pabloaledo
af8c392de2
fq: add new package ( #39205 )
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Signed-off-by: Pablo <pablo.aledo@seqera.io>
2023-08-09 06:23:44 -04:00
Jonathon Anderson
9aa3b4619b
containerize: ensure bootstrap images contain all system dependencies ( #36818 )
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This also makes `spack bootstrap status` exit 1 if some dependency is missing
2023-08-09 09:46:59 +02:00
Cristian Di Pietrantonio
3d733da70a
idg: add new package ( #39316 )
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Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 02:45:34 -05:00
Cristian Di Pietrantonio
cda99b792c
miniocli: add new package ( #39318 )
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Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-08-09 03:43:29 -04:00
Gerhard Theurich
9834bad82e
esmf: specify build dependency on CMake when using internal ParallelIO ( #39347 )
2023-08-09 09:14:28 +02:00
Peter Scheibel
3453259c98
Spec versions: allow git. references for branches with / ( #38239 )
2023-08-09 09:07:04 +02:00
Adam J. Stewart
ee243b84eb
py-lightly: add v1.4.15 ( #39348 )
2023-08-09 09:01:41 +02:00
Adam J. Stewart
5080e2cb45
py-torchmetrics: add v1.0.3 ( #39349 )
2023-08-09 09:01:23 +02:00
Cristian Di Pietrantonio
f42ef7aea7
ior: add lustre variant ( #39320 )
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Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 08:59:21 +02:00
Jon Rood
41793673d9
hypre: fix typo in --with-sycl option. ( #39351 )
2023-08-09 08:37:15 +02:00
Cristian Di Pietrantonio
8b6a6982ee
caliper: add KOKKOS variant. ( #39312 )
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Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-08-09 08:35:56 +02:00
Cristian Di Pietrantonio
ee74ca6391
beast2: add dependency on libbeagle. ( #39311 )
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Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 08:33:53 +02:00
Cristian Di Pietrantonio
7165e70186
chgcentre: fix compilation error by using explicit casting ( #39315 )
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Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 08:32:58 +02:00
Massimiliano Culpo
97d632a161
Push conflict between rocm and blt down to packages that actually use blt ( #39339 )
2023-08-09 07:53:17 +02:00
Alec Scott
571919992d
go: add v1.20.6 and v1.19.11, deprecate previous versions due to CVE-2023-29405 ( #39149 )
2023-08-08 16:38:21 -07:00
snehring
99112ad2ad
Update py-gtdbtk to 2.3.2 ( #39296 )
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* fastani: adding version 1.34 and changing build_system
* py-gtdbtk: adding version 2.3.2
* fastani: adding requested changes
* py-gtdbtk: adding requested changes
* fastani: remove conditional
2023-08-08 18:33:56 -05:00
Paul Kuberry
75c70c395d
trilinos: Add version 14.4.0 ( #39340 )
2023-08-08 18:48:23 -04:00
Jen Herting
960bdfe612
[py-model-index] new package ( #39301 )
2023-08-08 17:20:37 -05:00
Jen Herting
97892bda18
[py-opendatalab] New package ( #39302 )
2023-08-08 17:19:18 -05:00
Jen Herting
cead6ef98d
[py-linkify-it-py] New package ( #39305 )
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* [py-linkify-it-py] New package
* [py-linkify-it-py] Added version 1.0.3
2023-08-08 17:13:11 -05:00
eugeneswalker
5d70c0f100
e4s ci: add libpressio ( #34222 )
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* e4s ci: add libpressio
* libpressio ~cuda, +cuda: add +mgard
2023-08-08 12:03:23 -07:00
Adam J. Stewart
361632fc4b
Ensure that all variants have a description ( #39025 )
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* Ensure that all variants have a description
* Update mock packages too
* Fix test invocations
* Black fix
* mgard: update variant descriptions
* flake8 fix
* black fix
* Add to audit tests
* Relax type hints
* Older Python support
* Undo all changes to mock packages
* Flake8 fix
2023-08-08 09:29:49 -05:00
simonLeary42
6576655137
Name clash error message include hash of clashing packages ( #39234 )
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Co-authored-by: Simon <simonleary@umass.edu>
2023-08-08 14:36:49 +02:00
Mikael Simberg
feb26efecd
hpx: add v1.9.1 ( #39336 )
2023-08-08 05:28:04 -04:00
Mikael Simberg
4752d1cde3
pika-algorithms: add v0.1.4 ( #39335 )
2023-08-08 05:23:10 -04:00
Paul Kuberry
a07afa6e1a
OpenMPI: require compilers for F77 and "modern" Fortran ( #39266 )
2023-08-08 11:10:27 +02:00
Adam J. Stewart
7327d2913a
ML CI: get more packages working on macOS ( #39199 )
2023-08-08 10:59:24 +02:00
Axel Huebl
8f8a1f7f52
C-Blosc2: add v2.10.1 ( #39297 )
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This adds the latest C-Blosc2 release, the first to add CMake
CONFIG install files for easier downstream usage of the installed
library and CMake targets.
2023-08-08 10:08:12 +02:00
Carlos Bederián
eb8d836e76
aocc: add v4.1.0 ( #39280 )
2023-08-08 10:07:12 +02:00
Jen Herting
bad8495e16
parallel-hashmap: add new package ( #39299 )
2023-08-08 10:03:01 +02:00
Cristian Di Pietrantonio
43de7f4881
plumed: add v2.9.0, v2.8.3 ( #39324 )
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Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-08 09:59:03 +02:00
Hariharan Devarajan
84585ac575
cpp-logger: add new package ( #39303 )
2023-08-08 09:27:44 +02:00
Harmen Stoppels
86f9d3865b
Fix broken inode assertion ( #39188 )
2023-08-08 09:21:23 +02:00
Adam J. Stewart
834e7b2b0a
py-cartopy: add v0.22.0 ( #39309 )
2023-08-08 08:53:04 +02:00
shanedsnyder
c14f23ddaa
Add darshan 3.4.4 release ( #39310 )
2023-08-08 08:49:27 +02:00
Sinan
49f3681a12
package:py-wand add build env var, add new version ( #39281 )
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* package:py-wand add build env var, add new version
* fix style
* [@spackbot] updating style on behalf of Sinan81
* improve
* improve
---------
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
Co-authored-by: Sinan81 <Sinan81@users.noreply.github.com>
2023-08-07 19:45:48 -05:00
Jen Herting
19e1d10cdf
[py-marshmallow] added version 3.19.0 ( #38972 )
2023-08-07 19:44:44 -05:00
Jen Herting
7caf2a512d
[py-srsly] added version 2.4.6 ( #38970 )
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* [py-srsly] added version 2.4.6
* [py-srsly] added dependency on py-catalogue
* [py-srsly] added conflict on newer versions of py-cython
2023-08-07 19:44:34 -05:00
Jen Herting
1f6e3cc8cb
[py-pathy] new package ( #38968 )
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* [py-pathy] new package
* [py-pathy] removed lines for unsupported versions of python
2023-08-07 19:41:21 -05:00
Jen Herting
169c4245e0
[py-gensim] added version 4.3.1 ( #38272 )
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* [py-gensim] added version 4.3.1
* [py-gensim] flake8
* [py-gensim] removed version limitation on py-cython
2023-08-07 18:56:53 -05:00
Jen Herting
ee1982010f
[py-clean-text] added version 0.6.0 ( #38271 )
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* [py-clean-text] added missing dependency on py-poetry
* [py-clean-text] added version 0.6.0
* [py-clean-text] Made required changes
2023-08-07 18:52:22 -05:00
Melven Roehrig-Zoellner
dd396c4a76
freeglut: set correct library name ( #39300 )
2023-08-07 19:08:08 -04:00
Jean Luca Bez
235802013d
h5bench: include tests for E4S and new version ( #37830 )
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* include tests for h5bench
* update to new test format
* update path
* improve description and detect MPI runner
* fix test name
* Include new release
* update with corrections
* include SLURM dependency and reduce test to one process
* fixes on filters
* fix on oversubscribe
* suggested fixes
---------
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-08-07 11:43:32 -07:00
Harmen Stoppels
e1f07e98ae
libdeflate: new versions, switch to cmake ( #39062 )
2023-08-07 13:48:12 -04:00
Adam J. Stewart
60aee6f535
py-torchmetrics: add v1.0.2 ( #39274 )
2023-08-07 10:43:43 -07:00
Adam J. Stewart
2510dc9e6e
py-timm: add v0.9.5 ( #39275 )
2023-08-07 10:42:14 -07:00
Christopher Christofi
5607dd259b
samtools: add 1.17 ( #39287 )
2023-08-07 10:29:03 -07:00
Harmen Stoppels
7bd5d1fd3c
use {%compiler.name}{@compiler.version} in matching_specs ( #39247 )
2023-08-07 18:54:10 +02:00
Harmen Stoppels
f6104cc3cb
spack: bump package ( #39184 )
2023-08-07 18:52:14 +02:00
kwryankrattiger
b54d286b4a
CI: remove redundant sections ( #38514 )
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Refactor gitlab ci configs so that mac and cray jobs can reuse as much higher level
configuration as possible.
* CI: remove redundant sections
* CI: Include base linux CI configs in cray stacks
Relocation and runner mapping is consistent between cray and linux runners.
* Export user cache path in before script
* CI: add GPG root for mac runners
* Disable user configs
Metal runners share a ~ directory
* Disable user config and add configs in activate env
2023-08-07 10:23:16 -06:00
