Massimiliano Culpo
1a12ddbd2d
Add a warning on Python 2.7 deprecation ( #33052 )
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Co-authored-by: alalazo <alalazo@users.noreply.github.com>
Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
2022-10-06 23:42:34 +02:00
snehring
f43887dd4e
ncbi-toolkit: adding version 26_0_1 ( #33061 )
2022-10-06 12:26:25 -07:00
Sergey Kosukhin
a520a7ef28
tcl module template: automatically unload automatically loaded modules ( #32853 )
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Remove `module-info mode load` condition that prevents auto-unloading when autoloading is enabled. It looks like this condition was added to work around an issue in environment-modules that is no longer necessary.
Add quotes to make is-loaded happy
2022-10-06 20:15:28 +02:00
iarspider
c3018f95ee
Add checksum for py-executing 1.0.0 ( #33059 )
2022-10-06 10:25:54 -06:00
iarspider
164d5fc7a4
Add checksum for py-histogrammar 1.0.31 ( #33045 )
2022-10-06 09:52:38 -05:00
iarspider
38b50079e1
Add checksum for py-uhi 0.3.1 ( #33043 )
2022-10-06 09:51:28 -05:00
iarspider
e67a19cb36
Add checksum for py-tqdm 4.64.1 ( #33046 )
2022-10-06 09:50:24 -05:00
iarspider
7e1cb5414c
Add checksum for py-zipp@3.8.1 ( #33048 )
2022-10-06 09:47:56 -05:00
iarspider
5c5de3e683
Update py stack data ( #33051 )
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* Add checksum for py-traitlets 5.3.0
* Add checksum for py-stack-data 0.5.0
* Remove extra file
2022-10-06 09:41:16 -05:00
Laurent Aphecetche
ca0e023c43
geant4-vmc: unset MACOSX_DEPLOYMENT_TARGET ( #32828 )
2022-10-06 10:41:08 -04:00
Sergey Kosukhin
70a3868168
ncl: enable building with recent versions of hdf5 ( #32842 )
2022-10-06 16:20:55 +02:00
iarspider
f168a44fcb
Add checksum for py-urllib3 1.26.12 ( #33019 )
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* Add checksum for py-urllib3 1.26.12
* Update var/spack/repos/builtin/packages/py-urllib3/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Fixes from review
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-10-06 07:38:00 -06:00
Harmen Stoppels
c959d6c905
gmake: add 4.3.90 alpha release ( #33044 )
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GNU Make 4.3.90 supports jobserver through fifo, so it's nice to add the
alpha release to Spack already.
2022-10-06 04:34:00 -06:00
Manuela Kuhn
4cfe58651a
py-docutils: add 0.19 ( #32814 )
2022-10-06 04:29:48 -06:00
eugeneswalker
a56cd8ffb6
e4s ci: add charliecloud ( #32990 )
2022-10-06 12:22:23 +02:00
Sreenivasa Murthy Kolam
5cf05b6515
mlirmiopen: update the SHA for 5.2.1 release ( #33049 )
2022-10-06 03:54:03 -06:00
Harmen Stoppels
fc5da74998
docs: fix deprecated use of install_tree ( #33004 )
2022-10-06 09:45:46 +00:00
iarspider
0bc23d8bdc
Add checksum for py-markupsafe 2.1.1 ( #33003 )
2022-10-06 03:42:01 -06:00
iarspider
5fc0bef4fc
Add checksum for py-avro 1.11.1 ( #32979 )
2022-10-06 03:26:07 -06:00
iarspider
0184f008f1
Add checksum for py-autopep8 1.7.0, py-pycodestyle 2.9.1 ( #32978 )
2022-10-06 03:22:06 -06:00
Mark W. Krentel
e8dcfcd7ae
hpcviewer: add v2022.10 ( #33041 )
2022-10-06 03:18:04 -06:00
dependabot[bot]
bfd848089f
build(deps): bump actions/checkout from 3.0.2 to 3.1.0 ( #32998 )
2022-10-06 02:58:13 -06:00
Wouter Deconinck
887dd3fcd9
dd4hep: add v1.23 ( #32968 )
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Release notes at https://github.com/AIDASoft/DD4hep/releases/tag/v01-23
2022-10-06 10:57:09 +02:00
iarspider
96daaa359d
Add checksum for py-soupsieve 2.3.2.post1 ( #32980 )
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* Add checksum for py-soupsieve 2.3.2.post1
* Update package.py
* Update var/spack/repos/builtin/packages/py-soupsieve/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-10-06 02:53:58 -06:00
Jen Herting
1f5729644b
New package: py-scanpy ( #32565 )
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* [py-scanpy] New package
* [py-scanpy] Added types
* [py-scan] reworked dependencies
* [py-scanpy] flake8
* [py-scanpy] update import
* [py-scanpy] fixed minor issues
Co-authored-by: James A Zilberman <jazrc@rit.edu>
2022-10-06 10:27:37 +02:00
iarspider
aab5bcf05a
Add checksum for py-histoprint 2.4.0 ( #33017 )
2022-10-06 02:22:00 -06:00
iarspider
0ae46519ba
Add checksum for py-hepdata-lib 0.10.1, py-hepdata-validator 0.3.3 ( #33018 )
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* Add checksum for py-hepdata-lib 0.10.1, py-hepdata-validator 0.3.3
* Update package.py
* Update package.py
* Update package.py
* Update package.py
2022-10-06 02:14:06 -06:00
Vanessasaurus
270a19504b
flux-core: add v0.44.0 ( #33039 )
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Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2022-10-06 02:10:11 -06:00
snehring
6de5f58026
dock: fix compilation with gcc10+, add dep ( #33034 )
2022-10-06 09:57:14 +02:00
Jean Luca Bez
33b1425add
h5bench: update version ( #33000 )
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Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-10-06 09:48:09 +02:00
Jen Herting
071c323b95
New package: py-pprintpp ( #30764 )
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* New package: py-pprintpp
* [py-pprintpp] added dependency on setuptools
Co-authored-by: Viv Eric Hafener <vehrc@sporcbuild.rc.rit.edu>
2022-10-06 09:46:32 +02:00
Andrew W Elble
28de7da0cc
cuda: add v11.8.0 ( #33027 )
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Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2022-10-06 09:46:01 +02:00
Vanessasaurus
791776cece
flux-sched: add v0.25.0 ( #33038 )
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Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2022-10-06 09:41:15 +02:00
Chris White
9ba102c2bb
add blt 0.5.2 ( #33029 )
2022-10-06 00:02:04 -06:00
Jen Herting
c5d62294b2
New package: py-pyassimp ( #30762 )
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* New package: py-pyasimp
* Cleaned up dependencies
* Fixed liked issue
* Fixed linked issue
* [py-pyassimp] depends on assimp
* [py-pyassimp] added dependency on py-setuptools
* [@spackbot] updating style on behalf of qwertos
Co-authored-by: Viv Eric Hafener <vehrc@sporcbuild.rc.rit.edu>
Co-authored-by: qwertos <qwertos@users.noreply.github.com>
2022-10-05 21:43:29 -05:00
Harmen Stoppels
189baa96db
python: don't accidentally link to system db libs ( #33007 )
2022-10-05 18:22:01 -06:00
snehring
4b17d9b92e
salmon: new version 1.9.0 ( #33035 )
2022-10-05 17:10:00 -06:00
Charles Ferenbaugh
21ca17a157
pfunit: fix @4: ~openmp ( #33024 )
2022-10-05 17:03:18 -06:00
iarspider
5b45ffb353
Add checksum for py-threadpoolctl 3.1.0 ( #33012 )
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* Add checksum for py-threadpoolctl 3.1.0
* Update package.py
2022-10-05 16:54:04 -06:00
iarspider
143faeee0e
Add checksum for py-distlib 0.3.6 ( #33009 )
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* Add checksum for py-distlib 0.3.6
* Update package.py
* Update package.py
* Update package.py
2022-10-05 16:32:56 -06:00
dlkuehn
b4df99376d
Package jsonnet: change sha256sum to sha256 for version hash ( #33031 )
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Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
2022-10-05 14:40:59 -07:00
Daryl W. Grunau
b2c2958acc
eospac: support version 6.5.5 ( #33023 )
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Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
2022-10-05 14:08:27 -07:00
snehring
881571c4ba
canu: new version 2.2 ( #32999 )
2022-10-05 15:06:08 -06:00
Glenn Johnson
aef6d4a40a
add version 4.2.1 of R ( #32993 )
2022-10-05 13:40:45 -07:00
Adam J. Stewart
760294b402
py-matplotlib: add v3.6.0, new backends ( #32697 )
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* py-matplotlib: add v3.6.0, new backends
* [@spackbot] updating style on behalf of adamjstewart
* Undo conditional variant hack
* Update dependencies
Co-authored-by: adamjstewart <adamjstewart@users.noreply.github.com>
2022-10-05 13:36:37 -07:00
Charles Ferenbaugh
417760e829
Fix wonton CMake config to not break host codes ( #33026 )
2022-10-05 14:06:12 -06:00
MichaelLaufer
e0b418f288
py-pyfr: add v1.15.0, explicitly set env variables for dependencies ( #32964 )
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* Update to PyFR v1.15.0
* allow unsupported compilers for cuda
* update requirement for py-gimmik version
* update requirement for cuda version
* update versions, style fix
* lib directory changed, style fixes
* PYFR_METIS_LIBRARY_PATH set
2022-10-05 14:08:37 -05:00
eugeneswalker
1fe8387d23
e4s ci: add gotcha cpu ( #32989 )
2022-10-05 11:43:13 -07:00
Adam J. Stewart
d956da95c3
py-torch-nvidia-apex: ~cuda does not build ( #32939 )
2022-10-05 12:38:21 -05:00
Axel Huebl
4ed963dda1
OpenBLAS 0.3.21: w/o Fortran ( #32398 )
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There is a new OpenBLAS release out that can be compiled w/o
a Fortran compiler.
macOS XCode developers, rejoice. Maybe at some point Spack
becomes a package manager that can be used without using
another package manager (to get gfortran) 🎉
phist: add conflict on reference netlib-lapack due to API change in lapack.h
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2022-10-05 11:30:09 -06:00
