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1295 commits

Author SHA1 Message Date
Massimiliano Culpo
cfc25d0a92 Merge branch 'develop' into openmpi_variants 2016-05-02 18:26:05 +02:00
Adam J. Stewart
c110865bf2 Remove OpenMPI dependency on hwloc 2016-05-02 11:06:33 -05:00
Adam J. Stewart
b99c8b641a Add hydra package 2016-05-02 11:06:33 -05:00
Todd Gamblin
1b731e525f Merge pull request #703 from epfl-scitas/fixes/openssl_external 
fix : no warning when installing 'openssl@external'
 2016-04-28 10:25:35 -07:00
Todd Gamblin
b75a3e112b Merge pull request #855 from citibeth/efischer/160427-OpenblasFix 
openblas: Added +fpic variant to package.
 2016-04-28 10:19:36 -07:00
Elizabeth F
71ca837ada Add '+fpic' variant. 2016-04-27 20:36:41 -04:00
Elizabeth F
62d806d512 hdf5: Set preferred version, so as to not break NetCDF (for now). 2016-04-27 19:03:26 -04:00
Elizabeth F
ee6a75c9b5 Added missing -lpthread to OpenBLAS check. 
See: https://github.com/xianyi/OpenBLAS/wiki/faq#static_link
 2016-04-27 18:44:54 -04:00
Todd Gamblin
92afa52eec Merge pull request #804 from jppelteret/features/paradiseo 
Added package for Paradiseo.
 2016-04-26 13:00:09 -07:00
Todd Gamblin
d1a9328793 Merge pull request #824 from adamjstewart/features/ior 
Add IOR benchmark package
 2016-04-26 12:48:57 -07:00
Todd Gamblin
1d2916da8c Merge pull request #829 from davydden/openblas_unit_test 
openblas: a small unit test to make sure Lapack symbols are compiled
 2016-04-26 10:47:35 -07:00
Todd Gamblin
7fc69a6b51 Merge pull request #838 from davydden/dealii_dependencies 
dealii: add missing dependencies
 2016-04-26 10:34:00 -07:00
Todd Gamblin
237c843621 Merge pull request #837 from davydden/p4est_dependencies 
p4est: add missing dependencies
 2016-04-26 10:33:46 -07:00
Todd Gamblin
ef0fefc506 Merge pull request #836 from davydden/astyle_fix 
astyle: fix installation of the binary
 2016-04-26 10:33:24 -07:00
Todd Gamblin
9fb514ff81 Merge pull request #828 from glennpj/csvkit 
Add py-csvkit package
 2016-04-26 10:32:27 -07:00
Glenn Johnson
dfc0efa8ed Put f2py of py-numpy in python ignore list. (#827) 
There are many python packages that depend on py-numpy. Each one of
those will have a copy of f2py that will need to be put in the ignore
list for activation. Thise PR adds f2py to the ignore list in the python
package.py file so that it does not have to be done for each package
that depends on py-numpy. This follows the model of what is done for
py-setuptools.

This PR also removes the f2py ignore expression for python packages
that were using it as it is no longer needed in the individual packages.
 2016-04-26 10:32:14 -07:00
Glenn Johnson
b56bfcea96 Add the turbomole package. (#826) 
* Add the turbomole package.
This package has three modes of operation that need to be selected
independently. This is handled with spack vaiants. Turbomole has a builtin MPI
implementation so it does not need to depend on an mpi provider when using the
+mpi variant.

* Whitespace cleanup.
 2016-04-26 10:31:48 -07:00
Joseph Ciurej
8ec5e81186 Update Package : Zoltan (#833) 
* Added preliminary implementations for the debug and shared variants.

* Fixed a few problems with the '+shared' variant of the Zoltan package.
Added support for a few more important Zoltan package versions.

* Fixed a minor compiler incompatibility issue with the '+shared+mpi' variants.
 2016-04-26 10:24:36 -07:00
jppelteret
8e227f603d Fix: Add missing dependencies for gmp and eigen (#830) 
See https://groups.google.com/forum/#!topic/spack/9JMDwafjBUs
 2016-04-26 10:01:09 -07:00
Geoffrey Oxberry
f70046e6b7 MFEM version 3.1 (#749) 
MFEM is a free, lightweight, scalable C++ library for finite element
methods.

Includes lapack, hypre, metis, suite-sparse, mpi variants & tests for
serial and parallel versions.
 2016-04-26 10:00:24 -07:00
Denis Davydov
0ff4120692 dealii: add missing dependencies 2016-04-26 15:06:21 +02:00
Denis Davydov
8a45aa4185 p4est: add missing dependencies 2016-04-26 12:52:49 +02:00
Denis Davydov
168f9c46ea astyle: fix installation of the binary 2016-04-26 09:18:39 +02:00
Jean-Paul Pelteret
17b7305086 Added package for Paradiseo. 2016-04-26 09:12:27 +02:00
Denis Davydov
dd37959899 output with new lines 2016-04-25 16:21:19 +02:00
Denis Davydov
42be50d10b add a test/output pair 2016-04-25 13:53:41 +02:00
Denis Davydov
b81cb554f5 openblas: a small unit test to make sure Lapack symbols are compiled 2016-04-25 13:30:20 +02:00
Glenn Johnson
4e671c54ee Reformat the description. 2016-04-24 18:06:51 -05:00
Glenn Johnson
797af2e80f Add py-csvkit package 
This adds the py-csvkit package and needed dependencies for working with
csv files.
 2016-04-24 17:39:49 -05:00
Adam J. Stewart
a7ffffc336 Change homepage, explicitly disable 2016-04-24 17:14:33 -05:00
Adam J. Stewart
22e4ee5604 Add OSU Micro-Benchmarks package (#822) 
* Add OSU Micro-Benchmarks package

* Add workaround for GCC bug
 2016-04-23 13:29:47 -07:00
Ben Boeckel
e32416430c Update git (#819) 
* git: update to 2.8.0 final and add 2.8.1

* git: hard-depend on curl and expat

HTTP-based cloning is very prevalent now.
 2016-04-23 12:18:58 -07:00
Elizabeth Fischer
248248c6b2 Added package: NCView (#791) 
* ncview: Added package

* Removed FIXMEs
 2016-04-23 12:15:53 -07:00
Erik Schnetter
4e062d86b4 Refine wget's OpenSSL configuration options (#786) 2016-04-23 12:15:32 -07:00
Joseph Ciurej
d701d2ccf3 Updated the Swig package file to include versions for all of the popular Swig releases. (#790) 2016-04-23 12:15:14 -07:00
Adam J. Stewart
e7d2fa7084 Add IOR benchmark package 2016-04-22 12:30:24 -05:00
Ben Boeckel
5c4bb69af9 xerces-c: update to 3.1.3 (#811) 
The 3.1.2 tarball seems to have gone missing. Also switch to using bz2
rather than gz to reduce the download size.
 2016-04-21 19:29:20 -07:00
Denis Davydov
ef9347bcfb dealii: set DEAL_II_DIR when loading a module (#816) 2016-04-21 19:25:17 -07:00
Kelly Thompson
dd84a57580 + On some systems, Dia also requires intltool. (#768) 2016-04-17 07:15:47 +02:00
Ben Boeckel
63bade7a0c metis: fix OS X install (#764) 
Without this, the binaries use relative paths for loading which causes
them to not be found when running binaries. Not sure why the existing
hack wasn't working, but this fixes it the proper way.
 2016-04-17 07:15:07 +02:00
Erik Schnetter
375de085e2 Make PAPI build on Darwin (#772) 
* Make PAPI build on Darwin

- don't use <malloc.h>
- run install_name_tool

* Use fix_darwin_install_name
 2016-04-17 07:14:34 +02:00
Erik Schnetter
fb4f361cd0 Update to version 4.1.0 (#785) 2016-04-17 07:12:52 +02:00
Kelly Thompson
523be30974 + Add CMake version 3.5.2. (#787) 2016-04-17 07:11:19 +02:00
Erik Schnetter
a25e33d96e Create lib directory 2016-04-17 06:50:15 +02:00
Todd Gamblin
69f8d8fa7a Merge pull request #783 from adamjstewart/features/elk 
Add Elk package
 2016-04-14 18:34:03 +02:00
Adam J. Stewart
cf1914fc00 Also install species directory 2016-04-14 10:18:06 -05:00
Todd Gamblin
a73b7052c9 Merge branch 'osx-fixes' of git://github.com/mathstuf/spack into mathstuf-osx-fixes 2016-04-14 15:25:24 +02:00
Todd Gamblin
9e456acbab Merge pull request #779 from LLNL/bugfix/binutils-deps 
binutils depends on flex and bison.
 2016-04-14 15:23:35 +02:00
Todd Gamblin
01fab24c15 binutils depends on flex, bison, and m4 2016-04-14 11:47:35 +02:00
Todd Gamblin
d6a232dbe0 Merge pull request #767 from mathstuf/paraview-fixes 
Paraview fixes
 2016-04-14 11:29:46 +02:00