Massimiliano Culpo
5cd28847e8
filter_file uses "surrogateescape" error handling ( #12765 )
...
From Python docs:
--
'surrogateescape' will represent any incorrect bytes as code points in
the Unicode Private Use Area ranging from U+DC80 to U+DCFF. These
private code points will then be turned back into the same bytes when
the surrogateescape error handler is used when writing data. This is
useful for processing files in an unknown encoding.
--
This will allow us to process files with unknown encodings.
To accommodate the case of self-extracting bash scripts, filter_file
can now stop filtering text input if a certain marker is found. The
marker must be passed at call time via the "stop_at" function argument.
At that point the file will be reopened in binary mode and copied
verbatim.
* use "surrogateescape" error handling to ignore unknown chars
* permit to stop filtering if a marker is found
* add unit tests for non-ASCII and mixed text/binary files
2019-10-14 20:35:14 -07:00
Greg Becker
3f46f03c83
bugfix: install --only dependencies works in env ( #13090 )
...
* bugfix: install --only dependents works in env
includes regression testing
2019-10-14 17:50:38 -07:00
Satish Balay
a63e64f1c4
py-petsc4py: add version 3.12.0 ( #13209 )
...
* py-petsc4py: add version 3.12.0
* fix typo wrt maintainer
2019-10-14 15:27:28 -05:00
William F Godoy
dafee9df31
Complete cleanup of the adios2 package configuration ( #13107 )
...
Provide up to date specs for build options
Remove non-production versions
Format using autopep8 and flake8
Separate cmake options in adios2 2.4.0 version
Keep default as True as much as possible
Support for Python 2 and 3 for adios2 versions <= 2.4.0
Starting v2.5.0 only Python 3 is supported
Addressing review suggestions
2019-10-14 12:47:55 -07:00
Hadrien G
be8f8856ce
New ACTS versions ( #12484 )
...
* Add new ACTS releases
* Update ACTS dependency requirements
* We can actually be more specific here
* The material plugin is gone as of ACTS v0.10.0
* Add 0.10.4 release
* Remove material mapping plugin
It was merged into core as of 0.10.x, and given ACTS' youth it is unlikely to have actual users at this point in time.
2019-10-14 14:01:53 -05:00
wspear
48b7370265
py-pymongo: added new package at version 3.9.0 ( #13132 )
2019-10-14 20:57:54 +02:00
Todd Gamblin
385d2bf3fa
commands: add resource stats to spack url stats ( #13205 )
...
`spack url stats` now also looks at packages' resources when outputting
statistics.
Example:
```
$ spack url stats
==> URL stats for 3531 packages:
--------------------------------------------------------------
stat versions % resources %
--------------------------------------------------------------
url 8335 89.3% 339 89.0%
schemes
https 6489 69.5% 93 24.4%
ftp 32 0.3% 8 2.1%
http 1763 18.9% 237 62.2%
file 51 0.5% 1 0.3%
checksums
md5 26 0.3% 0 0.0%
sha256 8306 89.0% 336 88.2%
no checksum 3 0.0% 3 0.8%
--------------------------------------------------------------
go 1 0.0% 0 0.0%
--------------------------------------------------------------
hg 7 0.1% 0 0.0%
--------------------------------------------------------------
no code 4 0.0% 0 0.0%
--------------------------------------------------------------
svn 4 0.0% 16 4.2%
--------------------------------------------------------------
git 981 10.5% 26 6.8%
branch 442 4.7% 4 1.0%
commit 362 3.9% 14 3.7%
no ref 36 0.4% 2 0.5%
tag 141 1.5% 6 1.6%
--------------------------------------------------------------
```
2019-10-14 08:58:01 -07:00
wspear
8a1e5f68f4
py-alembic: fixed missing dependencies. ( #13127 )
2019-10-14 10:53:01 +02:00
Jeffrey Salmond
2bb1bae2ae
dialign: added new package at version 2.2.1 ( #13130 )
...
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
2019-10-14 10:49:31 +02:00
Justin S
c851cfd122
py-smart-open: new package at 1.8.4 ( #13135 )
2019-10-14 10:42:49 +02:00
Adam J. Stewart
e1cf35a82b
Fix svn tests, skip if svnadmin not found ( #13137 )
2019-10-14 10:40:20 +02:00
wspear
bdcf9ba5cd
py-python-memcached: added new package at version 1.59 ( #13133 )
...
* Added package py-python-memcached, a dependency of python-oauth2
* Fixed line lengths
2019-10-14 10:35:41 +02:00
wspear
04af0eb5a2
py-redis: added new package at version 3.3.8 ( #13134 )
2019-10-14 10:34:37 +02:00
Adam J. Stewart
27ad28e51a
Add py-kiwisolver 1.1.0 ( #13170 )
2019-10-13 22:26:49 -07:00
Satish Balay
846daa0404
amrex: add version 19.10 ( #13206 )
2019-10-13 19:57:11 -05:00
Satish Balay
20c2fa62aa
slepc: use spack specified python in configure ( #13207 )
2019-10-13 19:56:27 -05:00
Satish Balay
1f29785b88
omega-h: add version 9.29.0 ( #13208 )
2019-10-13 19:54:41 -05:00
Adam J. Stewart
ce6bf5fba1
Add apr-util 1.6.1 ( #13145 )
2019-10-13 19:52:58 -05:00
Adam J. Stewart
c121ddb300
Add apr 1.7.0 ( #13146 )
2019-10-13 19:52:40 -05:00
Adam J. Stewart
7b21ac3188
Add bison 3.4.2 ( #13147 )
2019-10-13 19:52:10 -05:00
Adam J. Stewart
30c5f88255
Add freetype 2.10.1 ( #13149 )
2019-10-13 19:51:53 -05:00
Adam J. Stewart
518a7c5bb9
Add libpng 1.6.37 ( #13153 )
2019-10-13 19:51:04 -05:00
Adam J. Stewart
b3fcfc1cb2
Add lz4 1.9.2 ( #13155 )
2019-10-13 19:50:44 -05:00
Adam J. Stewart
48cd455cc1
Add mercurial 5.1.2 ( #13156 )
2019-10-13 19:50:19 -05:00
Adam J. Stewart
e5d1810bec
Add subversion 1.12.2 ( #13158 )
2019-10-13 19:49:53 -05:00
Adam J. Stewart
143afbd3a0
Add py-attrs 19.2.0 ( #13163 )
2019-10-13 19:49:29 -05:00
Adam J. Stewart
4b2b548981
Add py-cython 0.29.13 ( #13166 )
2019-10-13 19:49:07 -05:00
Adam J. Stewart
2884a862e8
Add py-docutils 0.15.2 ( #13167 )
2019-10-13 19:47:25 -05:00
Adam J. Stewart
83a96755ef
Add py-joblib 0.14.0 ( #13169 )
2019-10-13 19:47:07 -05:00
Adam J. Stewart
e72c20bc47
Add py-more-itertools 7.2.0 ( #13171 )
2019-10-13 19:46:13 -05:00
Adam J. Stewart
d61743561b
Add py-pillow 6.2.0 ( #13175 )
...
* Add py-pillow 6.2.0
* Flake8 fix
2019-10-13 19:45:23 -05:00
Adam J. Stewart
ec3b891714
Add py-py 1.8.0 ( #13177 )
2019-10-13 19:44:08 -05:00
Adam J. Stewart
f7b3524765
Add py-pyflakes 2.1.1 ( #13178 )
2019-10-13 19:43:50 -05:00
Adam J. Stewart
1276a182b6
Add py-pygments 2.4.2 ( #13179 )
2019-10-13 19:43:34 -05:00
Adam J. Stewart
8c2096aac5
Add py-pyparsing 2.4.2 ( #13180 )
2019-10-13 19:43:14 -05:00
Adam J. Stewart
d6f6c41d58
Add py-pytz 2019.3 ( #13182 )
2019-10-13 19:42:55 -05:00
Adam J. Stewart
2835e9bf17
Add py-setuptools-scm 3.3.3 ( #13183 )
2019-10-13 19:42:35 -05:00
Adam J. Stewart
ea4f9ebbde
gmp: fix make check on catalina ( #13201 )
2019-10-12 20:21:45 -05:00
Adam J. Stewart
08d448bc54
mpfr: fix make check on catalina ( #13200 )
2019-10-12 20:21:23 -05:00
Adam J. Stewart
41e0b069d7
Fix external numpy package support ( #13197 )
2019-10-12 20:21:03 -05:00
Adam J. Stewart
3df6b05c04
Add py-setuptools 41.4.0 ( #13184 )
2019-10-12 20:20:41 -05:00
Adam J. Stewart
ebfd06d248
Add py-pytest 5.2.1 ( #13181 )
2019-10-12 20:18:31 -05:00
Adam J. Stewart
328583decc
Add py-pluggy 0.13.0 ( #13176 )
2019-10-12 20:14:12 -05:00
Adam J. Stewart
2ced690efb
Add py-pandas 0.25.1 ( #13174 )
2019-10-12 20:12:41 -05:00
Adam J. Stewart
50e9dc5e2e
Add py-packaging 19.2 ( #13173 )
2019-10-12 20:12:19 -05:00
Adam J. Stewart
101c287e7b
Add py-numexpr 2.7.0 ( #13172 )
2019-10-12 20:11:57 -05:00
Adam J. Stewart
db4d06f953
Add py-importlib-metadata 0.23 ( #13168 )
2019-10-12 20:08:33 -05:00
Adam J. Stewart
1d7eab10ac
Add py-certifi 2019.9.11 ( #13165 )
2019-10-12 20:05:00 -05:00
Adam J. Stewart
a59e77e374
Add missing test dependency to py-bottleneck ( #13164 )
2019-10-12 20:04:34 -05:00
Adam J. Stewart
1078dfb6cc
Add py-atomicwrites 1.3.0 ( #13162 )
2019-10-12 20:03:01 -05:00
