Commit graph

31796 commits

Author SHA1 Message Date
Adam J. Stewart
c560053c39
py-scipy: add v1.11.0 (#38546)
Co-authored-by: adamjstewart <adamjstewart@users.noreply.github.com>
2023-06-26 11:30:06 +02:00
Fabien Bruneval
5b0ca6d287
MOLGW: add new package (#37878) 2023-06-26 11:12:03 +02:00
is-a-gamer
887d356e01
bzip2: add pkg-config file (#38355)
Co-authored-by: HongZhi He <a13041902330@outlook.com>
2023-06-26 05:02:23 -04:00
Tamara Dahlgren
95ca9dea89
libxml2: convert to new stand-alone test process (#37694) 2023-06-25 01:02:33 -04:00
Cyrus Harrison
cb23362b7f
ascent: add optional occa dep (#38426)
Co-authored-by: cyrush <cyrush@users.noreply.github.com>
2023-06-24 23:32:34 -04:00
George Young
42c4a8b388
gmap-gsnap: updating to 2023-06-01 (#38428)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-06-24 16:46:37 +02:00
Thomas Madlener
cc1f403385
circe2: add new package (#38491) 2023-06-24 16:32:15 +02:00
snehring
b1d281f197
apptainer: add squashfuse dep (#38499) 2023-06-24 16:02:51 +02:00
Tamara Dahlgren
29a1c418b3
etsf-io: convert to new stand-alone test process (#35746) 2023-06-24 15:59:48 +02:00
Wouter Deconinck
36dd325187
gaudi: new versions 36.[11-14] (#38498) 2023-06-24 15:56:02 +02:00
Tamara Dahlgren
585e150816
hpctoolkit: convert to new stand-alone test process (#35752) 2023-06-24 15:44:14 +02:00
miheer vaidya
9a30ba1a4d
clp and osi depend on pkgconfig (#31505)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-06-24 15:34:56 +02:00
David Huber
d5bb152165
GSI-ncdiag: add v1.1.0 and v1.1.1. (#38196)
Co-authored-by: [David Huber] <[david.huber@noaa.gov]>
2023-06-24 15:29:01 +02:00
Stephen Sachs
0c6d0541f0
Fix syntax to set default target in aws-pcluster pipelines (#38048)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-06-24 15:25:19 +02:00
Dennis Klein
7b977dc103
libzmq: Fix static assertion failure with gcc-13 (#38391) 2023-06-24 13:13:17 +02:00
Matthew Thompson
f98bfebce4
pfunit: fix the max_array_rank variant definition (#38528) 2023-06-24 11:01:21 +02:00
Kapil Arya
4907315079
DMTCP: add v3.0.0. (#38307) 2023-06-24 11:00:20 +02:00
Richard Berger
48168de1cc
lammps: new verisons (#38532) 2023-06-24 10:49:18 +02:00
Gurkirat Singh
d99892e490
Fixes openmpi configure args for multinode execution on slurm (#38403)
Remove `--enable-mca-no-build=btl-uct` check for ucx spec
as it is already fixed in the openmpi open-mpi/ompi#6666
2023-06-24 10:40:43 +02:00
Chris Green
09d9b48957
range-v3: remove overbroad boost dependence (#38539)
Co-authored-by: greenc-FNAL <greenc-FNAL@users.noreply.github.com>
2023-06-24 10:25:39 +02:00
Stephen Hudson
62aa9d87ee
libEnsemble: add v0.10.0 (#37954)
* libEnsemble: add v0.10.0

* Make new deps required

* Fixes to deps

* Update var/spack/repos/builtin/packages/py-libensemble/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Fix build, run

* Reorder required deps

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-23 15:16:53 -05:00
Manuela Kuhn
0470fe545f
py-pytest: add 7.3.2 (#38522)
* py-pytest: add 7.3.2

* [@spackbot] updating style on behalf of manuelakuhn

* Swap py-importlib-metadata dependency order

* Restrict python version for older versions
2023-06-23 15:07:38 -05:00
mschouler
db8bf333d3
Add recipe for iterative-stats (#38039)
* Add recipe for iterative-stats

* Fix branch name and remove comment

* Add git link

* Add package maintainer

* Enforce multiple requested changes

* Update var/spack/repos/builtin/packages/py-iterative-stats/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update checksum

* Fix openturns dependency specification

* Add python variant spec to openturns

---------

Co-authored-by: Marc Schouler <marc.schouler@inria.fr>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-23 15:07:04 -05:00
julian-zeidler
f73c8f2255
Added version 0.33 (#38534) 2023-06-23 14:17:38 -04:00
G-Ragghianti
42ed4d81b7
fix version dependency logic (#38535) 2023-06-23 11:08:56 -07:00
Harmen Stoppels
e76b039997
zlib-ng: add latest, default to drop in replacement of zlib (#37370) 2023-06-23 14:02:38 -04:00
Gurkirat Singh
b49d098e3f
Add numa variant in ucx package (#38423) 2023-06-23 07:08:09 -04:00
Harmen Stoppels
cd67b2a1a9
spack buildcache sync (--manifest-glob <glob> | <src> <dest>) are mutually exclusive (#38533) 2023-06-23 12:20:48 +02:00
Manuela Kuhn
a076548bd4
py-pytz: add 2023.3 (#38525) 2023-06-22 23:03:28 -04:00
Juan Miguel Carceller
3d342ac69a
py-qmtest: add patch for the removed bdist_wininst class (#38253)
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-06-22 22:48:24 -04:00
Manuela Kuhn
88fc8ae591
py-python-gitlab: add 3.15.0 (#38524) 2023-06-22 22:43:15 -04:00
Paul R. C. Kent
ff6ac42812
Add 1606 (#38511) 2023-06-22 16:14:25 -07:00
snehring
c96f93b2a3
Emblmygff3 (#38515)
* py-bcbio-gff: adding new version 0.7.0

* emblmygff3: adding new package

* emblmygff3: adding py-setuptools dep
2023-06-22 16:50:11 -05:00
Alec Scott
cbe4a48291
rust: Add v1.70.0 and simplify package bootstrap (#38311)
* Add rust v1.70.0 and simplify package logic by moving bootstrap to dedicated package

* Fix formatting of rust-bootstrap package file

* Re-enable Rust as extendable

* Add nightly version to rust and rust-bootstrap

* Manually inject openssl certs into environment

* Add master and beta versions to rust

* Add additional documentation for using rust development releases

* Remove @AndrewGaspar as maintainer
2023-06-22 14:03:52 -07:00
Manuela Kuhn
ebd41134fe
py-packaging: add 23.1 (#38417) 2023-06-22 16:29:49 -04:00
AMD Toolchain Support
77817a0f05
VASP package: Zen4 Support (#36800)
* zen4 support for vasp
* encourage openmp support in fftw/blas when +openmp
* enable gamma and non-collinear builds
2023-06-22 16:08:21 -04:00
Michael Kuhn
590d3ba6cf
freefem: add missing dependencies (#38290)
Also remove the custom `autoreconf` method as it does not seem to be
necessary and potentially hides useful output provided by the default.
2023-06-22 11:48:00 -07:00
Manuela Kuhn
1e8988f11d
py-notebook: add 6.5.4 (#38415)
* py-notebook: add 6.5.4

* [@spackbot] updating style on behalf of manuelakuhn

* Update var/spack/repos/builtin/packages/py-notebook/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Fix version of py-nbclassic dependency

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-22 12:14:38 -04:00
Ondřej Čertík
a889669cbc
Add LFortran (#30901)
It installs the LFortran runtime library and
LFortran can compile codes to binaries. The interactive mode does not
work yet with LLVM > 11, that has to be fixed upstream.

Co-authored-by: Wileam Y. Phan <50928756+wyphan@users.noreply.github.com>
2023-06-22 09:51:29 -06:00
Manuela Kuhn
fde33e66be
py-numexpr: add 2.8.4 (#38416) 2023-06-22 07:53:43 -04:00
mschouler
6314ddacf2
open turns: Add libxml2 dependency and increase version to v1.20 (#38038)
* Add libxml2 dependency and increase version to v1.20

* Update var/spack/repos/builtin/packages/openturns/package.py

Co-authored-by: Alec Scott <alec@bcs.sh>

* Add v19

* Add libxml2 variant

* Fix variant specification

---------

Co-authored-by: Marc Schouler <marc.schouler@inria.fr>
Co-authored-by: Alec Scott <alec@bcs.sh>
2023-06-22 06:27:59 -04:00
Manuela Kuhn
f935f36b21
py-platformdirs: add 3.5.3 (#38435)
* py-platformdirs: add 3.5.3

* py-typing-extensions: add 4.6.3
2023-06-22 05:54:17 -04:00
Manuela Kuhn
082934f73f
py-prompt-toolkit: add 3.0.38 (#38472) 2023-06-22 04:04:23 -04:00
Manuela Kuhn
3e9e01e496
py-patsy: add 0.5.3 (#38433) 2023-06-22 04:04:00 -04:00
Wouter Deconinck
2abbfe719d
qt: new version 5.15.10 (#38489)
No changes to the build system, no changes to `package.py` needed.

Changelog: https://github.com/qt/qtbase/compare/v5.15.9-lts-lgpl...v5.15.10-lts-lgpl

Main change taking up space:
- bundled 3rdparty/pcre2 updated from 10.39 to 10.40 (spack now includes 10.42, and we don't put specific version requirements in `package.py`)
2023-06-22 03:43:58 -04:00
Mikael Simberg
ace20c5d29
hpx: Add conflict with some GCC versions and +rocm due to valarray bug (#38297)
* hpx: Add conflict with some GCC versions and +rocm due to valarray bug

https://gcc.gnu.org/bugzilla/show_bug.cgi?id=103022

* remove conflict for %gcc@11.1.0 since there is none

---------

Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
2023-06-22 03:38:45 -04:00
Adam J. Stewart
f35fcee6be
py-pyproj: add v3.6.0 (#38399) 2023-06-22 03:14:08 -04:00
Manuela Kuhn
103370d84a
py-networkx: add 3.1 (#38377)
* py-networkx: add 3.1

* Update var/spack/repos/builtin/packages/py-networkx/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Add default variant

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-22 03:09:13 -04:00
Wouter Deconinck
6e47f1645f
opencascade: typo in True (#38487)
Not sure why flake8 didn't catch this as an undefined name, e.g. https://www.flake8rules.com/rules/F823.html.
2023-06-22 02:39:20 -04:00
Seth R. Johnson
53eb6c46db
Add VecGeom 1.2.3 and mark old versions as deprecated (#38483)
Co-authored-by: Ben Morgan <drbenmorgan@users.noreply.github.com>
2023-06-22 02:38:59 -04:00