Scott Wittenburg
e0572a7d96
Pipelines: Support DAG scheduling and dynamic child pipelines
...
This change also adds a code path through the spack ci pipelines
infrastructure which supports PR testing on the Spack repository.
Gitlab pipelines run as a result of a PR (either creation or pushing
to a PR branch) will only verify that the packages in the environment
build without error. When the PR branch is merged to develop,
another pipeline will run which results in the generated binaries
getting pushed to the binary mirror.
2020-05-14 21:11:07 -07:00
Toyohisa Kameyama
ea818caca3
namd: build on aarch64. ( #16639 )
2020-05-14 20:17:53 -05:00
Robert Blake
b987444871
Fixing the build directory for cardioid. ( #16640 )
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* Fixing the build directory for cardioid.
* These imports are no longer needed due to deletions.
Co-authored-by: Robert Blake <rob.c.blake.3@gmail.com>
2020-05-14 20:16:55 -05:00
Michael Kuhn
5875bc6d6b
scorep: Fix build with gcc@10: ( #16642 )
2020-05-14 20:10:58 -05:00
Andrew W Elble
e21b4731a9
lammps: set LAMMPS_POTENTIALS in the runtime environment ( #16643 )
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so lammps can find the installed potential files
2020-05-14 20:09:41 -05:00
Jen Herting
b562059d2a
New package: maloc ( #16631 )
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* [maloc] created template
* [maloc] added some build dependencies
* [maloc] added homepage and description
* [maloc] added doc variant in an attempt to disable documentation. Still builds doc though... at least when there is a system doxygen found. Having doxygen being a dependency here can bring python in and cause issues for dependents, even when listed as only a build dependency. Maybe this is a bug?
* [maloc] flake8 and fixme removal
* [maloc] shorted description
2020-05-14 20:06:21 -05:00
Andrew W Elble
8c025324af
ucx: cuda / gdrcopy variants ( #16605 )
...
picking up where #15724 left off.
2020-05-14 20:04:06 -05:00
健美猞猁
0ed2fa3b9b
miniforge3: a new package. ( #16644 )
2020-05-14 19:50:11 -05:00
Michael Kuhn
c168e1b85e
at-spi2-core: Add 2.36.0 ( #16645 )
...
The pkg-config file of newer versions of at-spi2-core includes
dependencies for xtst, recordproto, inputproto and fixesproto, so they
have to be available at runtime as well.
2020-05-14 19:49:02 -05:00
Michael Kuhn
670a5e8766
atk: Add 2.36.0 ( #16646 )
2020-05-14 19:48:21 -05:00
Michael Kuhn
232aa9ff2e
at-spi2-atk: Add 2.34.2 ( #16647 )
2020-05-14 19:47:55 -05:00
Amjad Kotobi
0844e56d6d
r-hmisc: new version and updated dependency ( #16649 )
2020-05-14 19:46:02 -05:00
Amjad Kotobi
1eb5a12019
r-survival: new version and updated dependency ( #16650 )
2020-05-14 19:44:35 -05:00
Michael Kuhn
20b3e41831
adios2: Fix build with gcc@10: ( #16570 )
2020-05-13 19:46:13 -07:00
Nathan
48a35409e0
Spack Package for ns-3 ( #16630 )
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* Adding ns3 spack
* Format and cleanup of ns3 spack package
* Removing comments and fixing boost variant
* Fixing formating
2020-05-13 21:16:17 -05:00
Adam J. Stewart
bc948c4418
py-horovod: add new version ( #16635 )
2020-05-13 17:52:27 -05:00
Nathan
c50b586e06
Helics: add python variant ( #16625 )
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* Adding varient for python interface in HELICS
* Append python interface to pythonpath
* cleaning up blank lines
* Update var/spack/repos/builtin/packages/helics/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-05-13 17:25:07 -05:00
Nick Booher
f294c264a1
revbayes: Update checksum ( #16628 )
2020-05-13 12:54:21 -05:00
Toyohisa Kameyama
66b896d286
conda4aarch64:New Package. ( #16617 )
2020-05-13 12:49:42 -05:00
Michael Kuhn
a9ee4da670
ncl: Fix build with gcc@10: ( #16624 )
2020-05-13 12:45:12 -05:00
Amjad Kotobi
9b8082ecf3
r-exactextractr: new package ( #16626 )
2020-05-13 12:42:16 -05:00
Nichols A. Romero
fa57f1da29
QE Update May 2020 ( #16627 )
...
* Clarify comments about QMCPACK-to-QE converter.
* Allow hdf5=serial with QE 6.4.1 + qmcpack, but apply filter_file.
* Ammend comments about the use of the filter_file.
2020-05-13 12:41:16 -05:00
lpritch-lanl
043d507540
py-pint: added versions up to v0.11 ( #16537 )
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Co-authored-by: Lori Pritchett-Sheats <lpritch@pn2002926.lanl.gov>
2020-05-13 16:47:01 +02:00
Michael Kuhn
308f016f31
parallel-netcdf: fix build with gcc@10: ( #16620 )
2020-05-13 16:44:50 +02:00
Amjad Kotobi
f6fbf8b8d3
r-xml2: new version & updated dependencies ( #16604 )
...
* r-xml2: new version & updated dependencies
* r-xml2: updated dependencies
2020-05-13 09:22:53 -05:00
Tomoki, Karatsu
a740c361cd
ppopen-appl-fdm: added support to Fujitsu compilers. ( #16616 )
2020-05-13 15:10:07 +02:00
Toyohisa Kameyama
4777284f08
charmpp: support for aarch64. ( #16619 )
2020-05-13 15:06:25 +02:00
Michael Kuhn
b4052eb3b8
tcsh: fix build with gcc@10: ( #16621 )
2020-05-13 14:57:12 +02:00
Michael Kuhn
aaf3388cfe
esmf: fix build with gcc@10: ( #16622 )
2020-05-13 14:53:49 +02:00
Chris White
fdf38ec991
Fix axom install target ( #16613 )
2020-05-12 16:57:25 -07:00
Pariksheet Nanda
f43b7824ca
py-plotly: unfix dependency versions ( fixes #16544 ) ( #16546 )
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* py-plotly: unfix dependency versions (fixes #16544 )
* py-plotly: add missing dependencies for #16546
* py-plotly: match setup.py instead of requirements.txt for #16546
2020-05-12 17:06:18 -05:00
Justin S
0f2a581276
velvetoptimiser: new package at 2.2.6 ( #16611 )
2020-05-12 17:05:19 -05:00
Amjad Kotobi
ab92407940
r-testthat : dependencies and version updated ( #16576 )
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* r-testthat : dependencies and version updated
* Adding version conditions for dependencies
* r-testthat: Fix dependecies condition
2020-05-12 17:05:01 -05:00
Adam J. Stewart
b4e587bd0b
py-scikit-learn: add new version ( #16607 )
2020-05-12 16:43:56 -05:00
Justin S
1d76067d7a
zstd: add 1.4.4 ( #16608 )
2020-05-12 16:43:43 -05:00
Adam J. Stewart
6b41fb88a9
py-threadpoolctl: add new package ( #16606 )
2020-05-12 14:33:10 -05:00
Nick Booher
9bdf4564db
revbayes: update for 1.1.0 ( #16603 )
...
* revbayes: update for 1.1.0
* revbayes: Fix flake8
2020-05-12 14:26:44 -05:00
Amjad Kotobi
154c0f5771
new version r-rcurl ( #16550 )
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* new version r-rcurl
* RCurl dependency R version updated
* Adding version conditions
2020-05-12 11:42:58 -05:00
Amjad Kotobi
78d8dd0815
new version r-cli ( #16553 )
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* new version r-cli
* r-cli : dependencies updated
* Adding version conditions for dependencies
2020-05-12 11:42:20 -05:00
Amjad Kotobi
bfa707dfc4
new version r-ellipsis ( #16556 )
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* new version r-ellipsis
* r-ellipsis : R dependency updated
* Adding version conditions for dependencies
2020-05-12 11:41:41 -05:00
Amjad Kotobi
d4c8c8b80d
r-rematch2 : new package ( #16563 )
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* r-rematch2 : new package
* Updating URL
2020-05-12 11:41:20 -05:00
Amjad Kotobi
b99a5369ce
r-roxygen : dependencies and version updated ( #16565 )
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* r-roxygen : dependencies and version updated
* Dependencies updated for condition
2020-05-12 11:40:55 -05:00
Amjad Kotobi
7528e1eb45
r-purrr : dependencies and version update ( #16566 )
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* r-purrr : dependencies and version update
* Dependencies updated for condition
2020-05-12 11:39:39 -05:00
Amjad Kotobi
173823e77d
r-rversions : new package ( #16572 )
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* r-rversions : new package
* URL updated r-rversions
2020-05-12 11:39:08 -05:00
Amjad Kotobi
14b80ecaf2
r-withr : dependencies and version updated ( #16577 )
...
* r-withr : dependencies and version updated
* Adding version conditions for dependencies
2020-05-12 11:36:25 -05:00
Amjad Kotobi
7c327ed447
r-knitr : dependencies and version updated ( #16579 )
...
* r-knitr : dependencies and version updated
* Adding version conditions for dependencies
2020-05-12 11:35:41 -05:00
Tomoki, Karatsu
278f8eb7fe
modylas: Add flag to use preprocessor when building with Fujitsu compiler. ( #16598 )
2020-05-12 11:34:28 -05:00
Jose E. Roman
8b06bd7198
New patch release SLEPc 3.13.2 ( #16601 )
2020-05-12 11:33:46 -05:00
Andrew W Elble
e36aa96392
py-horovod: link dependency for py-torch ( #16600 )
...
fix for same reasons as #16495 .
2020-05-12 11:24:30 -05:00
Toyohisa Kameyama
7813e41464
caffe: fixed build error ( #16520 )
...
* opencv 3.2 requires cmake 3.11 or older.
caffe dependency is changed.
* revert opencv variant to caffe.
backport to opencv errors.
2020-05-12 09:39:19 -05:00
