cuda arch
2021-02-25 03:42:17 +00:00
Matthijs van Waveren
d55384a46d
libjpeg: add version 9d (#21819)
* Update package libjpeg

* Change order and remove empty line.

* emove space
2021-02-25 03:20:04 +00:00
Adam J. Stewart
79e575067c
font-util: fix typo in default fonts (#21933) 2021-02-25 03:10:27 +00:00
Adam J. Stewart
f74670e210
py-azureml-dataprep: add new version (#21919) 2021-02-25 00:31:05 +00:00
Desmond Orton
e554433ca9
New package r-qs at 0.23.5 (#21779) 2021-02-24 23:12:56 +00:00
Olivier Cessenat
92a4576644
Silo: fix build errors with +silex on ubuntu18.04(#21877) 2021-02-24 15:45:53 -05:00
Rémi Lacroix
d153978fc7
Silo: Update URLs (#21880) 2021-02-24 20:41:04 +00:00
Adam J. Stewart
58241c2bbd
py-azureml-train: add new version (#21929) 2021-02-24 21:15:35 +01:00
Adam J. Stewart
c54f3aca39
py-azureml-train-restclients-hyperdrive: add new version (#21928) 2021-02-24 21:15:24 +01:00
Adam J. Stewart
7e6b3344d8
py-azureml-train-core: add new version (#21927) 2021-02-24 21:15:02 +01:00
Adam J. Stewart
ec81005716
py-azureml-train-automl-client: add new version (#21926) 2021-02-24 21:14:52 +01:00
Adam J. Stewart
7ca5eb8976
py-azureml-telemetry: add new version (#21925) 2021-02-24 21:14:30 +01:00
Adam J. Stewart
64d44f2fa4
py-azureml-sdk: add new version (#21924) 2021-02-24 21:14:12 +01:00
Adam J. Stewart
5506777052
py-azureml-pipeline: add new version (#21923) 2021-02-24 21:13:56 +01:00
Adam J. Stewart
c947b5e43e
py-azureml-pipeline-steps: add new version (#21922) 2021-02-24 21:13:43 +01:00
Adam J. Stewart
d11052603e
py-azureml-pipeline-core: add new version (#21921) 2021-02-24 21:13:29 +01:00
Adam J. Stewart
a470064a6a
py-azureml-dataset-runtime: add new version (#21920) 2021-02-24 21:13:11 +01:00
Adam J. Stewart
ae09be9cdc
py-azureml-dataprep-native: add new version (#21918) 2021-02-24 21:11:39 +01:00
Adam J. Stewart
b9e445cb56
py-azureml-core: add new version (#21917) 2021-02-24 21:11:13 +01:00
Adam J. Stewart
49985316ab
py-azureml-automl-core: add new version (#21916) 2021-02-24 21:10:39 +01:00
Adam J. Stewart
86d3b062fe
py-azureml-dataprep-rslex: add new package (#21915) 2021-02-24 21:10:22 +01:00
eugeneswalker
dff08f327f
libcircle: needs libpciaccess (link dep) (#21648) 2021-02-24 20:35:00 +01:00
eugeneswalker
e3b3faca70
rempi-needs-libpciaccess (link dep) (#21652) 2021-02-24 20:34:22 +01:00
Desmond Orton
369e6e25ac
New package r-rapiserialize at 0.1.0 (#21780) 2021-02-24 19:15:49 +00:00
kuramoto-fj
d65002a676
n2p2: Add new package (#21709)
* n2p2: Add new package

* remove ,

* Resurrection of , and changed " to single

* changed example.command to example.co

* n2p2: Added v2.1.1

* n2p2: Changed the type of depends_on.
2021-02-24 10:35:27 -06:00
Harmen Stoppels
e53595c0dc
Fix target selection in rocfft (#21858) 2021-02-24 10:42:09 +01:00
Harmen Stoppels
4a9c8ec1ad
HIP: document variables, apply patches to older versions, fix build issues (#21852)
Since there are many variables being set I thought it would be a good idea to document them better and slightly simplify the logic for external vs not-external.
2021-02-24 10:37:16 +01:00
Robert Blake
0389f51bd7
numactl: no-op needed if configure can't find TLS (#21894)
* numactl: Bash needs no-op if configure can't find TLS

* Upstream has fix, will be out in next version.

https://github.com/numactl/numactl/pull/103
2021-02-23 19:13:22 -08:00
Desmond Orton
61c8bc2b19
New package r-circstat@0.2-6 (#21777) 2021-02-23 20:57:22 -06:00
Desmond Orton
df3caef9aa
New package r-fastdigest at 0.6-3 (#21778) 2021-02-23 20:54:19 -06:00
Desmond Orton
a7ddaa67de
New version r-stringfish at 0.14.2 (#21785) 2021-02-23 20:16:08 -06:00
Rémi Lacroix
f6b61621e5
Sph2pipe: Update URL (#21886) 2021-02-23 18:13:08 -08:00