Commit graph

5568 commits

Author SHA1 Message Date
Javier
0c4e97b6a1 New package - r-rzmq (#2414)
* New package - r-rzmq

* Adding homepage
2016-11-26 16:47:47 -08:00
Javier
7baa6e824b New package - r-irdisplay (#2413) 2016-11-26 16:47:38 -08:00
Javier
cc0d08255c New package - r-hexbin (#2412) 2016-11-26 16:47:25 -08:00
Andrey Prokopenko
8f0b91edaa netcdf: multiple improvements (#2377)
- Added 'dap' and 'cdmremote' variants
  This is based on work in #2324 with the following motivation:
      Turn off DAP support by deafult.  DAP requires curl, which has issues
      with circular dependencies.  For 95% of NetCDF users that do not need
      DAP, turning it off avoides this rats nest of problems.
- Added 'parallel-netcdf' variant
  To support work with parallel-netcdf
- Added 'shared' and 'static' build separation
2016-11-24 13:52:28 -08:00
George Hartzell
cde8f697a9 Bugfix/update go packages (#2369)
* Update go-bootstrap package

The last C based Go src tree was the 1.4 series.  For a while they
were cutting new releases so that people could bootstrap from a C only
system.  Now they're recommending that you either use the release-1.4
branch or that you use a date-stamped tarball that they'll produce on
an as-needed basis.

There are several issues that keep 1.4.2 from building on a CentOS 7
system.

I've switched to the date based tarball.

The cgo bits were also mis-behaving, but they're not needed for the
bootstrapping task so I've set an environment variable that disables
them.

Details [on the install-from-source
page](https://golang.org/doc/install/source#go14) and these issues:

- https://github.com/golang/go/issues/17545
- https://github.com/golang/go/issues/16352.

* Update go package

Switched from pulling from the git repository to using the source
tarballs and added digest values.

Added support for 1.7.3, continued supporting 1.6.2, including patches
for a couple of problems (details in
[17545](https://github.com/golang/go/issues/17545) and
[17986](https://github.com/golang/go/issues/17986).

Dropped support for 1.5.4 and 1.4.2 because they no longer pass their
tests and the patches above to not apply.
2016-11-24 12:25:51 -08:00
Andrey Prokopenko
11bfccd53f Adding pic_flag property to compilers (#2375)
Different compilers have different flags for PIC (position-independent
code). This patch provides a common ground to accessing it inside specs.

See discussions in #508 and #2373. This patch does not address the issue
of mixed compilers as mentioned in #508.
2016-11-24 12:25:22 -08:00
scheibelp
261d36e801 Add dynamic search option for package sources (#2270)
Package provides a 'list_url' attribute which may be searched to find
download links. #1822 created a slowdown for all tests by always
searching this URL. This reenables dynamic search only in cases where
all other fetchers fail. This also only enables dynamic search when
'mirror_only' is set to false.
2016-11-24 12:21:05 -08:00
Javier
9c267e9c73 Updated version - r-lattice (#2410) 2016-11-24 12:19:42 -08:00
Javier
09a5826903 New package - r-testit (#2409) 2016-11-24 12:19:10 -08:00
Javier
f4fc670ab4 New package - r-highr (#2408) 2016-11-24 12:19:05 -08:00
Javier
bb3239903b New package - r-knitr (#2407) 2016-11-24 12:19:01 -08:00
Javier
8949e67ce3 New package - r-gistr (#2406) 2016-11-24 12:18:57 -08:00
Javier
85638aad03 New package - r-formatr (#2405)
* New package - r-formatr

* Block comment should start with '# '
2016-11-24 12:18:47 -08:00
Javier
4214281ab3 New package - r-evaluate (#2404) 2016-11-24 12:18:41 -08:00
Gregory Lee
96bc3ff8f6 added qt variants for pyqt to build (#2389) 2016-11-23 14:10:12 -08:00
Jon Rood
a6db0bfae2 Updating SuperLU package file with ability to build version 4.3. (#2390)
* Updating SuperLU package file with ability to build version 4.3 (before they added cmake) with external blas or internal blas, and added capability to build the latest version 5.2.1 (with cmake) with internal blas.

* Updating SuperLU package file with suggested changes, i.e. reorganizing installation methods based on version, adding cmake dependency when necessary, removing any use of internal blas, and also adding fpic variant.

* Fixing flake8 failures.
2016-11-23 13:26:00 -08:00
Javier
c3aa5443b9 Adding R library r-bitops (#2382) 2016-11-23 13:24:35 -08:00
Adam J. Stewart
e60bccd95c Fix indentation for newly created packages (#2391) 2016-11-23 10:58:13 -08:00
Javier
7bda4e98b3 New package - r-catools (#2394)
* New package - r-catools

* Splitting lines to pass flake8 travis test
2016-11-23 10:57:47 -08:00
Javier
b085ce9e94 New package - r-partykit (#2395)
* New package - r-partykit

* Splitting lines to pass flake8 travis test
2016-11-23 10:57:23 -08:00
Javier
0eddf8421d New package - r-formula (#2396) 2016-11-23 10:56:59 -08:00
Javier
d6710a6aaf New package - r-deoptim (#2397) 2016-11-23 10:56:37 -08:00
Javier
74e6db9060 New package - r-c50 (#2393)
* Adding R library r-bitops

* New package - r-c50
2016-11-23 10:56:13 -08:00
Jon Rood
f8d038c0b8 New package yaml-cpp (#2399)
* Adding new package for yaml-cpp.

* Removing gcc specific c++11 flag. Adding fpic variant. Fixing formatting.
2016-11-23 10:54:22 -08:00
Matthew Scott Krafczyk
1fbe67af3d Update flex package url's and versions (#2384)
* Update flex package url's and versions

The old sourceforge page for flex is now defunct. While version 2.6.0
still downloads fine, later versions are no longer hosted there.
Development continues on github. I've adjusted urls to point to this
new location.

In addition, from 2.6.0 onwards, a new naming scheme for releases seems
to have been adopted. I've created a url_for_version function to sort
this out.

* Change flex to an AutotoolsPackage

Also move the url_for_version function to the end of the package
definition.

* Implement the autoreconf function for flex
2016-11-22 14:30:25 -08:00
Adam J. Stewart
f351e4402c Update external distro package to 1.0.1 (#2381) 2016-11-22 14:01:01 -08:00
Todd Gamblin
1901b05b9c Forgot http:// in tutorial link. 2016-11-22 01:24:48 -08:00
Todd Gamblin
c394046971 Fix broken doc links. 2016-11-22 00:55:04 -08:00
becker33
5e73266572 Merge pull request #2291 from ax3l/topic-icet
Packages: Add IceT
2016-11-21 14:27:17 -08:00
becker33
294ad3e818 Merge pull request #2343 from krafczyk/features/better_diagnostics
Improve diagnostics to ease debugging
2016-11-21 14:22:26 -08:00
becker33
760bca3048 Merge pull request #2376 from aprokop/misprint_fix
llvm-lld: minor misprint fix
2016-11-21 14:12:44 -08:00
Andrey Prokopenko
3954fc8545 llvm-lld: minor misprint fix 2016-11-21 16:22:31 -05:00
Glenn Johnson
a8e40bf803 intel-parallel-studio: fix location of MKL libs 2016-11-18 23:16:47 +01:00
Matthew Krafczyk
f1b26cb72e Improve stacktrace printing
Sometimes files in the stacktrace are not from spack. Remove these
files before finding the spack root.
2016-11-17 12:51:41 -05:00
Matthew Krafczyk
de7171db8a Use better scheme for getting root directory 2016-11-16 12:14:25 -05:00
Matthew Krafczyk
6c854246aa Fix some formatting errors caught by flake8. 2016-11-16 11:58:36 -05:00
Matthew Krafczyk
8e6d890a19 -s now includes the file and line number with info
The option -s now causes file and line number information to be printed
along with any invocation of msg, info, etc...

This will greatly ease debugging.
2016-11-16 11:58:36 -05:00
Denis Davydov
a5fb33b0e4 python: symlink lib64/python2.7/lib-dynload/ to lib/python2.7/lib-dynload/ (#2295) 2016-11-16 07:29:08 -07:00
Todd Gamblin
2611cbed40 Move tutorial slides to external link and stop using git LFS (#2341)
- Seems like older git versions won't be able to clone an LFS repo.

- Reverting to an external link for the slides to avoid storing an 8MB
  file in the repo and to avoid using git LFS.
2016-11-15 14:11:26 -07:00
Todd Gamblin
2fcac22e66 Add tutorial link to README 2016-11-14 18:35:21 -07:00
Todd Gamblin
85a05681cc Add SC16 tutorial to the Spack docs. (#2334) 2016-11-14 18:23:30 -07:00
Todd Gamblin
bdd1069a9e Add SC16 tutorial to the Spack docs. 2016-11-14 18:08:21 -07:00
becker33
93287b950b Merge pull request #1547 from citibeth/efischer/160816-PyPathspec
py-pathspec: New package
2016-11-14 15:13:21 -08:00
Axel Huebl
4b82d881dc
Add Package: IceT
Adds the IceT compositing library from Sandia/Kitware.
Most default functionality needed for image compositing is
added, OpenGL acceleration for very large displays is disabled.

Downstream usage:
  most VTK based software which supports parallel image compositing,
such as VisIt, Paraview and in our use-case
[ISAAC](https://github.com/ComputationalRadiationPhysics/isaac).
2016-11-13 16:50:14 -07:00
becker33
b13b253ced Edited/fixed basic usage tutorial (#2329)
* Colify compiler output

* Edited/fixed basic usage tutorial

* fix console spacing.
2016-11-13 09:29:32 -07:00
Massimiliano Culpo
103a98a468 fake install: mock include directory (#2294) 2016-11-13 04:45:50 -07:00
Massimiliano Culpo
7e93a0e5f1 install: fixed choices for --only (removed the default) fixes #2303 (#2308) 2016-11-13 04:45:29 -07:00
Kelly Thompson
05c6c40e36 Force the recipe for Lua to use the spack compiler. (#2299)
* Force the recipe for Lua to use the spack compiler.

I'm not sure how the old recipe worked for anyone. The Lua Makefiles set
`CC=gcc` and for my spack environment the first `gcc` found in my `PATH` is
`$SPACK_ROOT/lib/spack/env/gcc`, which is a directory. This caused the build
to fail. My change drops the `-std=gnu99`, but this option doesn't appear
to be required for a sucessful build.

* Preserve the '-std=gnu99' compile option.
2016-11-12 21:46:59 -07:00
Elizabeth Fischer
8c0c3263e2 Simplify the CMake build to make it more robust. (#2325)
* Simplify the CMake build to make it more robust.

* ncurses on by default.
2016-11-12 21:26:40 -07:00
Todd Gamblin
a5934fcaa6 Remove automake dep in libelf. (#2328) 2016-11-12 21:25:14 -07:00